RNA–Protein interactions for RNA: ENST00000541795.1

RAB6A-208, Transcript of RAB6A, member RAS oncogene family, humanhuman

TSL 2

Gene RAB6A, Length 1,812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6A-208ENST00000541795 TMEM70Q9BUB7 260 aa12.62□□□□□ -0.39
RAB6A-208ENST00000541795 NBEAL2Q6ZNJ1 2754 aa12.61□□□□□ -0.39
RAB6A-208ENST00000541795 TCAPO15273 167 aa12.61□□□□□ -0.39
RAB6A-208ENST00000541795 RPL32P62910 135 aaKnown RBP12.61□□□□□ -0.39
RAB6A-208ENST00000541795 PYY3Q5JQD4 70 aa12.61□□□□□ -0.39
RAB6A-208ENST00000541795 A0A096LNJ9 63 aa12.6□□□□□ -0.39
RAB6A-208ENST00000541795 IGHV4-28A0A0C4DH34 117 aa12.6□□□□□ -0.39
RAB6A-208ENST00000541795 SDHAF1A6NFY7 115 aa12.6□□□□□ -0.39
RAB6A-208ENST00000541795 LEPROTL1O95214 131 aa12.6□□□□□ -0.39
RAB6A-208ENST00000541795 HBDP02042 147 aa12.6□□□□□ -0.39
RAB6A-208ENST00000541795 P0DMU3 169 aa12.6□□□□□ -0.39
RAB6A-208ENST00000541795 FAM231AP0DMU4 169 aa12.6□□□□□ -0.39
RAB6A-208ENST00000541795 FAM231CP0DMU5 169 aa12.6□□□□□ -0.39
RAB6A-208ENST00000541795 MIFP14174 115 aa12.6□□□□□ -0.39
RAB6A-208ENST00000541795 POLR2KP53803 58 aaKnown RBP12.6□□□□□ -0.39
RAB6A-208ENST00000541795 LAGE3Q14657 143 aa12.6□□□□□ -0.39
RAB6A-208ENST00000541795 KRTDAPP60985 99 aa12.59□□□□□ -0.39
RAB6A-208ENST00000541795 JOSD1Q15040 202 aaPredicted RBP12.59□□□□□ -0.39
RAB6A-208ENST00000541795 NEGR1Q7Z3B1 354 aa12.59□□□□□ -0.39
RAB6A-208ENST00000541795 LINC00518Q8N0U6 118 aa12.59□□□□□ -0.39
RAB6A-208ENST00000541795 Q8NAQ8 132 aa12.59□□□□□ -0.39
RAB6A-208ENST00000541795 VCYO14598 125 aa12.58□□□□□ -0.4
RAB6A-208ENST00000541795 LINC00612Q8N6U2 182 aa12.58□□□□□ -0.4
RAB6A-208ENST00000541795 HSPB8Q9UJY1 196 aa12.58□□□□□ -0.4
RAB6A-208ENST00000541795 TRBV27A0A0K0K1C4 114 aa12.58□□□□□ -0.4
RAB6A-208ENST00000541795 LYRM9A8MSI8 78 aa12.58□□□□□ -0.4
RAB6A-208ENST00000541795 K7EMI3 77 aa12.58□□□□□ -0.4
RAB6A-208ENST00000541795 DEFB4AO15263 64 aa12.58□□□□□ -0.4
RAB6A-208ENST00000541795 PRB2P02812 416 aaPredicted RBP12.58□□□□□ -0.4
RAB6A-208ENST00000541795 DEFB130BP0DP73 79 aa12.58□□□□□ -0.4
RAB6A-208ENST00000541795 DEFB130AP0DP74 79 aa12.58□□□□□ -0.4
RAB6A-208ENST00000541795 FCER1GP30273 86 aa12.58□□□□□ -0.4
RAB6A-208ENST00000541795 KPRPQ5T749 579 aaPredicted RBP12.58□□□□□ -0.4
RAB6A-208ENST00000541795 LINC00173Q6ZV60 143 aa12.58□□□□□ -0.4
RAB6A-208ENST00000541795 C12orf57Q99622 126 aa12.58□□□□□ -0.4
RAB6A-208ENST00000541795 TP53TG1Q9Y2A0 90 aa12.58□□□□□ -0.4
RAB6A-208ENST00000541795 CIDEAO60543 219 aa12.57□□□□□ -0.4
RAB6A-208ENST00000541795 C3orf79P0CE67 100 aa12.57□□□□□ -0.4
RAB6A-208ENST00000541795 ORMDL2Q53FV1 153 aa12.57□□□□□ -0.4
RAB6A-208ENST00000541795 FAM222AQ5U5X8 452 aa12.57□□□□□ -0.4
RAB6A-208ENST00000541795 NEXN-AS1Q8NBZ9 246 aa12.57□□□□□ -0.4
RAB6A-208ENST00000541795 TNFRSF18Q9Y5U5 241 aa12.57□□□□□ -0.4
RAB6A-208ENST00000541795 RIPPLY3P57055 190 aa12.56□□□□□ -0.4
RAB6A-208ENST00000541795 KIR2DL4Q99706 377 aa12.56□□□□□ -0.4
RAB6A-208ENST00000541795 NOTCH1P46531 2555 aa12.56□□□□□ -0.4
RAB6A-208ENST00000541795 K7EQD1 137 aa12.55□□□□□ -0.4
RAB6A-208ENST00000541795 NUDT3O95989 172 aa12.55□□□□□ -0.4
RAB6A-208ENST00000541795 BTF3P20290 206 aaKnown RBP12.55□□□□□ -0.4
RAB6A-208ENST00000541795 C18orf15Q96N68 181 aa12.55□□□□□ -0.4
RAB6A-208ENST00000541795 RETNQ9HD89 108 aa12.55□□□□□ -0.4
RAB6A-208ENST00000541795 Q9UF83 564 aa12.55□□□□□ -0.4
RAB6A-208ENST00000541795 SCGB1D1O95968 90 aa12.55□□□□□ -0.4
RAB6A-208ENST00000541795 CTAG1AP78358 180 aa12.55□□□□□ -0.4
RAB6A-208ENST00000541795 DNAJC30Q96LL9 226 aa12.55□□□□□ -0.4
RAB6A-208ENST00000541795 DKK2Q9UBU2 259 aa12.55□□□□□ -0.4
RAB6A-208ENST00000541795 TRGV4A0A0C4DH28 118 aa12.54□□□□□ -0.4
RAB6A-208ENST00000541795 I3L3M4 83 aa12.53□□□□□ -0.4
RAB6A-208ENST00000541795 K7EIL1 84 aa12.53□□□□□ -0.4
RAB6A-208ENST00000541795 SLC25A29Q8N8R3 303 aa12.53□□□□□ -0.4
RAB6A-208ENST00000541795 DEFB104AQ8WTQ1 72 aa12.53□□□□□ -0.4
RAB6A-208ENST00000541795 MAP1LC3CQ9BXW4 147 aa12.53□□□□□ -0.4
RAB6A-208ENST00000541795 TRBV10-1A0A0K0K1A3 114 aa12.53□□□□□ -0.4
RAB6A-208ENST00000541795 CDPF1Q6NVV7 123 aa12.53□□□□□ -0.4
RAB6A-208ENST00000541795 NBEAL1Q6ZS30 2694 aa12.52□□□□□ -0.41
RAB6A-208ENST00000541795 FHL2Q14192 279 aa12.52□□□□□ -0.41
RAB6A-208ENST00000541795 MGAM2Q2M2H8 2515 aa12.51□□□□□ -0.41
RAB6A-208ENST00000541795 TRBV6-4A0A1B0GX49 114 aa12.51□□□□□ -0.41
RAB6A-208ENST00000541795 CELA1Q9UNI1 258 aa12.51□□□□□ -0.41
RAB6A-208ENST00000541795 SYS1-DBNDD2H3BUS1 97 aa12.51□□□□□ -0.41
RAB6A-208ENST00000541795 TSHBP01222 138 aa12.51□□□□□ -0.41
RAB6A-208ENST00000541795 Q8N976 141 aa12.51□□□□□ -0.41
RAB6A-208ENST00000541795 TRBV7-3A0A075B6L6 115 aa12.5□□□□□ -0.41
RAB6A-208ENST00000541795 SPART-AS1P0CW21 52 aa12.5□□□□□ -0.41
RAB6A-208ENST00000541795 DAD1P61803 113 aa12.5□□□□□ -0.41
RAB6A-208ENST00000541795 RPL36AP83881 106 aaKnown RBP12.5□□□□□ -0.41
RAB6A-208ENST00000541795 RHOHQ15669 191 aa12.5□□□□□ -0.41
RAB6A-208ENST00000541795 ZNRF2Q8NHG8 242 aa12.5□□□□□ -0.41
RAB6A-208ENST00000541795 RPL36ALQ969Q0 106 aaKnown RBP12.5□□□□□ -0.41
RAB6A-208ENST00000541795 TOMM6Q96B49 74 aa12.5□□□□□ -0.41
RAB6A-208ENST00000541795 IFI27L1Q96BM0 104 aa12.5□□□□□ -0.41
RAB6A-208ENST00000541795 H0Y8G0 127 aa12.49□□□□□ -0.41
RAB6A-208ENST00000541795 G0S2P27469 103 aa12.49□□□□□ -0.41
RAB6A-208ENST00000541795 C2orf66Q6UXQ4 117 aa12.49□□□□□ -0.41
RAB6A-208ENST00000541795 SBSPONQ8IVN8 264 aa12.49□□□□□ -0.41
RAB6A-208ENST00000541795 DEFB121Q5J5C9 76 aa12.48□□□□□ -0.41
RAB6A-208ENST00000541795 SPATA12Q7Z6I5 190 aa12.48□□□□□ -0.41
RAB6A-208ENST00000541795 PHLDA1Q8WV24 401 aaPredicted RBP12.48□□□□□ -0.41
RAB6A-208ENST00000541795 PRADC1Q9BSG0 188 aa12.48□□□□□ -0.41
RAB6A-208ENST00000541795 CYSLTR1Q9Y271 337 aa12.48□□□□□ -0.41
RAB6A-208ENST00000541795 IGHV3-38A0A0C4DH36 116 aa12.47□□□□□ -0.41
RAB6A-208ENST00000541795 TEX48A0A1B0GUV7 120 aa12.47□□□□□ -0.41
RAB6A-208ENST00000541795 GAGE12JA6NER3 117 aa12.47□□□□□ -0.41
RAB6A-208ENST00000541795 ATP5LO75964 103 aa12.47□□□□□ -0.41
RAB6A-208ENST00000541795 GAGE1Q13065 139 aa12.47□□□□□ -0.41
RAB6A-208ENST00000541795 GAGE4Q13068 117 aa12.47□□□□□ -0.41
RAB6A-208ENST00000541795 GAGE5Q13069 117 aa12.47□□□□□ -0.41
RAB6A-208ENST00000541795 GAGE13Q4V321 117 aa12.47□□□□□ -0.41
RAB6A-208ENST00000541795 PET117Q6UWS5 81 aa12.47□□□□□ -0.41
RAB6A-208ENST00000541795 HHLA3Q9XRX5 114 aa12.47□□□□□ -0.41
RAB6A-208ENST00000541795 LOC100131303A0A0U1RQF7 123 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms