RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 CCL16O15467 120 aa3.47□□□□□ -1.85
ECHDC1-222ENST00000531967 FXYD2P54710 66 aa3.47□□□□□ -1.85
ECHDC1-222ENST00000531967 ZNF56Q15929 161 aa3.47□□□□□ -1.85
ECHDC1-222ENST00000531967 MUC7Q8TAX7 377 aa3.47□□□□□ -1.85
ECHDC1-222ENST00000531967 CYSTM1Q9H1C7 97 aa3.47□□□□□ -1.85
ECHDC1-222ENST00000531967 MYO9BQ13459 2157 aa3.47□□□□□ -1.85
ECHDC1-222ENST00000531967 SNRNP200O75643 2136 aaKnown RBP3.47□□□□□ -1.85
ECHDC1-222ENST00000531967 NDUFAF8A1L188 74 aa3.47□□□□□ -1.85
ECHDC1-222ENST00000531967 LHBP01229 141 aa3.47□□□□□ -1.85
ECHDC1-222ENST00000531967 GCHFRP30047 84 aa3.47□□□□□ -1.85
ECHDC1-222ENST00000531967 ATP5EP56381 51 aaPredicted RBP3.47□□□□□ -1.85
ECHDC1-222ENST00000531967 RPL36AP83881 106 aaKnown RBP3.47□□□□□ -1.85
ECHDC1-222ENST00000531967 LINC01600Q96MT4 127 aa3.47□□□□□ -1.85
ECHDC1-222ENST00000531967 KRTAP4-8Q9BYQ9 185 aa3.47□□□□□ -1.85
ECHDC1-222ENST00000531967 PCSK5Q92824 1860 aa3.46□□□□□ -1.86
ECHDC1-222ENST00000531967 CRYM-AS1A6NIL9 109 aa3.46□□□□□ -1.86
ECHDC1-222ENST00000531967 ACYP1P07311 99 aa3.46□□□□□ -1.86
ECHDC1-222ENST00000531967 TMEM170BQ5T4T1 132 aa3.46□□□□□ -1.86
ECHDC1-222ENST00000531967 TYMSOSQ8TAI1 123 aa3.46□□□□□ -1.86
ECHDC1-222ENST00000531967 TRGV9Q99603 122 aa3.46□□□□□ -1.86
ECHDC1-222ENST00000531967 PTPRSQ13332 1948 aa3.46□□□□□ -1.86
ECHDC1-222ENST00000531967 THADAQ6YHU6 1953 aa3.46□□□□□ -1.86
ECHDC1-222ENST00000531967 IGKV1D-37A0A075B6S9 117 aa3.46□□□□□ -1.86
ECHDC1-222ENST00000531967 CEBPZOSA8MTT3 80 aa3.46□□□□□ -1.86
ECHDC1-222ENST00000531967 TMEM14DPA8MWL7 114 aa3.46□□□□□ -1.86
ECHDC1-222ENST00000531967 IL4P05112 153 aa3.46□□□□□ -1.86
ECHDC1-222ENST00000531967 CD24P25063 80 aa3.46□□□□□ -1.86
ECHDC1-222ENST00000531967 LYZL2Q7Z4W2 148 aa3.46□□□□□ -1.86
ECHDC1-222ENST00000531967 C5orf38Q86SI9 138 aa3.46□□□□□ -1.86
ECHDC1-222ENST00000531967 DYNAPQ8N1N2 210 aa3.46□□□□□ -1.86
ECHDC1-222ENST00000531967 LTBP2Q14767 1821 aa3.46□□□□□ -1.86
ECHDC1-222ENST00000531967 KIAA1549Q9HCM3 1950 aa3.46□□□□□ -1.86
ECHDC1-222ENST00000531967 MYOFQ9NZM1 2061 aa3.45□□□□□ -1.86
ECHDC1-222ENST00000531967 KIAA2026Q5HYC2 2103 aa3.45□□□□□ -1.86
ECHDC1-222ENST00000531967 C17orf98A8MV24 154 aa3.45□□□□□ -1.86
ECHDC1-222ENST00000531967 LEPROTL1O95214 131 aa3.45□□□□□ -1.86
ECHDC1-222ENST00000531967 ASB16-AS1Q495Z4 193 aa3.45□□□□□ -1.86
ECHDC1-222ENST00000531967 TTTY10Q9BZA0 68 aa3.45□□□□□ -1.86
ECHDC1-222ENST00000531967 MPDZO75970 2070 aa3.45□□□□□ -1.86
ECHDC1-222ENST00000531967 HTTP42858 3142 aa3.45□□□□□ -1.86
ECHDC1-222ENST00000531967 SLC48A1Q6P1K1 146 aa3.45□□□□□ -1.86
ECHDC1-222ENST00000531967 LINC00643Q86TS7 51 aa3.45□□□□□ -1.86
ECHDC1-222ENST00000531967 TCF20Q9UGU0 1960 aaKnown RBP3.44□□□□□ -1.86
ECHDC1-222ENST00000531967 TCRBV4S1A1TA0A5B7 111 aa3.44□□□□□ -1.86
ECHDC1-222ENST00000531967 FAM168BA1KXE4 195 aa3.44□□□□□ -1.86
ECHDC1-222ENST00000531967 E7EQL1 145 aa3.44□□□□□ -1.86
ECHDC1-222ENST00000531967 GNRH2O43555 120 aa3.44□□□□□ -1.86
ECHDC1-222ENST00000531967 Q8N8P6 123 aa3.44□□□□□ -1.86
ECHDC1-222ENST00000531967 SPANXA2-OT1Q8N9U9 137 aa3.44□□□□□ -1.86
ECHDC1-222ENST00000531967 SPTSSAQ969W0 71 aa3.44□□□□□ -1.86
ECHDC1-222ENST00000531967 NACAE9PAV3 2078 aa3.44□□□□□ -1.86
ECHDC1-222ENST00000531967 PIGBOS1A0A0B4J2F0 54 aa3.44□□□□□ -1.86
ECHDC1-222ENST00000531967 Q8IYB0 196 aa3.44□□□□□ -1.86
ECHDC1-222ENST00000531967 LINC00467Q9BRT7 94 aa3.44□□□□□ -1.86
ECHDC1-222ENST00000531967 CCL26Q9Y258 94 aa3.44□□□□□ -1.86
ECHDC1-222ENST00000531967 COL5A1P20908 1838 aaPredicted RBP3.44□□□□□ -1.86
ECHDC1-222ENST00000531967 TMSB15BA0A087X1C1 80 aa3.43□□□□□ -1.86
ECHDC1-222ENST00000531967 KRTAP4-8A0A0G2JLE6 195 aa3.43□□□□□ -1.86
ECHDC1-222ENST00000531967 A0A1B0GWA3 101 aa3.43□□□□□ -1.86
ECHDC1-222ENST00000531967 H3BVH4 76 aa3.43□□□□□ -1.86
ECHDC1-222ENST00000531967 LINC01565O15544 149 aa3.43□□□□□ -1.86
ECHDC1-222ENST00000531967 RNASE2P10153 161 aaKnown RBP3.43□□□□□ -1.86
ECHDC1-222ENST00000531967 DEFA4P12838 97 aa3.43□□□□□ -1.86
ECHDC1-222ENST00000531967 UBE2D3P61077 147 aa3.43□□□□□ -1.86
ECHDC1-222ENST00000531967 UBE2D2P62837 147 aa3.43□□□□□ -1.86
ECHDC1-222ENST00000531967 SERF2P84101 59 aa3.43□□□□□ -1.86
ECHDC1-222ENST00000531967 KRTAP4-7Q9BYR0 210 aa3.43□□□□□ -1.86
ECHDC1-222ENST00000531967 DOCK9Q9BZ29 2069 aa3.43□□□□□ -1.86
ECHDC1-222ENST00000531967 NUMA1Q14980 2115 aa3.43□□□□□ -1.86
ECHDC1-222ENST00000531967 BRCA2P51587 3418 aa3.43□□□□□ -1.86
ECHDC1-222ENST00000531967 IGLV1-51P01701 117 aa3.43□□□□□ -1.86
ECHDC1-222ENST00000531967 HIGD2BQ4VC39 106 aa3.43□□□□□ -1.86
ECHDC1-222ENST00000531967 COX14Q96I36 57 aa3.43□□□□□ -1.86
ECHDC1-222ENST00000531967 R4GMQ9 66 aa3.43□□□□□ -1.86
ECHDC1-222ENST00000531967 MUC22E2RYF6 1773 aaPredicted RBP3.42□□□□□ -1.86
ECHDC1-222ENST00000531967 IGLV3-12A0A075B6K2 115 aa3.42□□□□□ -1.86
ECHDC1-222ENST00000531967 MYMXA0A1B0GTQ4 84 aa3.42□□□□□ -1.86
ECHDC1-222ENST00000531967 CCKP06307 115 aa3.42□□□□□ -1.86
ECHDC1-222ENST00000531967 DNAH10OSP0CZ25 163 aa3.42□□□□□ -1.86
ECHDC1-222ENST00000531967 Q8N814 137 aa3.42□□□□□ -1.86
ECHDC1-222ENST00000531967 TIMM9Q9Y5J7 89 aa3.42□□□□□ -1.86
ECHDC1-222ENST00000531967 LY96Q9Y6Y9 160 aa3.42□□□□□ -1.86
ECHDC1-222ENST00000531967 ADAMTS9Q9P2N4 1935 aa3.42□□□□□ -1.86
ECHDC1-222ENST00000531967 ARID1BQ8NFD5 2236 aaPredicted RBP3.42□□□□□ -1.86
ECHDC1-222ENST00000531967 TRAV7A0A075B6U4 112 aa3.42□□□□□ -1.86
ECHDC1-222ENST00000531967 B4DSR2 109 aa3.42□□□□□ -1.86
ECHDC1-222ENST00000531967 CISD3P0C7P0 127 aa3.42□□□□□ -1.86
ECHDC1-222ENST00000531967 RBM3P98179 157 aaKnown RBP3.42□□□□□ -1.86
ECHDC1-222ENST00000531967 KRTAP15-1Q3LI76 137 aa3.42□□□□□ -1.86
ECHDC1-222ENST00000531967 LYZL1Q6UWQ5 148 aa3.42□□□□□ -1.86
ECHDC1-222ENST00000531967 RPRMLQ8N4K4 120 aa3.42□□□□□ -1.86
ECHDC1-222ENST00000531967 TXNDC17Q9BRA2 123 aa3.42□□□□□ -1.86
ECHDC1-222ENST00000531967 H3BQ85 93 aa3.41□□□□□ -1.86
ECHDC1-222ENST00000531967 ZNF22P17026 224 aaPredicted RBP3.41□□□□□ -1.86
ECHDC1-222ENST00000531967 ESRGQ1W209 222 aa3.41□□□□□ -1.86
ECHDC1-222ENST00000531967 DEFB121Q5J5C9 76 aa3.41□□□□□ -1.86
ECHDC1-222ENST00000531967 IMMP1LQ96LU5 166 aa3.41□□□□□ -1.86
ECHDC1-222ENST00000531967 RNF5Q99942 180 aa3.41□□□□□ -1.86
ECHDC1-222ENST00000531967 SLC50A1Q9BRV3 221 aa3.41□□□□□ -1.86
ECHDC1-222ENST00000531967 LINC00474Q9P2X8 69 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms