RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 GAGE12JA6NER3 117 aa6.27□□□□□ -1.41
ABCA4-207ENST00000536513 GAGE7O76087 117 aa6.27□□□□□ -1.41
ABCA4-207ENST00000536513 GAGE12FP0CL80 117 aa6.27□□□□□ -1.41
ABCA4-207ENST00000536513 GAGE12GP0CL81 117 aa6.27□□□□□ -1.41
ABCA4-207ENST00000536513 GAGE12IP0CL82 117 aa6.27□□□□□ -1.41
ABCA4-207ENST00000536513 GAGE4Q13068 117 aa6.27□□□□□ -1.41
ABCA4-207ENST00000536513 FAM74A4Q5TZK3 123 aa6.27□□□□□ -1.41
ABCA4-207ENST00000536513 Q6YL49 198 aa6.27□□□□□ -1.41
ABCA4-207ENST00000536513 NEGR1Q7Z3B1 354 aa6.27□□□□□ -1.41
ABCA4-207ENST00000536513 APRG1Q8IVJ8 170 aa6.27□□□□□ -1.41
ABCA4-207ENST00000536513 DAZ1Q9NQZ3 744 aaKnown RBP6.27□□□□□ -1.41
ABCA4-207ENST00000536513 KNCNA6PVL3 124 aa6.27□□□□□ -1.41
ABCA4-207ENST00000536513 Q6ZSV7 163 aa6.27□□□□□ -1.41
ABCA4-207ENST00000536513 OR10J6PQ8NGY7 276 aa6.27□□□□□ -1.41
ABCA4-207ENST00000536513 PPDPFLQ8WWR9 84 aa6.27□□□□□ -1.41
ABCA4-207ENST00000536513 UBE2E2Q96LR5 201 aa6.27□□□□□ -1.41
ABCA4-207ENST00000536513 SMIM9A6NGZ8 99 aa6.26□□□□□ -1.41
ABCA4-207ENST00000536513 BUB3O43684 328 aa6.26□□□□□ -1.41
ABCA4-207ENST00000536513 RRN3P1Q2M238 152 aa6.26□□□□□ -1.41
ABCA4-207ENST00000536513 C10orf126Q8N4M7 172 aa6.26□□□□□ -1.41
ABCA4-207ENST00000536513 MBD6Q96DN6 1003 aa6.26□□□□□ -1.41
ABCA4-207ENST00000536513 SPANXB1Q9NS25 103 aaPredicted RBP6.26□□□□□ -1.41
ABCA4-207ENST00000536513 TRAV12-3A0A0B4J271 114 aa6.26□□□□□ -1.41
ABCA4-207ENST00000536513 HLA-DRB4P13762 266 aa6.26□□□□□ -1.41
ABCA4-207ENST00000536513 LGALS3P17931 250 aaKnown RBP6.26□□□□□ -1.41
ABCA4-207ENST00000536513 UFSP1Q6NVU6 142 aa6.26□□□□□ -1.41
ABCA4-207ENST00000536513 C1QTNF4Q9BXJ3 329 aa6.26□□□□□ -1.41
ABCA4-207ENST00000536513 GFRA4Q9GZZ7 299 aa6.26□□□□□ -1.41
ABCA4-207ENST00000536513 HLA-DRB4X5D2U9 266 aa6.26□□□□□ -1.41
ABCA4-207ENST00000536513 IGHV3-64A0A075B6Q5 118 aa6.26□□□□□ -1.41
ABCA4-207ENST00000536513 SH2D1AO60880 128 aa6.26□□□□□ -1.41
ABCA4-207ENST00000536513 GATA1P15976 413 aaPredicted RBP6.26□□□□□ -1.41
ABCA4-207ENST00000536513 DEFB131AP59861 70 aa6.26□□□□□ -1.41
ABCA4-207ENST00000536513 FOXE3Q13461 319 aa6.26□□□□□ -1.41
ABCA4-207ENST00000536513 SPINK13Q1W4C9 94 aa6.26□□□□□ -1.41
ABCA4-207ENST00000536513 URB1-AS1Q96HZ7 61 aa6.26□□□□□ -1.41
ABCA4-207ENST00000536513 ZNF492Q9P255 531 aa6.26□□□□□ -1.41
ABCA4-207ENST00000536513 PKIGQ9Y2B9 76 aa6.26□□□□□ -1.41
ABCA4-207ENST00000536513 TRAV2A0A0B4J234 112 aa6.25□□□□□ -1.41
ABCA4-207ENST00000536513 STHQ8IWL8 128 aa6.25□□□□□ -1.41
ABCA4-207ENST00000536513 FAM223BA6NKX1 122 aa6.25□□□□□ -1.41
ABCA4-207ENST00000536513 FNDC10F2Z333 226 aa6.25□□□□□ -1.41
ABCA4-207ENST00000536513 RPL35AP18077 110 aaKnown RBP6.25□□□□□ -1.41
ABCA4-207ENST00000536513 FOXI1Q12951 378 aa6.25□□□□□ -1.41
ABCA4-207ENST00000536513 FAM223AQ8IWN6 122 aa6.25□□□□□ -1.41
ABCA4-207ENST00000536513 MRAPQ8TCY5 172 aa6.25□□□□□ -1.41
ABCA4-207ENST00000536513 BAALCQ8WXS3 180 aa6.25□□□□□ -1.41
ABCA4-207ENST00000536513 PPDPFQ9H3Y8 114 aa6.25□□□□□ -1.41
ABCA4-207ENST00000536513 KLK9Q9UKQ9 250 aa6.25□□□□□ -1.41
ABCA4-207ENST00000536513 TRAV8-4A0A0B4J246 113 aa6.25□□□□□ -1.41
ABCA4-207ENST00000536513 A0A1B0GXF2 115 aa6.25□□□□□ -1.41
ABCA4-207ENST00000536513 COX6CP09669 75 aa6.25□□□□□ -1.41
ABCA4-207ENST00000536513 USMG5Q96IX5 58 aa6.25□□□□□ -1.41
ABCA4-207ENST00000536513 KLF12Q9Y4X4 402 aa6.25□□□□□ -1.41
ABCA4-207ENST00000536513 IGHV3-73A0A0B4J1V6 119 aa6.24□□□□□ -1.41
ABCA4-207ENST00000536513 CRXO43186 299 aaPredicted RBP6.24□□□□□ -1.41
ABCA4-207ENST00000536513 OR13C6PQ8NH95 151 aa6.24□□□□□ -1.41
ABCA4-207ENST00000536513 ZNF702PQ9H963 129 aa6.24□□□□□ -1.41
ABCA4-207ENST00000536513 SMAD5-AS1Q9Y6J3 95 aa6.24□□□□□ -1.41
ABCA4-207ENST00000536513 MUC4Q99102 2169 aa6.24□□□□□ -1.41
ABCA4-207ENST00000536513 IGKV2D-26A0A0A0MRZ7 120 aa6.24□□□□□ -1.41
ABCA4-207ENST00000536513 FABP5P3A8MUU1 101 aa6.24□□□□□ -1.41
ABCA4-207ENST00000536513 KRTAP1-3Q8IUG1 177 aa6.24□□□□□ -1.41
ABCA4-207ENST00000536513 MSRB1Q9NZV6 116 aa6.24□□□□□ -1.41
ABCA4-207ENST00000536513 A0A096LNT2 108 aa6.24□□□□□ -1.41
ABCA4-207ENST00000536513 FGF6P10767 208 aa6.24□□□□□ -1.41
ABCA4-207ENST00000536513 AGPAT4-IT1Q9H0P7 198 aa6.24□□□□□ -1.41
ABCA4-207ENST00000536513 PHLDA3Q9Y5J5 127 aa6.24□□□□□ -1.41
ABCA4-207ENST00000536513 TRAV26-2A0A0B4J265 109 aa6.23□□□□□ -1.41
ABCA4-207ENST00000536513 LAGE3Q14657 143 aa6.23□□□□□ -1.41
ABCA4-207ENST00000536513 MEIG1Q5JSS6 88 aa6.23□□□□□ -1.41
ABCA4-207ENST00000536513 XCL2Q9UBD3 114 aa6.23□□□□□ -1.41
ABCA4-207ENST00000536513 SNRPD3P62318 126 aaKnown RBP6.23□□□□□ -1.41
ABCA4-207ENST00000536513 WFDC10AQ9H1F0 79 aa6.23□□□□□ -1.41
ABCA4-207ENST00000536513 WI2-2373I1.2A0A1W2PRP0 233 aa6.23□□□□□ -1.41
ABCA4-207ENST00000536513 INS-IGF2F8WCM5 200 aa6.23□□□□□ -1.41
ABCA4-207ENST00000536513 IFITM1P13164 125 aa6.23□□□□□ -1.41
ABCA4-207ENST00000536513 ZNF56Q15929 161 aa6.22□□□□□ -1.41
ABCA4-207ENST00000536513 Q6ZUT4 128 aa6.22□□□□□ -1.41
ABCA4-207ENST00000536513 ZFAND3Q9H8U3 227 aa6.22□□□□□ -1.41
ABCA4-207ENST00000536513 ERG28Q9UKR5 140 aa6.22□□□□□ -1.41
ABCA4-207ENST00000536513 IGHV7-4-1A0A0J9YVY3 117 aa6.22□□□□□ -1.41
ABCA4-207ENST00000536513 CD7P09564 240 aa6.22□□□□□ -1.41
ABCA4-207ENST00000536513 ZNF80P51504 273 aaPredicted RBP6.22□□□□□ -1.41
ABCA4-207ENST00000536513 TMEM61Q8N0U2 210 aa6.22□□□□□ -1.41
ABCA4-207ENST00000536513 LINC01006Q8NI28 216 aa6.22□□□□□ -1.41
ABCA4-207ENST00000536513 NTN5Q8WTR8 489 aaPredicted RBP6.22□□□□□ -1.41
ABCA4-207ENST00000536513 C20orf173Q96LM9 149 aa6.22□□□□□ -1.41
ABCA4-207ENST00000536513 CLPSL1A2RUU4 121 aa6.22□□□□□ -1.41
ABCA4-207ENST00000536513 H7C1H1 209 aa6.22□□□□□ -1.41
ABCA4-207ENST00000536513 CCL24O00175 119 aa6.22□□□□□ -1.41
ABCA4-207ENST00000536513 NDUFA4O00483 81 aa6.22□□□□□ -1.41
ABCA4-207ENST00000536513 NPC2P61916 151 aa6.22□□□□□ -1.41
ABCA4-207ENST00000536513 FHL3Q13643 280 aa6.22□□□□□ -1.41
ABCA4-207ENST00000536513 PRADC1Q9BSG0 188 aa6.22□□□□□ -1.41
ABCA4-207ENST00000536513 MYMXA0A1B0GTQ4 84 aa6.21□□□□□ -1.41
ABCA4-207ENST00000536513 LINC01619G3V211 115 aa6.21□□□□□ -1.41
ABCA4-207ENST00000536513 PLNP26678 52 aa6.21□□□□□ -1.41
ABCA4-207ENST00000536513 KIR2DL4Q99706 377 aa6.21□□□□□ -1.41
ABCA4-207ENST00000536513 IGHG4P01861 327 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms