RNA–Protein interactions for RNA: ENST00000538261.7

CLDN7-203, Transcript of claudin 7, humanhuman

TSL 5 BASIC

Gene CLDN7, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN7-203ENST00000538261 LINC00482Q8N8I6 264 aa12.89□□□□□ -0.35
CLDN7-203ENST00000538261 ODF3Q96PU9 254 aa12.89□□□□□ -0.35
CLDN7-203ENST00000538261 SPANXB1Q9NS25 103 aaPredicted RBP12.89□□□□□ -0.35
CLDN7-203ENST00000538261 A0A1B0GWB2 263 aa12.88□□□□□ -0.35
CLDN7-203ENST00000538261 H7C1H1 209 aa12.88□□□□□ -0.35
CLDN7-203ENST00000538261 MAPKAPK5-AS1Q8N8E1 139 aa12.88□□□□□ -0.35
CLDN7-203ENST00000538261 MAP6D1Q9H9H5 199 aa12.88□□□□□ -0.35
CLDN7-203ENST00000538261 KLLNB2CW77 178 aa12.88□□□□□ -0.35
CLDN7-203ENST00000538261 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.88□□□□□ -0.35
CLDN7-203ENST00000538261 DEFB131AP59861 70 aa12.88□□□□□ -0.35
CLDN7-203ENST00000538261 AGRNO00468 2067 aa12.87□□□□□ -0.35
CLDN7-203ENST00000538261 J3KRW8 73 aa12.87□□□□□ -0.35
CLDN7-203ENST00000538261 K7EMI3 77 aa12.87□□□□□ -0.35
CLDN7-203ENST00000538261 IGLV1-51P01701 117 aa12.87□□□□□ -0.35
CLDN7-203ENST00000538261 PF4P02776 101 aa12.87□□□□□ -0.35
CLDN7-203ENST00000538261 TRBV7-3A0A075B6L6 115 aa12.86□□□□□ -0.35
CLDN7-203ENST00000538261 F8VRH5 84 aa12.86□□□□□ -0.35
CLDN7-203ENST00000538261 RRN3P1Q2M238 152 aa12.86□□□□□ -0.35
CLDN7-203ENST00000538261 ORMDL2Q53FV1 153 aa12.86□□□□□ -0.35
CLDN7-203ENST00000538261 HIST1H4GQ99525 98 aa12.86□□□□□ -0.35
CLDN7-203ENST00000538261 TENM1Q9UKZ4 2725 aa12.86□□□□□ -0.35
CLDN7-203ENST00000538261 AMTNQ6UX39 209 aa12.86□□□□□ -0.35
CLDN7-203ENST00000538261 SPATA25Q9BR10 227 aa12.86□□□□□ -0.35
CLDN7-203ENST00000538261 GAGE12HA6NDE8 117 aa12.85□□□□□ -0.35
CLDN7-203ENST00000538261 A8MTW9 85 aa12.85□□□□□ -0.35
CLDN7-203ENST00000538261 DUSP14O95147 198 aaKnown RBP12.85□□□□□ -0.35
CLDN7-203ENST00000538261 AZU1P20160 251 aa12.85□□□□□ -0.35
CLDN7-203ENST00000538261 KRTAP24-1Q3LI83 254 aa12.85□□□□□ -0.35
CLDN7-203ENST00000538261 ODF3L2Q3SX64 289 aa12.85□□□□□ -0.35
CLDN7-203ENST00000538261 TRAV21A0A0B4J279 112 aa12.84□□□□□ -0.35
CLDN7-203ENST00000538261 KNCNA6PVL3 124 aa12.84□□□□□ -0.35
CLDN7-203ENST00000538261 RNASE4P34096 147 aaKnown RBP12.84□□□□□ -0.35
CLDN7-203ENST00000538261 WFDC2Q14508 124 aa12.84□□□□□ -0.35
CLDN7-203ENST00000538261 SPANXN1Q5VSR9 72 aa12.84□□□□□ -0.35
CLDN7-203ENST00000538261 SMIM2Q9BVW6 85 aa12.84□□□□□ -0.35
CLDN7-203ENST00000538261 MYMXA0A1B0GTQ4 84 aa12.84□□□□□ -0.35
CLDN7-203ENST00000538261 IGKV3-20P01619 116 aa12.84□□□□□ -0.35
CLDN7-203ENST00000538261 GAGE13Q4V321 117 aa12.84□□□□□ -0.35
CLDN7-203ENST00000538261 OR11H12B2RN74 326 aa12.83□□□□□ -0.36
CLDN7-203ENST00000538261 OR11H2Q8NH07 326 aa12.83□□□□□ -0.36
CLDN7-203ENST00000538261 TOMM6Q96B49 74 aa12.83□□□□□ -0.36
CLDN7-203ENST00000538261 C20orf78Q9BR46 151 aa12.83□□□□□ -0.36
CLDN7-203ENST00000538261 ATRQ13535 2644 aa12.83□□□□□ -0.36
CLDN7-203ENST00000538261 H3BMM0 161 aa12.82□□□□□ -0.36
CLDN7-203ENST00000538261 SPATA3Q8NHX4 192 aa12.82□□□□□ -0.36
CLDN7-203ENST00000538261 RBMY1BA6NDE4 496 aaKnown RBP12.82□□□□□ -0.36
CLDN7-203ENST00000538261 RBMY1EA6NEQ0 496 aaKnown RBP12.82□□□□□ -0.36
CLDN7-203ENST00000538261 RBMY1DP0C7P1 496 aaKnown RBP12.82□□□□□ -0.36
CLDN7-203ENST00000538261 PRO0461Q9UI25 63 aa12.82□□□□□ -0.36
CLDN7-203ENST00000538261 H3BMG7 143 aa12.81□□□□□ -0.36
CLDN7-203ENST00000538261 SPINK13Q1W4C9 94 aa12.81□□□□□ -0.36
CLDN7-203ENST00000538261 PRIMA1Q86XR5 153 aa12.81□□□□□ -0.36
CLDN7-203ENST00000538261 GTSF1LQ9H1H1 148 aa12.81□□□□□ -0.36
CLDN7-203ENST00000538261 TRAV26-2A0A0B4J265 109 aa12.8□□□□□ -0.36
CLDN7-203ENST00000538261 NEXN-AS1Q8NBZ9 246 aa12.8□□□□□ -0.36
CLDN7-203ENST00000538261 SCGB3A1Q96QR1 104 aa12.8□□□□□ -0.36
CLDN7-203ENST00000538261 MAST4O15021 2626 aa12.79□□□□□ -0.36
CLDN7-203ENST00000538261 TRAV12-2A0A075B6T6 113 aa12.79□□□□□ -0.36
CLDN7-203ENST00000538261 TMEM238LA0A1B0GVL6 79 aa12.79□□□□□ -0.36
CLDN7-203ENST00000538261 A6NJY4 79 aa12.79□□□□□ -0.36
CLDN7-203ENST00000538261 M0R381 172 aa12.79□□□□□ -0.36
CLDN7-203ENST00000538261 BEAN1Q3B7T3 259 aa12.79□□□□□ -0.36
CLDN7-203ENST00000538261 ANXA2RQ3ZCQ2 193 aa12.79□□□□□ -0.36
CLDN7-203ENST00000538261 ATP6V0E2Q8NHE4 81 aa12.79□□□□□ -0.36
CLDN7-203ENST00000538261 TRAV12-3A0A0B4J271 114 aa12.78□□□□□ -0.36
CLDN7-203ENST00000538261 PPP1R17O96001 155 aa12.78□□□□□ -0.36
CLDN7-203ENST00000538261 MED14OSP0DP75 135 aa12.78□□□□□ -0.36
CLDN7-203ENST00000538261 SUMO2P61956 95 aaKnown RBP12.78□□□□□ -0.36
CLDN7-203ENST00000538261 A0A1B0GV72 72 aa12.78□□□□□ -0.36
CLDN7-203ENST00000538261 ETDBQ3ZM63 59 aa12.78□□□□□ -0.36
CLDN7-203ENST00000538261 H3BVH4 76 aa12.77□□□□□ -0.37
CLDN7-203ENST00000538261 SMAGPQ0VAQ4 97 aa12.77□□□□□ -0.37
CLDN7-203ENST00000538261 CLUHP3Q96NS8 147 aa12.77□□□□□ -0.37
CLDN7-203ENST00000538261 DPH3P1Q9H4G8 78 aa12.77□□□□□ -0.37
CLDN7-203ENST00000538261 LINC01549A6NIU2 74 aa12.76□□□□□ -0.37
CLDN7-203ENST00000538261 SH2D6Q7Z4S9 175 aa12.76□□□□□ -0.37
CLDN7-203ENST00000538261 FAM110AQ9BQ89 295 aa12.76□□□□□ -0.37
CLDN7-203ENST00000538261 C19orf73Q9NVV2 129 aa12.76□□□□□ -0.37
CLDN7-203ENST00000538261 VWFP04275 2813 aa12.76□□□□□ -0.37
CLDN7-203ENST00000538261 CD7P09564 240 aa12.76□□□□□ -0.37
CLDN7-203ENST00000538261 MORN3Q6PF18 240 aaPredicted RBP12.76□□□□□ -0.37
CLDN7-203ENST00000538261 RASL10AQ92737 203 aa12.76□□□□□ -0.37
CLDN7-203ENST00000538261 RBMY1A1P0DJD3 496 aaKnown RBP12.75□□□□□ -0.37
CLDN7-203ENST00000538261 RBMY1CP0DJD4 496 aa12.75□□□□□ -0.37
CLDN7-203ENST00000538261 RBMY1FQ15415 496 aaKnown RBP12.75□□□□□ -0.37
CLDN7-203ENST00000538261 INSL3P51460 131 aa12.74□□□□□ -0.37
CLDN7-203ENST00000538261 TRPT1Q86TN4 253 aaKnown RBP12.74□□□□□ -0.37
CLDN7-203ENST00000538261 BAALCQ8WXS3 180 aa12.74□□□□□ -0.37
CLDN7-203ENST00000538261 GNRH2O43555 120 aa12.74□□□□□ -0.37
CLDN7-203ENST00000538261 ASIPP42127 132 aa12.74□□□□□ -0.37
CLDN7-203ENST00000538261 CMC4P56277 68 aaPredicted RBP12.74□□□□□ -0.37
CLDN7-203ENST00000538261 PAPPA-AS1Q5QFB9 102 aa12.74□□□□□ -0.37
CLDN7-203ENST00000538261 LYRM7Q5U5X0 104 aa12.74□□□□□ -0.37
CLDN7-203ENST00000538261 FAM159AQ6UWV7 190 aa12.74□□□□□ -0.37
CLDN7-203ENST00000538261 PRADC1Q9BSG0 188 aa12.74□□□□□ -0.37
CLDN7-203ENST00000538261 CYSLTR1Q9Y271 337 aa12.74□□□□□ -0.37
CLDN7-203ENST00000538261 FBN1P35555 2871 aaKnown RBP12.74□□□□□ -0.37
CLDN7-203ENST00000538261 RNASE3P12724 160 aaKnown RBP12.73□□□□□ -0.37
CLDN7-203ENST00000538261 UBE2D1P51668 147 aa12.73□□□□□ -0.37
CLDN7-203ENST00000538261 C9orf66Q5T8R8 295 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms