RNA–Protein interactions for RNA: ENST00000538129.1

DDB1-210, Transcript of damage specific DNA binding protein 1, human

TSL 2

Gene DDB1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDB1-210	ENST00000538129	IFITM2	Q01629	132 aa		4.12	□□□□□ -1.75
DDB1-210	ENST00000538129	TMEM241	Q24JQ0	296 aa		4.12	□□□□□ -1.75
DDB1-210	ENST00000538129	CFAP126	Q5VTH2	177 aa		4.12	□□□□□ -1.75
DDB1-210	ENST00000538129	FAM231D	Q6ZW35	169 aa		4.12	□□□□□ -1.75
DDB1-210	ENST00000538129	ZFP82	Q8N141	532 aa		4.12	□□□□□ -1.75
DDB1-210	ENST00000538129	NEXN-AS1	Q8NBZ9	246 aa		4.12	□□□□□ -1.75
DDB1-210	ENST00000538129	OR2D3	Q8NGH3	330 aa		4.12	□□□□□ -1.75
DDB1-210	ENST00000538129	SMIM7	Q9BQ49	75 aa		4.12	□□□□□ -1.75
DDB1-210	ENST00000538129		Q9H8V8	135 aa		4.12	□□□□□ -1.75
DDB1-210	ENST00000538129	TRBV6-4	A0A1B0GX49	114 aa		4.11	□□□□□ -1.75
DDB1-210	ENST00000538129		M0R381	172 aa		4.11	□□□□□ -1.75
DDB1-210	ENST00000538129	SNAI2	O43623	268 aa		4.11	□□□□□ -1.75
DDB1-210	ENST00000538129	NXPH4	O95158	308 aa		4.11	□□□□□ -1.75
DDB1-210	ENST00000538129	SFTA3	P0C7M3	94 aa		4.11	□□□□□ -1.75
DDB1-210	ENST00000538129	IGLC6	P0CF74	106 aa		4.11	□□□□□ -1.75
DDB1-210	ENST00000538129	GATA1	P15976	413 aa	Predicted RBP	4.11	□□□□□ -1.75
DDB1-210	ENST00000538129	CCL18	P55774	89 aa		4.11	□□□□□ -1.75
DDB1-210	ENST00000538129	ERVFC1-1	P60608	527 aa		4.11	□□□□□ -1.75
DDB1-210	ENST00000538129	CACNG7	P62955	275 aa		4.11	□□□□□ -1.75
DDB1-210	ENST00000538129	MRPL23	Q16540	153 aa	Known RBP	4.11	□□□□□ -1.75
DDB1-210	ENST00000538129	SOHLH1	Q5JUK2	328 aa		4.11	□□□□□ -1.75
DDB1-210	ENST00000538129	SH2D6	Q7Z4S9	175 aa		4.11	□□□□□ -1.75
DDB1-210	ENST00000538129	LINC01551	Q86U37	167 aa		4.11	□□□□□ -1.75
DDB1-210	ENST00000538129	FER1L6-AS1	Q8NA97	138 aa		4.11	□□□□□ -1.75
DDB1-210	ENST00000538129	SFRP2	Q96HF1	295 aa		4.11	□□□□□ -1.75
DDB1-210	ENST00000538129	KRTAP17-1	Q9BYP8	105 aa		4.11	□□□□□ -1.75
DDB1-210	ENST00000538129	RPP21	Q9H633	154 aa	Known RBP	4.11	□□□□□ -1.75
DDB1-210	ENST00000538129		A0A096LPF7	62 aa		4.1	□□□□□ -1.75
DDB1-210	ENST00000538129	hDV102S1	A0JD36	115 aa		4.1	□□□□□ -1.75
DDB1-210	ENST00000538129		A8MWL6	223 aa		4.1	□□□□□ -1.75
DDB1-210	ENST00000538129	GATC	O43716	136 aa	Known RBP	4.1	□□□□□ -1.75
DDB1-210	ENST00000538129	CRYGD	P07320	174 aa		4.1	□□□□□ -1.75
DDB1-210	ENST00000538129	FOXA3	P55318	350 aa	Predicted RBP	4.1	□□□□□ -1.75
DDB1-210	ENST00000538129	ESRG	Q1W209	222 aa		4.1	□□□□□ -1.75
DDB1-210	ENST00000538129	SPANXN1	Q5VSR9	72 aa		4.1	□□□□□ -1.75
DDB1-210	ENST00000538129	UFSP1	Q6NVU6	142 aa		4.1	□□□□□ -1.75
DDB1-210	ENST00000538129	SLC25A29	Q8N8R3	303 aa		4.1	□□□□□ -1.75
DDB1-210	ENST00000538129	OR10AG1	Q8NH19	301 aa		4.1	□□□□□ -1.75
DDB1-210	ENST00000538129	PRADC1	Q9BSG0	188 aa		4.1	□□□□□ -1.75
DDB1-210	ENST00000538129	SAMD10	Q9BYL1	202 aa		4.1	□□□□□ -1.75
DDB1-210	ENST00000538129	RNASE7	Q9H1E1	156 aa	Known RBP	4.1	□□□□□ -1.75
DDB1-210	ENST00000538129	OSTC	Q9NRP0	149 aa		4.1	□□□□□ -1.75
DDB1-210	ENST00000538129	NAT8	Q9UHE5	227 aa		4.1	□□□□□ -1.75
DDB1-210	ENST00000538129	ICOS	Q9Y6W8	199 aa		4.1	□□□□□ -1.75
DDB1-210	ENST00000538129	KMT2A	Q03164	3969 aa		4.1	□□□□□ -1.75
DDB1-210	ENST00000538129	IGHV3-73	A0A0B4J1V6	119 aa		4.09	□□□□□ -1.75
DDB1-210	ENST00000538129	FAM231B	A6NCW3	169 aa		4.09	□□□□□ -1.75
DDB1-210	ENST00000538129		K7EQD1	137 aa		4.09	□□□□□ -1.75
DDB1-210	ENST00000538129	PRSS2	P07478	247 aa		4.09	□□□□□ -1.75
DDB1-210	ENST00000538129	GZMB	P10144	247 aa		4.09	□□□□□ -1.75
DDB1-210	ENST00000538129	SRI	P30626	198 aa		4.09	□□□□□ -1.75
DDB1-210	ENST00000538129	RAB4B	P61018	213 aa		4.09	□□□□□ -1.75
DDB1-210	ENST00000538129	RPL23	P62829	140 aa	Known RBP	4.09	□□□□□ -1.75
DDB1-210	ENST00000538129	GAGE1	Q13065	139 aa		4.09	□□□□□ -1.75
DDB1-210	ENST00000538129	GAGE4	Q13068	117 aa		4.09	□□□□□ -1.75
DDB1-210	ENST00000538129	RHOH	Q15669	191 aa		4.09	□□□□□ -1.75
DDB1-210	ENST00000538129	UQCC3	Q6UW78	93 aa		4.09	□□□□□ -1.75
DDB1-210	ENST00000538129	LYPD5	Q6UWN5	251 aa		4.09	□□□□□ -1.75
DDB1-210	ENST00000538129	LYZL1	Q6UWQ5	148 aa		4.09	□□□□□ -1.75
DDB1-210	ENST00000538129	NEGR1	Q7Z3B1	354 aa		4.09	□□□□□ -1.75
DDB1-210	ENST00000538129	UBE2DNL	Q8IWF7	75 aa		4.09	□□□□□ -1.75
DDB1-210	ENST00000538129	C15orf54	Q8N8G6	183 aa		4.09	□□□□□ -1.75
DDB1-210	ENST00000538129	ISOC2	Q96AB3	205 aa		4.09	□□□□□ -1.75
DDB1-210	ENST00000538129	TPPP3	Q9BW30	176 aa		4.09	□□□□□ -1.75
DDB1-210	ENST00000538129	CNFN	Q9BYD5	112 aa		4.09	□□□□□ -1.75
DDB1-210	ENST00000538129	GFRA4	Q9GZZ7	299 aa		4.09	□□□□□ -1.75
DDB1-210	ENST00000538129	JPT2	Q9H910	190 aa		4.09	□□□□□ -1.75
DDB1-210	ENST00000538129	LINC00588	Q9Y4M8	146 aa		4.09	□□□□□ -1.75
DDB1-210	ENST00000538129	DNAH6	Q9C0G6	4158 aa		4.09	□□□□□ -1.76
DDB1-210	ENST00000538129	MUC21	A0A0G2JKD1	596 aa		4.08	□□□□□ -1.76
DDB1-210	ENST00000538129	TRBV10-1	A0A0K0K1A3	114 aa		4.08	□□□□□ -1.76
DDB1-210	ENST00000538129	MUC21	A0A140T8X8	626 aa		4.08	□□□□□ -1.76
DDB1-210	ENST00000538129		F8WDY8	70 aa		4.08	□□□□□ -1.76
DDB1-210	ENST00000538129	SMIM17	P0DL12	118 aa		4.08	□□□□□ -1.76
DDB1-210	ENST00000538129	NTF3	P20783	257 aa		4.08	□□□□□ -1.76
DDB1-210	ENST00000538129	CTRL	P40313	264 aa		4.08	□□□□□ -1.76
DDB1-210	ENST00000538129	KRTAP5-3	Q6L8H2	238 aa		4.08	□□□□□ -1.76
DDB1-210	ENST00000538129	C14orf178	Q8N769	122 aa	Predicted RBP	4.08	□□□□□ -1.76
DDB1-210	ENST00000538129	OR10G8	Q8NGN5	311 aa		4.08	□□□□□ -1.76
DDB1-210	ENST00000538129	ZNRF2	Q8NHG8	242 aa		4.08	□□□□□ -1.76
DDB1-210	ENST00000538129	TSKU	Q8WUA8	353 aa		4.08	□□□□□ -1.76
DDB1-210	ENST00000538129	GTSF1	Q8WW33	167 aa		4.08	□□□□□ -1.76
DDB1-210	ENST00000538129	AP1S3	Q96PC3	154 aa		4.08	□□□□□ -1.76
DDB1-210	ENST00000538129	UPK3B	Q9BT76	320 aa		4.08	□□□□□ -1.76
DDB1-210	ENST00000538129	MRPS16	Q9Y3D3	137 aa	Known RBP	4.08	□□□□□ -1.76
DDB1-210	ENST00000538129	KIF25-AS1	Q9Y6Z4	181 aa		4.08	□□□□□ -1.76
DDB1-210	ENST00000538129	DNAH10	Q8IVF4	4471 aa		4.08	□□□□□ -1.76
DDB1-210	ENST00000538129	DNAH2	Q9P225	4427 aa		4.07	□□□□□ -1.76
DDB1-210	ENST00000538129	TRGC1	P0CF51	173 aa		4.07	□□□□□ -1.76
DDB1-210	ENST00000538129	AMT	P48728	403 aa		4.07	□□□□□ -1.76
DDB1-210	ENST00000538129	LINC00315	P59091	139 aa		4.07	□□□□□ -1.76
DDB1-210	ENST00000538129	SST	P61278	116 aa		4.07	□□□□□ -1.76
DDB1-210	ENST00000538129	ADIRF	Q15847	76 aa		4.07	□□□□□ -1.76
DDB1-210	ENST00000538129	FAM74A4	Q5TZK3	123 aa		4.07	□□□□□ -1.76
DDB1-210	ENST00000538129		V9GYV3	84 aa		4.07	□□□□□ -1.76
DDB1-210	ENST00000538129	TRBV7-3	A0A075B6L6	115 aa		4.06	□□□□□ -1.76
DDB1-210	ENST00000538129	LOC100131303	A0A0U1RQF7	123 aa		4.06	□□□□□ -1.76
DDB1-210	ENST00000538129	SMIM27	A0A1W2PRY6	76 aa		4.06	□□□□□ -1.76
DDB1-210	ENST00000538129	TMEM218	A2RU14	115 aa		4.06	□□□□□ -1.76
DDB1-210	ENST00000538129	LINC00862	A6NCI5	91 aa		4.06	□□□□□ -1.76

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