RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	NACA	E9PAV3	2078 aa		11.95	□□□□□ -0.5
NCAPD3-213	ENST00000534532		K7EQG2	157 aa		11.95	□□□□□ -0.5
NCAPD3-213	ENST00000534532	LYPD6B	Q8NI32	183 aa		11.95	□□□□□ -0.5
NCAPD3-213	ENST00000534532	TRBV6-1	A0A0K0K1D8	114 aa		11.94	□□□□□ -0.5
NCAPD3-213	ENST00000534532	LINC01545	Q5VT33	79 aa		11.94	□□□□□ -0.5
NCAPD3-213	ENST00000534532	MIF	P14174	115 aa		11.94	□□□□□ -0.5
NCAPD3-213	ENST00000534532	COL4A4	P53420	1690 aa	Predicted RBP	11.94	□□□□□ -0.5
NCAPD3-213	ENST00000534532	CCL25	O15444	150 aa		11.94	□□□□□ -0.5
NCAPD3-213	ENST00000534532	C9orf118	A6NHY6	69 aa		11.93	□□□□□ -0.5
NCAPD3-213	ENST00000534532	COL4A3	Q01955	1670 aa		11.93	□□□□□ -0.5
NCAPD3-213	ENST00000534532	TINCR	A0A1B0GVN0	87 aa		11.93	□□□□□ -0.5
NCAPD3-213	ENST00000534532	PSMG3-AS1	Q96PY0	264 aa		11.93	□□□□□ -0.5
NCAPD3-213	ENST00000534532	ABCA2	Q9BZC7	2435 aa		11.93	□□□□□ -0.5
NCAPD3-213	ENST00000534532	CFC1B	P0CG36	223 aa		11.93	□□□□□ -0.5
NCAPD3-213	ENST00000534532	CFC1	P0CG37	223 aa		11.93	□□□□□ -0.5
NCAPD3-213	ENST00000534532	LINC01006	Q8NI28	216 aa		11.93	□□□□□ -0.5
NCAPD3-213	ENST00000534532		H0YGX0	51 aa		11.92	□□□□□ -0.5
NCAPD3-213	ENST00000534532	OPRPN	Q99935	248 aa	Predicted RBP	11.92	□□□□□ -0.5
NCAPD3-213	ENST00000534532	DLEU1	O43261	78 aa		11.92	□□□□□ -0.5
NCAPD3-213	ENST00000534532	CTRL	P40313	264 aa		11.92	□□□□□ -0.5
NCAPD3-213	ENST00000534532		Q6ZVH6	145 aa		11.92	□□□□□ -0.5
NCAPD3-213	ENST00000534532		Q6ZTI0	123 aa		11.92	□□□□□ -0.5
NCAPD3-213	ENST00000534532	PPDPFL	Q8WWR9	84 aa		11.92	□□□□□ -0.5
NCAPD3-213	ENST00000534532	NDUFB1	O75438	58 aa		11.91	□□□□□ -0.5
NCAPD3-213	ENST00000534532	RPL39	P62891	51 aa	Known RBP	11.91	□□□□□ -0.5
NCAPD3-213	ENST00000534532	KMT2E	Q8IZD2	1858 aa		11.91	□□□□□ -0.5
NCAPD3-213	ENST00000534532	GAGE12H	A6NDE8	117 aa		11.91	□□□□□ -0.5
NCAPD3-213	ENST00000534532	TRAV12-1	A0A0B4J245	112 aa		11.9	□□□□□ -0.5
NCAPD3-213	ENST00000534532	FAM110A	Q9BQ89	295 aa		11.9	□□□□□ -0.5
NCAPD3-213	ENST00000534532	LINC00482	Q8N8I6	264 aa		11.9	□□□□□ -0.51
NCAPD3-213	ENST00000534532		H3BQ85	93 aa		11.89	□□□□□ -0.51
NCAPD3-213	ENST00000534532	CRYGD	P07320	174 aa		11.89	□□□□□ -0.51
NCAPD3-213	ENST00000534532	LY6L	H3BQJ8	138 aa		11.89	□□□□□ -0.51
NCAPD3-213	ENST00000534532	IGKV1D-37	A0A075B6S9	117 aa		11.89	□□□□□ -0.51
NCAPD3-213	ENST00000534532	TRAV10	A0A0B4J240	114 aa		11.89	□□□□□ -0.51
NCAPD3-213	ENST00000534532	CHD3	Q12873	2000 aa	Known RBP	11.89	□□□□□ -0.51
NCAPD3-213	ENST00000534532	ZNF702P	Q9H963	129 aa		11.88	□□□□□ -0.51
NCAPD3-213	ENST00000534532	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	11.88	□□□□□ -0.51
NCAPD3-213	ENST00000534532	GTSF1L	Q9H1H1	148 aa		11.88	□□□□□ -0.51
NCAPD3-213	ENST00000534532	BAALC-AS2	P0C853	105 aa		11.88	□□□□□ -0.51
NCAPD3-213	ENST00000534532	GTSF1	Q8WW33	167 aa		11.88	□□□□□ -0.51
NCAPD3-213	ENST00000534532	IGKV2-24	A0A0C4DH68	120 aa		11.88	□□□□□ -0.51
NCAPD3-213	ENST00000534532	C12orf74	Q32Q52	190 aa		11.88	□□□□□ -0.51
NCAPD3-213	ENST00000534532		F8W1H4	67 aa		11.87	□□□□□ -0.51
NCAPD3-213	ENST00000534532	C20orf203	Q8NBC4	194 aa		11.87	□□□□□ -0.51
NCAPD3-213	ENST00000534532	TOMM6	Q96B49	74 aa		11.87	□□□□□ -0.51
NCAPD3-213	ENST00000534532	B9D2	Q9BPU9	175 aa		11.87	□□□□□ -0.51
NCAPD3-213	ENST00000534532	PRR14L	Q5THK1	2151 aa		11.87	□□□□□ -0.51
NCAPD3-213	ENST00000534532	DENND4A	Q7Z401	1863 aa		11.86	□□□□□ -0.51
NCAPD3-213	ENST00000534532		P0C879	139 aa		11.86	□□□□□ -0.51
NCAPD3-213	ENST00000534532	NCR3	O14931	201 aa		11.86	□□□□□ -0.51
NCAPD3-213	ENST00000534532	REG3A	Q06141	175 aa		11.86	□□□□□ -0.51
NCAPD3-213	ENST00000534532	MBD6	Q96DN6	1003 aa		11.85	□□□□□ -0.51
NCAPD3-213	ENST00000534532	CRYGB	P07316	175 aa		11.85	□□□□□ -0.51
NCAPD3-213	ENST00000534532	DIRC1	Q969H9	104 aa		11.85	□□□□□ -0.51
NCAPD3-213	ENST00000534532	SPANXD	Q9BXN6	97 aa		11.85	□□□□□ -0.51
NCAPD3-213	ENST00000534532	PSMB8	P28062	276 aa		11.84	□□□□□ -0.51
NCAPD3-213	ENST00000534532	LINC00269	Q8N2A0	174 aa		11.84	□□□□□ -0.51
NCAPD3-213	ENST00000534532	CITED1	Q99966	193 aa		11.84	□□□□□ -0.51
NCAPD3-213	ENST00000534532		K7ERJ3	54 aa		11.84	□□□□□ -0.51
NCAPD3-213	ENST00000534532	HIGD2B	Q4VC39	106 aa		11.84	□□□□□ -0.51
NCAPD3-213	ENST00000534532	C10orf99	Q6UWK7	81 aa		11.84	□□□□□ -0.51
NCAPD3-213	ENST00000534532	ETDB	Q3ZM63	59 aa		11.84	□□□□□ -0.51
NCAPD3-213	ENST00000534532	PCP2	Q8IVA1	136 aa		11.84	□□□□□ -0.51
NCAPD3-213	ENST00000534532	BAALC	Q8WXS3	180 aa		11.84	□□□□□ -0.51
NCAPD3-213	ENST00000534532	MUSTN1	Q8IVN3	82 aa		11.84	□□□□□ -0.51
NCAPD3-213	ENST00000534532		A0A1W2PPM0	123 aa		11.83	□□□□□ -0.52
NCAPD3-213	ENST00000534532	ZNF124	Q15973	351 aa		11.83	□□□□□ -0.52
NCAPD3-213	ENST00000534532	TRAC	P01848	142 aa		11.83	□□□□□ -0.52
NCAPD3-213	ENST00000534532	OBSL1	O75147	1896 aa		11.83	□□□□□ -0.52
NCAPD3-213	ENST00000534532	TP53TG3	Q9ULZ0	132 aa		11.82	□□□□□ -0.52
NCAPD3-213	ENST00000534532	PCDH15	Q96QU1	1955 aa		11.82	□□□□□ -0.52
NCAPD3-213	ENST00000534532	C9orf153	Q5TBE3	101 aa		11.82	□□□□□ -0.52
NCAPD3-213	ENST00000534532		K7EP34	96 aa		11.82	□□□□□ -0.52
NCAPD3-213	ENST00000534532	UFSP1	Q6NVU6	142 aa		11.82	□□□□□ -0.52
NCAPD3-213	ENST00000534532	PRRC2A	P48634	2157 aa	Known RBP	11.81	□□□□□ -0.52
NCAPD3-213	ENST00000534532	NCOA6	Q14686	2063 aa	Predicted RBP	11.81	□□□□□ -0.52
NCAPD3-213	ENST00000534532	NFE4	Q86UQ8	179 aa		11.81	□□□□□ -0.52
NCAPD3-213	ENST00000534532	MED12L	Q86YW9	2145 aa		11.81	□□□□□ -0.52
NCAPD3-213	ENST00000534532	ZFAND2A	Q8N6M9	145 aa		11.81	□□□□□ -0.52
NCAPD3-213	ENST00000534532	IGHV4-28	A0A0C4DH34	117 aa		11.81	□□□□□ -0.52
NCAPD3-213	ENST00000534532	C19orf71	A6NCJ1	209 aa		11.81	□□□□□ -0.52
NCAPD3-213	ENST00000534532	C11orf86	A6NJI1	115 aa		11.81	□□□□□ -0.52
NCAPD3-213	ENST00000534532	NDUFA7	O95182	113 aa		11.8	□□□□□ -0.52
NCAPD3-213	ENST00000534532	DOPEY1	Q5JWR5	2465 aa		11.8	□□□□□ -0.52
NCAPD3-213	ENST00000534532	KIR2DL5B	A0A0G2JN68	375 aa		11.8	□□□□□ -0.52
NCAPD3-213	ENST00000534532	KIR2DL5B	A0A0G2JPC4	375 aa		11.8	□□□□□ -0.52
NCAPD3-213	ENST00000534532	BRWD1-AS2	P59051	145 aa		11.8	□□□□□ -0.52
NCAPD3-213	ENST00000534532	KIR2DL5A	Q8N109	375 aa		11.8	□□□□□ -0.52
NCAPD3-213	ENST00000534532	MIR7-3HG	Q8N6C7	128 aa		11.8	□□□□□ -0.52
NCAPD3-213	ENST00000534532	KIR2DL5B	Q8NHK3	375 aa		11.8	□□□□□ -0.52
NCAPD3-213	ENST00000534532	IGHV1-58	A0A0C4DH39	117 aa		11.8	□□□□□ -0.52
NCAPD3-213	ENST00000534532		A4D1N5	150 aa		11.8	□□□□□ -0.52
NCAPD3-213	ENST00000534532		H7C423	109 aa		11.8	□□□□□ -0.52
NCAPD3-213	ENST00000534532	NTN5	Q8WTR8	489 aa	Predicted RBP	11.8	□□□□□ -0.52
NCAPD3-213	ENST00000534532	ZFAND3	Q9H8U3	227 aa		11.8	□□□□□ -0.52
NCAPD3-213	ENST00000534532		H3BMG7	143 aa		11.79	□□□□□ -0.52
NCAPD3-213	ENST00000534532	C1orf229	Q6ZS94	237 aa	Predicted RBP	11.79	□□□□□ -0.52
NCAPD3-213	ENST00000534532	DAND5	Q8N907	189 aa		11.79	□□□□□ -0.52
NCAPD3-213	ENST00000534532	ZNF80	P51504	273 aa	Predicted RBP	11.79	□□□□□ -0.52

Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms