RNA–Protein interactions for RNA: ENST00000533089.5

TGFBR3-210, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 6,455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-210ENST00000533089 A8MZ25 164 aa5.38□□□□□ -1.55
TGFBR3-210ENST00000533089 K7EM74 188 aa5.38□□□□□ -1.55
TGFBR3-210ENST00000533089 DOCK7Q96N67 2140 aa5.38□□□□□ -1.55
TGFBR3-210ENST00000533089 PLXNA2O75051 1894 aa5.38□□□□□ -1.55
TGFBR3-210ENST00000533089 KMT2EQ8IZD2 1858 aa5.38□□□□□ -1.55
TGFBR3-210ENST00000533089 TRBV7-6A0A0J9YX20 115 aa5.38□□□□□ -1.55
TGFBR3-210ENST00000533089 PLA2G1BP04054 148 aaKnown RBP5.38□□□□□ -1.55
TGFBR3-210ENST00000533089 C9orf66Q5T8R8 295 aa5.38□□□□□ -1.55
TGFBR3-210ENST00000533089 GDF5OSQ5U4N7 250 aa5.38□□□□□ -1.55
TGFBR3-210ENST00000533089 FAM215AQ9Y5M1 114 aa5.38□□□□□ -1.55
TGFBR3-210ENST00000533089 MIFP14174 115 aa5.38□□□□□ -1.55
TGFBR3-210ENST00000533089 TIRAPP58753 221 aa5.38□□□□□ -1.55
TGFBR3-210ENST00000533089 ZNF833PQ6ZTB9 187 aa5.38□□□□□ -1.55
TGFBR3-210ENST00000533089 XCL1P47992 114 aa5.38□□□□□ -1.55
TGFBR3-210ENST00000533089 C5orf38Q86SI9 138 aa5.38□□□□□ -1.55
TGFBR3-210ENST00000533089 C11orf86A6NJI1 115 aa5.37□□□□□ -1.55
TGFBR3-210ENST00000533089 TPSG1Q9NRR2 321 aa5.37□□□□□ -1.55
TGFBR3-210ENST00000533089 GTF3C1Q12789 2109 aa5.37□□□□□ -1.55
TGFBR3-210ENST00000533089 HELZP42694 1942 aaKnown RBP5.37□□□□□ -1.55
TGFBR3-210ENST00000533089 IGHV7-4-1A0A0J9YVY3 117 aa5.37□□□□□ -1.55
TGFBR3-210ENST00000533089 IGHV4-30-4P0DP06 118 aa5.37□□□□□ -1.55
TGFBR3-210ENST00000533089 IGHV4-31P0DP07 118 aa5.37□□□□□ -1.55
TGFBR3-210ENST00000533089 GRNP28799 593 aaKnown RBP5.37□□□□□ -1.55
TGFBR3-210ENST00000533089 SND1-IT1Q9HBX3 110 aa5.37□□□□□ -1.55
TGFBR3-210ENST00000533089 BDP1A6H8Y1 2624 aa5.37□□□□□ -1.55
TGFBR3-210ENST00000533089 A0A087WVE0 104 aa5.37□□□□□ -1.55
TGFBR3-210ENST00000533089 HOXB4P17483 251 aaPredicted RBP5.37□□□□□ -1.55
TGFBR3-210ENST00000533089 M0R2N4 97 aa5.37□□□□□ -1.55
TGFBR3-210ENST00000533089 NCR3O14931 201 aa5.37□□□□□ -1.55
TGFBR3-210ENST00000533089 ZNF22P17026 224 aaPredicted RBP5.37□□□□□ -1.55
TGFBR3-210ENST00000533089 MYCNOSP40205 109 aa5.37□□□□□ -1.55
TGFBR3-210ENST00000533089 RPL39LQ96EH5 51 aaKnown RBP5.37□□□□□ -1.55
TGFBR3-210ENST00000533089 CADP27708 2225 aa5.37□□□□□ -1.55
TGFBR3-210ENST00000533089 NDUFA4L2Q9NRX3 87 aa5.37□□□□□ -1.55
TGFBR3-210ENST00000533089 KIAA1549Q9HCM3 1950 aa5.36□□□□□ -1.55
TGFBR3-210ENST00000533089 IGLV3-9A0A075B6K5 115 aa5.36□□□□□ -1.55
TGFBR3-210ENST00000533089 GP9P14770 177 aa5.36□□□□□ -1.55
TGFBR3-210ENST00000533089 C17orf58Q2M2W7 97 aa5.36□□□□□ -1.55
TGFBR3-210ENST00000533089 APRG1Q8IVJ8 170 aa5.36□□□□□ -1.55
TGFBR3-210ENST00000533089 A0A0J9YXV3 536 aa5.36□□□□□ -1.55
TGFBR3-210ENST00000533089 MRPL53Q96EL3 112 aaKnown RBP5.36□□□□□ -1.55
TGFBR3-210ENST00000533089 MSRB1Q9NZV6 116 aa5.36□□□□□ -1.55
TGFBR3-210ENST00000533089 TOMM6Q96B49 74 aa5.36□□□□□ -1.55
TGFBR3-210ENST00000533089 SPTBN1Q01082 2364 aaKnown RBP5.36□□□□□ -1.55
TGFBR3-210ENST00000533089 TRBV30A0A0K0K1B3 111 aa5.36□□□□□ -1.55
TGFBR3-210ENST00000533089 ZNF134P52741 427 aa5.36□□□□□ -1.55
TGFBR3-210ENST00000533089 SLURP1P55000 103 aa5.36□□□□□ -1.55
TGFBR3-210ENST00000533089 CCL18P55774 89 aa5.36□□□□□ -1.55
TGFBR3-210ENST00000533089 COL4A3Q01955 1670 aa5.36□□□□□ -1.55
TGFBR3-210ENST00000533089 TNRC6BQ9UPQ9 1833 aaKnown RBP5.36□□□□□ -1.55
TGFBR3-210ENST00000533089 ARHGAP21Q5T5U3 1957 aa5.36□□□□□ -1.55
TGFBR3-210ENST00000533089 H0Y9J4 135 aa5.36□□□□□ -1.55
TGFBR3-210ENST00000533089 WDR86Q86TI4 376 aa5.36□□□□□ -1.55
TGFBR3-210ENST00000533089 TMEM14BQ9NUH8 114 aa5.36□□□□□ -1.55
TGFBR3-210ENST00000533089 H7C423 109 aa5.35□□□□□ -1.55
TGFBR3-210ENST00000533089 TMEM256-PLSCR3K7ERE1 68 aa5.35□□□□□ -1.55
TGFBR3-210ENST00000533089 PRR20EP86478 221 aa5.35□□□□□ -1.55
TGFBR3-210ENST00000533089 PRR20CP86479 221 aa5.35□□□□□ -1.55
TGFBR3-210ENST00000533089 PRR20DP86480 221 aa5.35□□□□□ -1.55
TGFBR3-210ENST00000533089 PRR20BP86481 221 aa5.35□□□□□ -1.55
TGFBR3-210ENST00000533089 PRR20AP86496 221 aa5.35□□□□□ -1.55
TGFBR3-210ENST00000533089 C9orf47Q6ZRZ4 202 aa5.35□□□□□ -1.55
TGFBR3-210ENST00000533089 CD164Q04900 197 aa5.35□□□□□ -1.55
TGFBR3-210ENST00000533089 Q6JHZ5 121 aa5.35□□□□□ -1.55
TGFBR3-210ENST00000533089 C1orf147Q96MC9 270 aaPredicted RBP5.35□□□□□ -1.55
TGFBR3-210ENST00000533089 IGHV4-30-2A0A087WSY4 118 aa5.35□□□□□ -1.55
TGFBR3-210ENST00000533089 NPBQ8NG41 125 aa5.35□□□□□ -1.55
TGFBR3-210ENST00000533089 H3BRN7 92 aa5.34□□□□□ -1.55
TGFBR3-210ENST00000533089 IGKV4-1P06312 121 aa5.34□□□□□ -1.55
TGFBR3-210ENST00000533089 SEM1Q6ZVN7 128 aa5.34□□□□□ -1.55
TGFBR3-210ENST00000533089 OPRPNQ99935 248 aaPredicted RBP5.34□□□□□ -1.55
TGFBR3-210ENST00000533089 PHF3Q92576 2039 aaKnown RBP5.34□□□□□ -1.55
TGFBR3-210ENST00000533089 C2orf16Q68DN1 1984 aa5.34□□□□□ -1.55
TGFBR3-210ENST00000533089 TRAV7A0A075B6U4 112 aa5.34□□□□□ -1.55
TGFBR3-210ENST00000533089 ZNF503-AS2A6NEH8 195 aa5.34□□□□□ -1.55
TGFBR3-210ENST00000533089 IGHV4-38-2P0DP08 117 aa5.34□□□□□ -1.55
TGFBR3-210ENST00000533089 RPL39P62891 51 aaKnown RBP5.34□□□□□ -1.55
TGFBR3-210ENST00000533089 MDFIQ99750 246 aa5.34□□□□□ -1.55
TGFBR3-210ENST00000533089 TMEM223A0PJW6 202 aa5.34□□□□□ -1.55
TGFBR3-210ENST00000533089 DOCK10Q96BY6 2186 aa5.34□□□□□ -1.56
TGFBR3-210ENST00000533089 A0A1B0GXF2 115 aa5.34□□□□□ -1.56
TGFBR3-210ENST00000533089 MIAQ16674 131 aa5.34□□□□□ -1.56
TGFBR3-210ENST00000533089 IGHV4-61A0A0C4DH41 118 aa5.33□□□□□ -1.56
TGFBR3-210ENST00000533089 RETNLBQ9BQ08 111 aa5.33□□□□□ -1.56
TGFBR3-210ENST00000533089 LINC00310P59036 64 aa5.33□□□□□ -1.56
TGFBR3-210ENST00000533089 EBI3Q14213 229 aa5.33□□□□□ -1.56
TGFBR3-210ENST00000533089 CASC2Q6XLA1 102 aa5.33□□□□□ -1.56
TGFBR3-210ENST00000533089 C17orf77Q96MU5 243 aa5.33□□□□□ -1.56
TGFBR3-210ENST00000533089 OTOGLQ3ZCN5 2332 aa5.33□□□□□ -1.56
TGFBR3-210ENST00000533089 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.33□□□□□ -1.56
TGFBR3-210ENST00000533089 IGKV2-29A2NJV5 120 aaPredicted RBP5.33□□□□□ -1.56
TGFBR3-210ENST00000533089 CRIP2P52943 208 aaPredicted RBP5.33□□□□□ -1.56
TGFBR3-210ENST00000533089 HIGD2BQ4VC39 106 aa5.33□□□□□ -1.56
TGFBR3-210ENST00000533089 FAM19A3Q7Z5A8 133 aa5.33□□□□□ -1.56
TGFBR3-210ENST00000533089 TMEM14CQ9P0S9 112 aa5.33□□□□□ -1.56
TGFBR3-210ENST00000533089 SLPIP03973 132 aa5.33□□□□□ -1.56
TGFBR3-210ENST00000533089 X6R8D5 127 aa5.33□□□□□ -1.56
TGFBR3-210ENST00000533089 SPART-AS1P0CW21 52 aa5.33□□□□□ -1.56
TGFBR3-210ENST00000533089 GYPEP15421 78 aa5.33□□□□□ -1.56
TGFBR3-210ENST00000533089 ETDCA0A1B0GVM5 59 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms