RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 NTN5Q8WTR8 489 aaPredicted RBP10.33□□□□□ -0.75
SCNN1A-215ENST00000540037 ZNF22P17026 224 aaPredicted RBP10.33□□□□□ -0.76
SCNN1A-215ENST00000540037 RNASE13Q5GAN3 156 aaKnown RBP10.33□□□□□ -0.76
SCNN1A-215ENST00000540037 Q6ZSV7 163 aa10.33□□□□□ -0.76
SCNN1A-215ENST00000540037 DOPEY2Q9Y3R5 2298 aa10.33□□□□□ -0.76
SCNN1A-215ENST00000540037 TEX49A0A1B0GTD5 131 aa10.33□□□□□ -0.76
SCNN1A-215ENST00000540037 M0QY20 66 aa10.33□□□□□ -0.76
SCNN1A-215ENST00000540037 SS18L2Q9UHA2 77 aa10.33□□□□□ -0.76
SCNN1A-215ENST00000540037 CSPG4Q6UVK1 2322 aa10.33□□□□□ -0.76
SCNN1A-215ENST00000540037 TRAV4A0A0B4J268 109 aa10.32□□□□□ -0.76
SCNN1A-215ENST00000540037 RPL32P62910 135 aaKnown RBP10.32□□□□□ -0.76
SCNN1A-215ENST00000540037 CEMP1Q6PRD7 247 aaPredicted RBP10.32□□□□□ -0.76
SCNN1A-215ENST00000540037 LGALS9O00182 355 aa10.32□□□□□ -0.76
SCNN1A-215ENST00000540037 IGHV4-38-2P0DP08 117 aa10.32□□□□□ -0.76
SCNN1A-215ENST00000540037 NPC2P61916 151 aa10.32□□□□□ -0.76
SCNN1A-215ENST00000540037 Q8N1Y9 231 aa10.32□□□□□ -0.76
SCNN1A-215ENST00000540037 SPXQ9BT56 116 aa10.32□□□□□ -0.76
SCNN1A-215ENST00000540037 VCX2Q9H322 139 aa10.32□□□□□ -0.76
SCNN1A-215ENST00000540037 CREBBPQ92793 2442 aa10.32□□□□□ -0.76
SCNN1A-215ENST00000540037 RHODO00212 210 aa10.31□□□□□ -0.76
SCNN1A-215ENST00000540037 ZFAND6Q6FIF0 208 aa10.31□□□□□ -0.76
SCNN1A-215ENST00000540037 TRAV8-3A0A0A6YYJ7 113 aa10.31□□□□□ -0.76
SCNN1A-215ENST00000540037 IGHV3-73A0A0B4J1V6 119 aa10.31□□□□□ -0.76
SCNN1A-215ENST00000540037 A8MZ25 164 aa10.31□□□□□ -0.76
SCNN1A-215ENST00000540037 LEPROTO15243 131 aa10.31□□□□□ -0.76
SCNN1A-215ENST00000540037 DCANP1Q8TF63 244 aa10.31□□□□□ -0.76
SCNN1A-215ENST00000540037 PRRC2AP48634 2157 aaKnown RBP10.31□□□□□ -0.76
SCNN1A-215ENST00000540037 IGHV3-16A0A0C4DH30 117 aa10.31□□□□□ -0.76
SCNN1A-215ENST00000540037 NHLRC4P0CG21 123 aaPredicted RBP10.31□□□□□ -0.76
SCNN1A-215ENST00000540037 TEX29Q8N6K0 151 aa10.31□□□□□ -0.76
SCNN1A-215ENST00000540037 DAZ1Q9NQZ3 744 aaKnown RBP10.31□□□□□ -0.76
SCNN1A-215ENST00000540037 CITED1Q99966 193 aa10.3□□□□□ -0.76
SCNN1A-215ENST00000540037 H3BUX3 64 aa10.3□□□□□ -0.76
SCNN1A-215ENST00000540037 NCOR2Q9Y618 2525 aa10.29□□□□□ -0.76
SCNN1A-215ENST00000540037 PROK1P58294 105 aa10.29□□□□□ -0.76
SCNN1A-215ENST00000540037 SPINK13Q1W4C9 94 aa10.29□□□□□ -0.76
SCNN1A-215ENST00000540037 C10orf99Q6UWK7 81 aa10.29□□□□□ -0.76
SCNN1A-215ENST00000540037 Q9UF83 564 aa10.29□□□□□ -0.76
SCNN1A-215ENST00000540037 IGLV4-3A0A075B6K6 122 aa10.29□□□□□ -0.76
SCNN1A-215ENST00000540037 A0A0J9YXY3 114 aa10.29□□□□□ -0.76
SCNN1A-215ENST00000540037 TRIAP1O43715 76 aa10.29□□□□□ -0.76
SCNN1A-215ENST00000540037 IGHV1-69P01742 117 aa10.29□□□□□ -0.76
SCNN1A-215ENST00000540037 PRM2P04554 102 aa10.29□□□□□ -0.76
SCNN1A-215ENST00000540037 PRSS2P07478 247 aa10.29□□□□□ -0.76
SCNN1A-215ENST00000540037 CHD8Q9HCK8 2581 aa10.28□□□□□ -0.76
SCNN1A-215ENST00000540037 TRBV6-5A0A0K0K1A5 114 aa10.28□□□□□ -0.76
SCNN1A-215ENST00000540037 B5MCH6 92 aa10.28□□□□□ -0.76
SCNN1A-215ENST00000540037 HTN1P15515 57 aa10.28□□□□□ -0.76
SCNN1A-215ENST00000540037 ADAMTSL4-AS1Q5T5F5 129 aa10.28□□□□□ -0.76
SCNN1A-215ENST00000540037 C20orf203Q8NBC4 194 aa10.28□□□□□ -0.76
SCNN1A-215ENST00000540037 LINC01620Q4KN68 170 aa10.28□□□□□ -0.76
SCNN1A-215ENST00000540037 C9orf85Q96MD7 179 aa10.28□□□□□ -0.76
SCNN1A-215ENST00000540037 FAM104AQ969W3 186 aa10.28□□□□□ -0.76
SCNN1A-215ENST00000540037 A0A0B4J2C4 111 aa10.27□□□□□ -0.77
SCNN1A-215ENST00000540037 IGHV3-30-3P0DP02 117 aa10.27□□□□□ -0.77
SCNN1A-215ENST00000540037 NSUN5P1Q3KNT7 163 aa10.27□□□□□ -0.77
SCNN1A-215ENST00000540037 TRBV7-9A0A0J9YWB2 115 aa10.27□□□□□ -0.77
SCNN1A-215ENST00000540037 TMEM262E9PQX1 116 aa10.27□□□□□ -0.77
SCNN1A-215ENST00000540037 M0R2P5 195 aa10.27□□□□□ -0.77
SCNN1A-215ENST00000540037 IGHG2P01859 326 aa10.27□□□□□ -0.77
SCNN1A-215ENST00000540037 USMG5Q96IX5 58 aa10.27□□□□□ -0.77
SCNN1A-215ENST00000540037 LITAFQ99732 161 aa10.26□□□□□ -0.77
SCNN1A-215ENST00000540037 ODF3Q96PU9 254 aa10.25□□□□□ -0.77
SCNN1A-215ENST00000540037 IGHV4-61A0A0C4DH41 118 aa10.25□□□□□ -0.77
SCNN1A-215ENST00000540037 SNCGO76070 127 aa10.25□□□□□ -0.77
SCNN1A-215ENST00000540037 ID1P41134 155 aa10.25□□□□□ -0.77
SCNN1A-215ENST00000540037 ATXN8Q156A1 80 aa10.25□□□□□ -0.77
SCNN1A-215ENST00000540037 CLEC2BQ92478 149 aa10.25□□□□□ -0.77
SCNN1A-215ENST00000540037 C19orf84I3L1E1 186 aa10.24□□□□□ -0.77
SCNN1A-215ENST00000540037 I3L3M4 83 aa10.24□□□□□ -0.77
SCNN1A-215ENST00000540037 GAGE2BQ13066 116 aa10.24□□□□□ -0.77
SCNN1A-215ENST00000540037 GAGE2EQ4V326 116 aa10.24□□□□□ -0.77
SCNN1A-215ENST00000540037 DAND5Q8N907 189 aa10.24□□□□□ -0.77
SCNN1A-215ENST00000540037 DUX5Q96PT3 197 aa10.24□□□□□ -0.77
SCNN1A-215ENST00000540037 GAGE2DQ9UEU5 116 aa10.24□□□□□ -0.77
SCNN1A-215ENST00000540037 ZANQ9Y493 2812 aa10.24□□□□□ -0.77
SCNN1A-215ENST00000540037 KNCNA6PVL3 124 aa10.24□□□□□ -0.77
SCNN1A-215ENST00000540037 RHOHQ15669 191 aa10.24□□□□□ -0.77
SCNN1A-215ENST00000540037 CCDC179H3BU77 68 aa10.23□□□□□ -0.77
SCNN1A-215ENST00000540037 CD28P10747 220 aa10.23□□□□□ -0.77
SCNN1A-215ENST00000540037 NDUFV3P56181 108 aaKnown RBP10.23□□□□□ -0.77
SCNN1A-215ENST00000540037 TIMM21Q9BVV7 248 aa10.23□□□□□ -0.77
SCNN1A-215ENST00000540037 IGHV1OR15-1A0A075B7D0 117 aa10.23□□□□□ -0.77
SCNN1A-215ENST00000540037 A0A0J9YX75 114 aa10.23□□□□□ -0.77
SCNN1A-215ENST00000540037 IGLV1-40P01703 118 aa10.23□□□□□ -0.77
SCNN1A-215ENST00000540037 KLRB1Q12918 225 aa10.23□□□□□ -0.77
SCNN1A-215ENST00000540037 GAGE5Q13069 117 aa10.23□□□□□ -0.77
SCNN1A-215ENST00000540037 GAGE6Q13070 117 aa10.23□□□□□ -0.77
SCNN1A-215ENST00000540037 SPTBN4Q9H254 2564 aa10.22□□□□□ -0.77
SCNN1A-215ENST00000540037 UTP20O75691 2785 aaKnown RBP10.22□□□□□ -0.77
SCNN1A-215ENST00000540037 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.22□□□□□ -0.77
SCNN1A-215ENST00000540037 RBMY1A1P0DJD3 496 aaKnown RBP10.22□□□□□ -0.77
SCNN1A-215ENST00000540037 RBMY1CP0DJD4 496 aa10.22□□□□□ -0.77
SCNN1A-215ENST00000540037 RBMY1FQ15415 496 aaKnown RBP10.22□□□□□ -0.77
SCNN1A-215ENST00000540037 TTC32Q5I0X7 151 aa10.22□□□□□ -0.77
SCNN1A-215ENST00000540037 NACAE9PAV3 2078 aa10.22□□□□□ -0.77
SCNN1A-215ENST00000540037 A6NDX4 124 aa10.22□□□□□ -0.77
SCNN1A-215ENST00000540037 H7C423 109 aa10.22□□□□□ -0.77
SCNN1A-215ENST00000540037 ITPR1Q14643 2758 aa10.21□□□□□ -0.77
SCNN1A-215ENST00000540037 TRAV8-4A0A0B4J246 113 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms