RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 TRAV8-3A0A0A6YYJ7 113 aa11.47□□□□□ -0.57
SFSWAP-205ENST00000537164 F5H697 171 aa11.47□□□□□ -0.57
SFSWAP-205ENST00000537164 PSCAO43653 123 aa11.47□□□□□ -0.57
SFSWAP-205ENST00000537164 SSTP61278 116 aa11.47□□□□□ -0.57
SFSWAP-205ENST00000537164 TOR2AQ5JU69 321 aa11.47□□□□□ -0.57
SFSWAP-205ENST00000537164 FAM210AQ96ND0 272 aa11.47□□□□□ -0.57
SFSWAP-205ENST00000537164 RPP21Q9H633 154 aaKnown RBP11.47□□□□□ -0.57
SFSWAP-205ENST00000537164 Q9HAA7 133 aa11.47□□□□□ -0.57
SFSWAP-205ENST00000537164 M0QY20 66 aa11.46□□□□□ -0.57
SFSWAP-205ENST00000537164 NTF3P20783 257 aa11.46□□□□□ -0.57
SFSWAP-205ENST00000537164 FAM231DQ6ZW35 169 aa11.46□□□□□ -0.57
SFSWAP-205ENST00000537164 TM2D2Q9BX73 214 aa11.46□□□□□ -0.57
SFSWAP-205ENST00000537164 RNASE7Q9H1E1 156 aaKnown RBP11.46□□□□□ -0.57
SFSWAP-205ENST00000537164 URGCP-MRPS24S4R325 110 aa11.46□□□□□ -0.57
SFSWAP-205ENST00000537164 TRGC1P0CF51 173 aa11.45□□□□□ -0.58
SFSWAP-205ENST00000537164 TMEM97Q5BJF2 176 aa11.45□□□□□ -0.58
SFSWAP-205ENST00000537164 DNAJC30Q96LL9 226 aa11.45□□□□□ -0.58
SFSWAP-205ENST00000537164 H7C1H1 209 aa11.44□□□□□ -0.58
SFSWAP-205ENST00000537164 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.44□□□□□ -0.58
SFSWAP-205ENST00000537164 KRTAP17-1Q9BYP8 105 aa11.44□□□□□ -0.58
SFSWAP-205ENST00000537164 EIF5A2Q9GZV4 153 aaKnown RBP11.44□□□□□ -0.58
SFSWAP-205ENST00000537164 COX11Q9Y6N1 276 aa11.44□□□□□ -0.58
SFSWAP-205ENST00000537164 A0A087WX48 190 aa11.43□□□□□ -0.58
SFSWAP-205ENST00000537164 ELOBQ15370 118 aa11.43□□□□□ -0.58
SFSWAP-205ENST00000537164 SUMO4Q6EEV6 95 aa11.43□□□□□ -0.58
SFSWAP-205ENST00000537164 NTM-AS1Q6ZSK4 140 aa11.43□□□□□ -0.58
SFSWAP-205ENST00000537164 NTN5Q8WTR8 489 aaPredicted RBP11.43□□□□□ -0.58
SFSWAP-205ENST00000537164 DPH3P1Q9H4G8 78 aa11.43□□□□□ -0.58
SFSWAP-205ENST00000537164 FUSP35637 526 aaKnown RBP eCLIP11.42□□□□□ -0.58
SFSWAP-205ENST00000537164 CT83Q5H943 113 aa11.42□□□□□ -0.58
SFSWAP-205ENST00000537164 ATRAIDQ6UW56 229 aa11.42□□□□□ -0.58
SFSWAP-205ENST00000537164 Q8N814 137 aa11.42□□□□□ -0.58
SFSWAP-205ENST00000537164 GTSF1Q8WW33 167 aa11.42□□□□□ -0.58
SFSWAP-205ENST00000537164 MGPP08493 103 aa11.41□□□□□ -0.58
SFSWAP-205ENST00000537164 SRP19P09132 144 aaKnown RBP11.41□□□□□ -0.58
SFSWAP-205ENST00000537164 FOXA3P55318 350 aaPredicted RBP11.41□□□□□ -0.58
SFSWAP-205ENST00000537164 PKIAP61925 76 aa11.41□□□□□ -0.58
SFSWAP-205ENST00000537164 SMIM7Q9BQ49 75 aa11.41□□□□□ -0.58
SFSWAP-205ENST00000537164 KLK12Q9UKR0 248 aa11.41□□□□□ -0.58
SFSWAP-205ENST00000537164 A8MWL6 223 aa11.4□□□□□ -0.58
SFSWAP-205ENST00000537164 GATCO43716 136 aaKnown RBP11.4□□□□□ -0.58
SFSWAP-205ENST00000537164 KCNIP4Q6PIL6 250 aa11.4□□□□□ -0.58
SFSWAP-205ENST00000537164 RASL11AQ6T310 242 aa11.4□□□□□ -0.58
SFSWAP-205ENST00000537164 LINC01551Q86U37 167 aa11.4□□□□□ -0.58
SFSWAP-205ENST00000537164 MAPKAPK5-AS1Q8N8E1 139 aa11.4□□□□□ -0.58
SFSWAP-205ENST00000537164 FRZBQ92765 325 aa11.4□□□□□ -0.58
SFSWAP-205ENST00000537164 RMI2Q96E14 147 aa11.4□□□□□ -0.58
SFSWAP-205ENST00000537164 CEBPGP53567 150 aa11.39□□□□□ -0.59
SFSWAP-205ENST00000537164 KRTAP10-1P60331 282 aa11.39□□□□□ -0.59
SFSWAP-205ENST00000537164 Q0VG73 95 aa11.39□□□□□ -0.59
SFSWAP-205ENST00000537164 TWIST1Q15672 202 aa11.39□□□□□ -0.59
SFSWAP-205ENST00000537164 IQCJQ1A5X6 159 aa11.39□□□□□ -0.59
SFSWAP-205ENST00000537164 TEX261Q6UWH6 196 aa11.39□□□□□ -0.59
SFSWAP-205ENST00000537164 KRTAP4-5Q9BYR2 181 aa11.39□□□□□ -0.59
SFSWAP-205ENST00000537164 NIT2Q9NQR4 276 aa11.39□□□□□ -0.59
SFSWAP-205ENST00000537164 GCSHP23434 173 aa11.38□□□□□ -0.59
SFSWAP-205ENST00000537164 MPV17L2Q567V2 206 aa11.38□□□□□ -0.59
SFSWAP-205ENST00000537164 Q8N1X5 172 aa11.38□□□□□ -0.59
SFSWAP-205ENST00000537164 ABCA13Q86UQ4 5058 aa11.38□□□□□ -0.59
SFSWAP-205ENST00000537164 TRBV25-1A0A075B6N4 114 aa11.37□□□□□ -0.59
SFSWAP-205ENST00000537164 FAM231BA6NCW3 169 aa11.37□□□□□ -0.59
SFSWAP-205ENST00000537164 ZNF727A8MUV8 499 aa11.37□□□□□ -0.59
SFSWAP-205ENST00000537164 TMEM262E9PQX1 116 aa11.37□□□□□ -0.59
SFSWAP-205ENST00000537164 WFDC2Q14508 124 aa11.37□□□□□ -0.59
SFSWAP-205ENST00000537164 UBE2WQ96B02 151 aa11.37□□□□□ -0.59
SFSWAP-205ENST00000537164 PGLYRP4Q96LB8 373 aa11.37□□□□□ -0.59
SFSWAP-205ENST00000537164 CHCHD5Q9BSY4 110 aa11.37□□□□□ -0.59
SFSWAP-205ENST00000537164 OSTCQ9NRP0 149 aa11.37□□□□□ -0.59
SFSWAP-205ENST00000537164 IGLV5-52A0A0A0MRZ9 124 aa11.36□□□□□ -0.59
SFSWAP-205ENST00000537164 XGP55808 180 aa11.36□□□□□ -0.59
SFSWAP-205ENST00000537164 FAM74A3Q4VXF1 159 aa11.36□□□□□ -0.59
SFSWAP-205ENST00000537164 ENHOQ6UWT2 76 aa11.36□□□□□ -0.59
SFSWAP-205ENST00000537164 GFRA4Q9GZZ7 299 aa11.36□□□□□ -0.59
SFSWAP-205ENST00000537164 IGKV2D-24A0A075B6R9 120 aa11.35□□□□□ -0.59
SFSWAP-205ENST00000537164 IGHV1-24A0A0C4DH33 117 aa11.35□□□□□ -0.59
SFSWAP-205ENST00000537164 GATD1Q8NB37 220 aa11.35□□□□□ -0.59
SFSWAP-205ENST00000537164 TSKUQ8WUA8 353 aa11.35□□□□□ -0.59
SFSWAP-205ENST00000537164 SMDT1Q9H4I9 107 aa11.35□□□□□ -0.59
SFSWAP-205ENST00000537164 PRR34Q9NV39 138 aa11.35□□□□□ -0.59
SFSWAP-205ENST00000537164 SMIM15Q7Z3B0 74 aa11.34□□□□□ -0.59
SFSWAP-205ENST00000537164 C15orf54Q8N8G6 183 aa11.34□□□□□ -0.59
SFSWAP-205ENST00000537164 Q8N976 141 aa11.34□□□□□ -0.59
SFSWAP-205ENST00000537164 ANGP03950 147 aaKnown RBP11.33□□□□□ -0.6
SFSWAP-205ENST00000537164 RBX1P62877 108 aa11.33□□□□□ -0.6
SFSWAP-205ENST00000537164 MIAQ16674 131 aa11.33□□□□□ -0.6
SFSWAP-205ENST00000537164 BAALCQ8WXS3 180 aa11.33□□□□□ -0.6
SFSWAP-205ENST00000537164 A0A1B0GUV1 79 aa11.32□□□□□ -0.6
SFSWAP-205ENST00000537164 HIGD1CA8MV81 97 aa11.32□□□□□ -0.6
SFSWAP-205ENST00000537164 C9JQL5 133 aa11.32□□□□□ -0.6
SFSWAP-205ENST00000537164 CRPP02741 224 aa11.32□□□□□ -0.6
SFSWAP-205ENST00000537164 TMEM241Q24JQ0 296 aa11.32□□□□□ -0.6
SFSWAP-205ENST00000537164 ISOC2Q96AB3 205 aa11.32□□□□□ -0.6
SFSWAP-205ENST00000537164 TMEM70Q9BUB7 260 aa11.32□□□□□ -0.6
SFSWAP-205ENST00000537164 C1orf43Q9BWL3 253 aa11.32□□□□□ -0.6
SFSWAP-205ENST00000537164 V9GYV3 84 aa11.32□□□□□ -0.6
SFSWAP-205ENST00000537164 TRAV26-2A0A0B4J265 109 aa11.31□□□□□ -0.6
SFSWAP-205ENST00000537164 A0A1B0GUT8 65 aa11.31□□□□□ -0.6
SFSWAP-205ENST00000537164 LECT2O14960 151 aa11.31□□□□□ -0.6
SFSWAP-205ENST00000537164 GAGE6Q13070 117 aa11.31□□□□□ -0.6
SFSWAP-205ENST00000537164 RPL23P62829 140 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 146 ms