RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 C19orf71A6NCJ1 209 aa6.58□□□□□ -1.36
CLSTN3-203ENST00000534830 RAB5CP51148 216 aa6.58□□□□□ -1.36
CLSTN3-203ENST00000534830 Q0VG73 95 aa6.58□□□□□ -1.36
CLSTN3-203ENST00000534830 ELOBQ15370 118 aa6.58□□□□□ -1.36
CLSTN3-203ENST00000534830 ENHOQ6UWT2 76 aa6.58□□□□□ -1.36
CLSTN3-203ENST00000534830 NTM-AS1Q6ZSK4 140 aa6.58□□□□□ -1.36
CLSTN3-203ENST00000534830 Q8N976 141 aa6.58□□□□□ -1.36
CLSTN3-203ENST00000534830 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.57□□□□□ -1.36
CLSTN3-203ENST00000534830 IGKV2D-24A0A075B6R9 120 aa6.57□□□□□ -1.36
CLSTN3-203ENST00000534830 A0A087WX48 190 aa6.57□□□□□ -1.36
CLSTN3-203ENST00000534830 MUC21A0A0G2JKD1 596 aa6.57□□□□□ -1.36
CLSTN3-203ENST00000534830 MUC21A0A140T8X8 626 aa6.57□□□□□ -1.36
CLSTN3-203ENST00000534830 IGLC6P0CF74 106 aa6.57□□□□□ -1.36
CLSTN3-203ENST00000534830 SULT1A2P50226 295 aa6.57□□□□□ -1.36
CLSTN3-203ENST00000534830 ZNF56Q15929 161 aa6.57□□□□□ -1.36
CLSTN3-203ENST00000534830 SPANXN1Q5VSR9 72 aa6.57□□□□□ -1.36
CLSTN3-203ENST00000534830 UBE2WQ96B02 151 aa6.57□□□□□ -1.36
CLSTN3-203ENST00000534830 SMIM12Q96EX1 92 aa6.57□□□□□ -1.36
CLSTN3-203ENST00000534830 GNG13Q9P2W3 67 aa6.57□□□□□ -1.36
CLSTN3-203ENST00000534830 MPV17L2Q567V2 206 aa6.56□□□□□ -1.36
CLSTN3-203ENST00000534830 PKHD1L1Q86WI1 4243 aa6.55□□□□□ -1.36
CLSTN3-203ENST00000534830 RAB19A4D1S5 217 aa6.55□□□□□ -1.36
CLSTN3-203ENST00000534830 RBFOX3A6NFN3 312 aa6.55□□□□□ -1.36
CLSTN3-203ENST00000534830 TMEM262E9PQX1 116 aa6.55□□□□□ -1.36
CLSTN3-203ENST00000534830 M0QY20 66 aa6.55□□□□□ -1.36
CLSTN3-203ENST00000534830 GZMBP10144 247 aa6.55□□□□□ -1.36
CLSTN3-203ENST00000534830 LINC01620Q4KN68 170 aa6.55□□□□□ -1.36
CLSTN3-203ENST00000534830 TMEM97Q5BJF2 176 aa6.55□□□□□ -1.36
CLSTN3-203ENST00000534830 CENPWQ5EE01 88 aa6.55□□□□□ -1.36
CLSTN3-203ENST00000534830 KCNIP4Q6PIL6 250 aa6.55□□□□□ -1.36
CLSTN3-203ENST00000534830 TCTE3Q8IZS6 198 aa6.55□□□□□ -1.36
CLSTN3-203ENST00000534830 PRR34Q9NV39 138 aa6.55□□□□□ -1.36
CLSTN3-203ENST00000534830 LRP2P98164 4655 aa6.55□□□□□ -1.36
CLSTN3-203ENST00000534830 TRBV20OR9-2A0A075B6H5 130 aa6.54□□□□□ -1.36
CLSTN3-203ENST00000534830 RPS20P60866 119 aaKnown RBP6.54□□□□□ -1.36
CLSTN3-203ENST00000534830 PKIAP61925 76 aa6.54□□□□□ -1.36
CLSTN3-203ENST00000534830 MEF2BQ02080 365 aaPredicted RBP6.54□□□□□ -1.36
CLSTN3-203ENST00000534830 IQCJQ1A5X6 159 aa6.54□□□□□ -1.36
CLSTN3-203ENST00000534830 EIF5AL1Q6IS14 154 aaKnown RBP6.54□□□□□ -1.36
CLSTN3-203ENST00000534830 KRTAP26-1Q6PEX3 210 aa6.54□□□□□ -1.36
CLSTN3-203ENST00000534830 C15orf54Q8N8G6 183 aa6.54□□□□□ -1.36
CLSTN3-203ENST00000534830 FER1L6-AS1Q8NA97 138 aa6.54□□□□□ -1.36
CLSTN3-203ENST00000534830 AP1S3Q96PC3 154 aa6.54□□□□□ -1.36
CLSTN3-203ENST00000534830 F5H697 171 aa6.53□□□□□ -1.36
CLSTN3-203ENST00000534830 TEX46H3BTG2 121 aa6.53□□□□□ -1.36
CLSTN3-203ENST00000534830 PDE6DO43924 150 aa6.53□□□□□ -1.36
CLSTN3-203ENST00000534830 ANGP03950 147 aaKnown RBP6.53□□□□□ -1.36
CLSTN3-203ENST00000534830 SMIM17P0DL12 118 aa6.53□□□□□ -1.36
CLSTN3-203ENST00000534830 KRTAP10-4P60372 401 aaPredicted RBP6.53□□□□□ -1.36
CLSTN3-203ENST00000534830 SSTP61278 116 aa6.53□□□□□ -1.36
CLSTN3-203ENST00000534830 CACNG7P62955 275 aa6.53□□□□□ -1.36
CLSTN3-203ENST00000534830 SCXQ7RTU7 201 aa6.53□□□□□ -1.36
CLSTN3-203ENST00000534830 OR2D3Q8NGH3 330 aa6.53□□□□□ -1.36
CLSTN3-203ENST00000534830 DAZAP1Q96EP5 407 aaKnown RBP6.53□□□□□ -1.36
CLSTN3-203ENST00000534830 C1orf43Q9BWL3 253 aa6.53□□□□□ -1.36
CLSTN3-203ENST00000534830 F2Z2F3 143 aa6.52□□□□□ -1.37
CLSTN3-203ENST00000534830 BCL2P10415 239 aa6.52□□□□□ -1.37
CLSTN3-203ENST00000534830 GNG4P50150 75 aa6.52□□□□□ -1.37
CLSTN3-203ENST00000534830 RBX1P62877 108 aa6.52□□□□□ -1.37
CLSTN3-203ENST00000534830 MIAQ16674 131 aa6.52□□□□□ -1.37
CLSTN3-203ENST00000534830 C14orf177Q52M58 125 aa6.52□□□□□ -1.37
CLSTN3-203ENST00000534830 SUMO4Q6EEV6 95 aa6.52□□□□□ -1.37
CLSTN3-203ENST00000534830 WDR73Q6P4I2 378 aa6.52□□□□□ -1.37
CLSTN3-203ENST00000534830 SLC51BQ86UW2 128 aa6.52□□□□□ -1.37
CLSTN3-203ENST00000534830 C9orf62Q8N4C0 152 aa6.52□□□□□ -1.37
CLSTN3-203ENST00000534830 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.52□□□□□ -1.37
CLSTN3-203ENST00000534830 CHCHD5Q9BSY4 110 aa6.52□□□□□ -1.37
CLSTN3-203ENST00000534830 CHAC1Q9BUX1 264 aa6.52□□□□□ -1.37
CLSTN3-203ENST00000534830 CNFNQ9BYD5 112 aa6.52□□□□□ -1.37
CLSTN3-203ENST00000534830 TRBV25-1A0A075B6N4 114 aa6.51□□□□□ -1.37
CLSTN3-203ENST00000534830 P01737 135 aa6.51□□□□□ -1.37
CLSTN3-203ENST00000534830 CRPP02741 224 aa6.51□□□□□ -1.37
CLSTN3-203ENST00000534830 NTF3P20783 257 aa6.51□□□□□ -1.37
CLSTN3-203ENST00000534830 LYZL1Q6UWQ5 148 aa6.51□□□□□ -1.37
CLSTN3-203ENST00000534830 NUDT10Q8NFP7 164 aa6.51□□□□□ -1.37
CLSTN3-203ENST00000534830 CIRBP-AS1Q8TBR5 109 aa6.51□□□□□ -1.37
CLSTN3-203ENST00000534830 NUDT11Q96G61 164 aa6.51□□□□□ -1.37
CLSTN3-203ENST00000534830 BIN3Q9NQY0 253 aa6.51□□□□□ -1.37
CLSTN3-203ENST00000534830 MED9Q9NWA0 146 aa6.51□□□□□ -1.37
CLSTN3-203ENST00000534830 IGHV1-24A0A0C4DH33 117 aa6.5□□□□□ -1.37
CLSTN3-203ENST00000534830 KRTAP9-6A0A140TA67 174 aa6.5□□□□□ -1.37
CLSTN3-203ENST00000534830 A0A1B0GUV1 79 aa6.5□□□□□ -1.37
CLSTN3-203ENST00000534830 XKRY2A2RUG3 117 aa6.5□□□□□ -1.37
CLSTN3-203ENST00000534830 USP17L23D6RBM5 183 aa6.5□□□□□ -1.37
CLSTN3-203ENST00000534830 H7C1H1 209 aa6.5□□□□□ -1.37
CLSTN3-203ENST00000534830 K7EN84 100 aa6.5□□□□□ -1.37
CLSTN3-203ENST00000534830 IFNA1P01562 189 aa6.5□□□□□ -1.37
CLSTN3-203ENST00000534830 PRSS1P07477 247 aa6.5□□□□□ -1.37
CLSTN3-203ENST00000534830 TAGLN2P37802 199 aaKnown RBP6.5□□□□□ -1.37
CLSTN3-203ENST00000534830 CTRLP40313 264 aa6.5□□□□□ -1.37
CLSTN3-203ENST00000534830 GAGE6Q13070 117 aa6.5□□□□□ -1.37
CLSTN3-203ENST00000534830 Q6ZNX1 250 aa6.5□□□□□ -1.37
CLSTN3-203ENST00000534830 LINC00269Q8N2A0 174 aa6.5□□□□□ -1.37
CLSTN3-203ENST00000534830 C20orf203Q8NBC4 194 aa6.5□□□□□ -1.37
CLSTN3-203ENST00000534830 PGLYRP4Q96LB8 373 aa6.5□□□□□ -1.37
CLSTN3-203ENST00000534830 TPPP3Q9BW30 176 aa6.5□□□□□ -1.37
CLSTN3-203ENST00000534830 KRTAP9-2Q9BYQ4 174 aa6.5□□□□□ -1.37
CLSTN3-203ENST00000534830 DPH3P1Q9H4G8 78 aa6.5□□□□□ -1.37
CLSTN3-203ENST00000534830 MGPP08493 103 aa6.49□□□□□ -1.37
CLSTN3-203ENST00000534830 TRGC1P0CF51 173 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms