RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 FGF23Q9GZV9 251 aaPredicted RBP8.26□□□□□ -1.09
CLIP1-209ENST00000537178 DIRC1Q969H9 104 aa8.25□□□□□ -1.09
CLIP1-209ENST00000537178 IGHV7-81A0A0B4J1V7 117 aa8.25□□□□□ -1.09
CLIP1-209ENST00000537178 SLURP1P55000 103 aa8.25□□□□□ -1.09
CLIP1-209ENST00000537178 NPBQ8NG41 125 aa8.25□□□□□ -1.09
CLIP1-209ENST00000537178 TRBV7-3A0A075B6L6 115 aa8.25□□□□□ -1.09
CLIP1-209ENST00000537178 K7EIM0 57 aa8.25□□□□□ -1.09
CLIP1-209ENST00000537178 PRSS33Q8NF86 280 aa8.25□□□□□ -1.09
CLIP1-209ENST00000537178 IGLV11-55A0A075B6I3 123 aa8.25□□□□□ -1.09
CLIP1-209ENST00000537178 I3L2K1 104 aa8.25□□□□□ -1.09
CLIP1-209ENST00000537178 C16orf54Q6UWD8 224 aa8.25□□□□□ -1.09
CLIP1-209ENST00000537178 SVIPQ8NHG7 77 aa8.24□□□□□ -1.09
CLIP1-209ENST00000537178 SPAG11BQ08648 103 aa8.24□□□□□ -1.09
CLIP1-209ENST00000537178 MSRB1Q9NZV6 116 aa8.24□□□□□ -1.09
CLIP1-209ENST00000537178 CTSGP08311 255 aa8.24□□□□□ -1.09
CLIP1-209ENST00000537178 CSPG4Q6UVK1 2322 aa8.24□□□□□ -1.09
CLIP1-209ENST00000537178 TRBV10-2A0A0K0K1G8 114 aa8.23□□□□□ -1.09
CLIP1-209ENST00000537178 SPATA25Q9BR10 227 aa8.23□□□□□ -1.09
CLIP1-209ENST00000537178 HIVEP2P31629 2446 aa8.23□□□□□ -1.09
CLIP1-209ENST00000537178 TMEM61Q8N0U2 210 aa8.23□□□□□ -1.09
CLIP1-209ENST00000537178 E9PLD3 99 aa8.23□□□□□ -1.09
CLIP1-209ENST00000537178 MED14OSP0DP75 135 aa8.23□□□□□ -1.09
CLIP1-209ENST00000537178 SEM1Q6ZVN7 128 aa8.23□□□□□ -1.09
CLIP1-209ENST00000537178 LY6G6EA0A0G2JKS1 128 aa8.23□□□□□ -1.09
CLIP1-209ENST00000537178 TMEM256-PLSCR3K7ERE1 68 aa8.23□□□□□ -1.09
CLIP1-209ENST00000537178 LGALS9O00182 355 aa8.23□□□□□ -1.09
CLIP1-209ENST00000537178 FXYD2P54710 66 aa8.23□□□□□ -1.09
CLIP1-209ENST00000537178 Q8N1Y9 231 aa8.23□□□□□ -1.09
CLIP1-209ENST00000537178 HHLA3Q9XRX5 114 aa8.23□□□□□ -1.09
CLIP1-209ENST00000537178 U3KQA8 63 aa8.23□□□□□ -1.09
CLIP1-209ENST00000537178 NUPR1O60356 82 aa8.22□□□□□ -1.09
CLIP1-209ENST00000537178 FANCD2OSQ96PS1 177 aa8.22□□□□□ -1.09
CLIP1-209ENST00000537178 C11orf1Q9H5F2 150 aa8.22□□□□□ -1.09
CLIP1-209ENST00000537178 KIAA1549Q9HCM3 1950 aa8.22□□□□□ -1.09
CLIP1-209ENST00000537178 NCOA6Q14686 2063 aaPredicted RBP8.22□□□□□ -1.09
CLIP1-209ENST00000537178 K7EMT4 169 aa8.22□□□□□ -1.09
CLIP1-209ENST00000537178 WFDC2Q14508 124 aa8.22□□□□□ -1.09
CLIP1-209ENST00000537178 C11orf53Q8IXP5 236 aa8.22□□□□□ -1.09
CLIP1-209ENST00000537178 IGHV4-61A0A0C4DH41 118 aa8.22□□□□□ -1.09
CLIP1-209ENST00000537178 COL6A3P12111 3177 aa8.22□□□□□ -1.09
CLIP1-209ENST00000537178 TRBV12-3P01733 135 aa8.22□□□□□ -1.09
CLIP1-209ENST00000537178 CRYGBP07316 175 aa8.22□□□□□ -1.09
CLIP1-209ENST00000537178 BLCAPP62952 87 aa8.21□□□□□ -1.09
CLIP1-209ENST00000537178 DEFB113Q30KQ7 82 aa8.21□□□□□ -1.09
CLIP1-209ENST00000537178 LINC00173Q6ZV60 143 aa8.21□□□□□ -1.09
CLIP1-209ENST00000537178 F8W735 103 aaPredicted RBP8.21□□□□□ -1.09
CLIP1-209ENST00000537178 NCR3O14931 201 aa8.21□□□□□ -1.09
CLIP1-209ENST00000537178 RPL39P62891 51 aaKnown RBP8.21□□□□□ -1.09
CLIP1-209ENST00000537178 FOXI1Q12951 378 aa8.21□□□□□ -1.09
CLIP1-209ENST00000537178 DAND5Q8N907 189 aa8.21□□□□□ -1.09
CLIP1-209ENST00000537178 C11orf86A6NJI1 115 aa8.21□□□□□ -1.1
CLIP1-209ENST00000537178 PATE2Q6UY27 113 aa8.2□□□□□ -1.1
CLIP1-209ENST00000537178 Q6ZSR3 168 aa8.2□□□□□ -1.1
CLIP1-209ENST00000537178 TOMM6Q96B49 74 aa8.2□□□□□ -1.1
CLIP1-209ENST00000537178 ESM1Q9NQ30 184 aa8.2□□□□□ -1.1
CLIP1-209ENST00000537178 H0Y9J4 135 aa8.2□□□□□ -1.1
CLIP1-209ENST00000537178 PLA2G2CQ5R387 149 aa8.2□□□□□ -1.1
CLIP1-209ENST00000537178 MIR7-3HGQ8N6C7 128 aa8.2□□□□□ -1.1
CLIP1-209ENST00000537178 VPS13AQ96RL7 3174 aa8.2□□□□□ -1.1
CLIP1-209ENST00000537178 RNF138Q8WVD3 245 aa8.2□□□□□ -1.1
CLIP1-209ENST00000537178 KLK12Q9UKR0 248 aa8.2□□□□□ -1.1
CLIP1-209ENST00000537178 C2orf70A6NJV1 201 aa8.19□□□□□ -1.1
CLIP1-209ENST00000537178 IGHV4-38-2P0DP08 117 aa8.19□□□□□ -1.1
CLIP1-209ENST00000537178 DAZAP2Q15038 168 aaPredicted RBP8.19□□□□□ -1.1
CLIP1-209ENST00000537178 RBX1P62877 108 aa8.19□□□□□ -1.1
CLIP1-209ENST00000537178 MYCNOSP40205 109 aa8.19□□□□□ -1.1
CLIP1-209ENST00000537178 LINC00643Q86TS7 51 aa8.19□□□□□ -1.1
CLIP1-209ENST00000537178 KLK5Q9Y337 293 aaPredicted RBP8.19□□□□□ -1.1
CLIP1-209ENST00000537178 IGHV1-58A0A0C4DH39 117 aa8.19□□□□□ -1.1
CLIP1-209ENST00000537178 TMEM89A2RUT3 159 aa8.19□□□□□ -1.1
CLIP1-209ENST00000537178 Q8N9W7 124 aa8.19□□□□□ -1.1
CLIP1-209ENST00000537178 COX7BP24311 80 aa8.18□□□□□ -1.1
CLIP1-209ENST00000537178 CTRLP40313 264 aa8.18□□□□□ -1.1
CLIP1-209ENST00000537178 GPHB5Q86YW7 130 aa8.18□□□□□ -1.1
CLIP1-209ENST00000537178 TTTY13Q9BZ97 58 aa8.18□□□□□ -1.1
CLIP1-209ENST00000537178 IGHV4-30-2A0A087WSY4 118 aa8.18□□□□□ -1.1
CLIP1-209ENST00000537178 TRBV10-1A0A0K0K1A3 114 aa8.18□□□□□ -1.1
CLIP1-209ENST00000537178 CELSR3Q9NYQ7 3312 aa8.18□□□□□ -1.1
CLIP1-209ENST00000537178 IGHV4OR15-8A0A075B7B6 117 aa8.18□□□□□ -1.1
CLIP1-209ENST00000537178 A0A087WW49 117 aa8.18□□□□□ -1.1
CLIP1-209ENST00000537178 TAX1BP3O14907 124 aa8.18□□□□□ -1.1
CLIP1-209ENST00000537178 ODF3L1Q8IXM7 274 aa8.18□□□□□ -1.1
CLIP1-209ENST00000537178 C20orf203Q8NBC4 194 aa8.18□□□□□ -1.1
CLIP1-209ENST00000537178 B9D2Q9BPU9 175 aa8.18□□□□□ -1.1
CLIP1-209ENST00000537178 PRO0255Q9UI72 69 aa8.18□□□□□ -1.1
CLIP1-209ENST00000537178 CLEC2BQ92478 149 aa8.17□□□□□ -1.1
CLIP1-209ENST00000537178 FAM167A-AS1Q96KT0 104 aa8.17□□□□□ -1.1
CLIP1-209ENST00000537178 WI2-2373I1.2A0A1W2PRP0 233 aa8.17□□□□□ -1.1
CLIP1-209ENST00000537178 Q6ZPA2 131 aa8.17□□□□□ -1.1
CLIP1-209ENST00000537178 C5orf56Q8N8D9 126 aa8.17□□□□□ -1.1
CLIP1-209ENST00000537178 BPY2O14599 106 aa8.17□□□□□ -1.1
CLIP1-209ENST00000537178 IGKV4-1P06312 121 aa8.17□□□□□ -1.1
CLIP1-209ENST00000537178 GTSF1Q8WW33 167 aa8.17□□□□□ -1.1
CLIP1-209ENST00000537178 PRAC2D3DTV9 90 aa8.17□□□□□ -1.1
CLIP1-209ENST00000537178 GRNP28799 593 aaKnown RBP8.17□□□□□ -1.1
CLIP1-209ENST00000537178 FAM110AQ9BQ89 295 aa8.16□□□□□ -1.1
CLIP1-209ENST00000537178 DEFB135Q30KP9 77 aa8.16□□□□□ -1.1
CLIP1-209ENST00000537178 C10orf105Q8TEF2 133 aa8.16□□□□□ -1.1
CLIP1-209ENST00000537178 TEX22C9J3V5 150 aa8.16□□□□□ -1.1
CLIP1-209ENST00000537178 SMAD5-AS1Q9Y6J3 95 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms