RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 A0A1B0GXF2 115 aa11.3□□□□□ -0.6
USP47-207ENST00000527733 NPC2P61916 151 aa11.3□□□□□ -0.6
USP47-207ENST00000527733 HERVK_113P63121 156 aa11.3□□□□□ -0.6
USP47-207ENST00000527733 ZFP2Q6ZN57 461 aa11.3□□□□□ -0.6
USP47-207ENST00000527733 TRBV7-3A0A075B6L6 115 aa11.29□□□□□ -0.6
USP47-207ENST00000527733 ERG28Q9UKR5 140 aa11.29□□□□□ -0.6
USP47-207ENST00000527733 DEFB4AO15263 64 aa11.29□□□□□ -0.6
USP47-207ENST00000527733 IGLL1P15814 213 aa11.29□□□□□ -0.6
USP47-207ENST00000527733 RNASE13Q5GAN3 156 aaKnown RBP11.29□□□□□ -0.6
USP47-207ENST00000527733 ZNF625Q96I27 306 aaPredicted RBP11.29□□□□□ -0.6
USP47-207ENST00000527733 JPT2Q9H910 190 aa11.29□□□□□ -0.6
USP47-207ENST00000527733 HHLA3Q9XRX5 114 aa11.29□□□□□ -0.6
USP47-207ENST00000527733 ICOSQ9Y6W8 199 aa11.29□□□□□ -0.6
USP47-207ENST00000527733 ZNF561-AS1K7EIQ3 104 aa11.28□□□□□ -0.6
USP47-207ENST00000527733 S100A7L2Q5SY68 101 aa11.28□□□□□ -0.6
USP47-207ENST00000527733 DKK2Q9UBU2 259 aa11.28□□□□□ -0.6
USP47-207ENST00000527733 WDFY4Q6ZS81 3184 aa11.28□□□□□ -0.6
USP47-207ENST00000527733 ZNF479Q96JC4 524 aa11.28□□□□□ -0.6
USP47-207ENST00000527733 NUPR1O60356 82 aa11.28□□□□□ -0.6
USP47-207ENST00000527733 IGLV2-11P01706 119 aa11.28□□□□□ -0.6
USP47-207ENST00000527733 ZNF124Q15973 351 aa11.28□□□□□ -0.6
USP47-207ENST00000527733 GDF5OSQ5U4N7 250 aa11.28□□□□□ -0.6
USP47-207ENST00000527733 HECTD1Q9ULT8 2610 aa11.28□□□□□ -0.6
USP47-207ENST00000527733 CRIP1P50238 77 aa11.27□□□□□ -0.6
USP47-207ENST00000527733 ESM1Q9NQ30 184 aa11.27□□□□□ -0.6
USP47-207ENST00000527733 TP53TG3Q9ULZ0 132 aa11.27□□□□□ -0.6
USP47-207ENST00000527733 IGLC3P0DOY3 106 aa11.27□□□□□ -0.61
USP47-207ENST00000527733 SLC25A20O43772 301 aa11.26□□□□□ -0.61
USP47-207ENST00000527733 RMI2Q96E14 147 aa11.26□□□□□ -0.61
USP47-207ENST00000527733 F8W735 103 aaPredicted RBP11.26□□□□□ -0.61
USP47-207ENST00000527733 NDUFA12Q9UI09 145 aa11.26□□□□□ -0.61
USP47-207ENST00000527733 SMIM9A6NGZ8 99 aa11.26□□□□□ -0.61
USP47-207ENST00000527733 DCANP1Q8TF63 244 aa11.26□□□□□ -0.61
USP47-207ENST00000527733 TRBV10-1A0A0K0K1A3 114 aa11.25□□□□□ -0.61
USP47-207ENST00000527733 GATD1Q8NB37 220 aa11.25□□□□□ -0.61
USP47-207ENST00000527733 SPEGQ15772 3267 aa11.25□□□□□ -0.61
USP47-207ENST00000527733 TRAV4A0A0B4J268 109 aa11.25□□□□□ -0.61
USP47-207ENST00000527733 KIR3DS1Q14943 382 aa11.25□□□□□ -0.61
USP47-207ENST00000527733 MRGPRG-AS1Q2M3A8 158 aa11.25□□□□□ -0.61
USP47-207ENST00000527733 Q6ZQT7 251 aa11.25□□□□□ -0.61
USP47-207ENST00000527733 CBY1Q9Y3M2 126 aa11.25□□□□□ -0.61
USP47-207ENST00000527733 LEPROTO15243 131 aa11.25□□□□□ -0.61
USP47-207ENST00000527733 GHRHP01286 108 aa11.25□□□□□ -0.61
USP47-207ENST00000527733 CLPSL2Q6UWE3 100 aa11.25□□□□□ -0.61
USP47-207ENST00000527733 PRO0255Q9UI72 69 aa11.25□□□□□ -0.61
USP47-207ENST00000527733 A0A1B0GWB2 263 aa11.25□□□□□ -0.61
USP47-207ENST00000527733 COX8AP10176 69 aa11.24□□□□□ -0.61
USP47-207ENST00000527733 CFAP54Q96N23 3096 aa11.24□□□□□ -0.61
USP47-207ENST00000527733 Q6ZTI0 123 aa11.24□□□□□ -0.61
USP47-207ENST00000527733 J3QQQ9 107 aa11.24□□□□□ -0.61
USP47-207ENST00000527733 MRPS12O15235 138 aaKnown RBP11.23□□□□□ -0.61
USP47-207ENST00000527733 SAMD5Q5TGI4 173 aa11.23□□□□□ -0.61
USP47-207ENST00000527733 LINC00482Q8N8I6 264 aa11.23□□□□□ -0.61
USP47-207ENST00000527733 CCL18P55774 89 aa11.22□□□□□ -0.61
USP47-207ENST00000527733 LINC00173Q6ZV60 143 aa11.22□□□□□ -0.61
USP47-207ENST00000527733 UBE2WQ96B02 151 aa11.22□□□□□ -0.61
USP47-207ENST00000527733 C16orf95Q9H693 158 aa11.22□□□□□ -0.61
USP47-207ENST00000527733 XCL1P47992 114 aa11.22□□□□□ -0.61
USP47-207ENST00000527733 MRPL52Q86TS9 123 aaKnown RBP11.22□□□□□ -0.61
USP47-207ENST00000527733 PFN2P35080 140 aa11.22□□□□□ -0.61
USP47-207ENST00000527733 SPINK8P0C7L1 97 aa11.21□□□□□ -0.61
USP47-207ENST00000527733 RPL39P62891 51 aaKnown RBP11.21□□□□□ -0.61
USP47-207ENST00000527733 FGF6P10767 208 aa11.21□□□□□ -0.62
USP47-207ENST00000527733 KLLNB2CW77 178 aa11.21□□□□□ -0.62
USP47-207ENST00000527733 AMTNQ6UX39 209 aa11.21□□□□□ -0.62
USP47-207ENST00000527733 CST9LQ9H4G1 147 aa11.2□□□□□ -0.62
USP47-207ENST00000527733 COL6A3P12111 3177 aa11.2□□□□□ -0.62
USP47-207ENST00000527733 FAM222AQ5U5X8 452 aa11.2□□□□□ -0.62
USP47-207ENST00000527733 TIMM17AQ99595 171 aa11.2□□□□□ -0.62
USP47-207ENST00000527733 A0A0J9YXV3 536 aa11.19□□□□□ -0.62
USP47-207ENST00000527733 LYRM9A8MSI8 78 aa11.19□□□□□ -0.62
USP47-207ENST00000527733 LINC01545Q5VT33 79 aa11.19□□□□□ -0.62
USP47-207ENST00000527733 NAA38Q9BRA0 125 aaKnown RBP11.19□□□□□ -0.62
USP47-207ENST00000527733 IGKV2D-24A0A075B6R9 120 aa11.19□□□□□ -0.62
USP47-207ENST00000527733 F8P00451 2351 aa11.19□□□□□ -0.62
USP47-207ENST00000527733 C20orf203Q8NBC4 194 aa11.19□□□□□ -0.62
USP47-207ENST00000527733 TOMM6Q96B49 74 aa11.18□□□□□ -0.62
USP47-207ENST00000527733 C1orf43Q9BWL3 253 aa11.18□□□□□ -0.62
USP47-207ENST00000527733 PRR9Q5T870 116 aa11.18□□□□□ -0.62
USP47-207ENST00000527733 EDN2P20800 178 aa11.17□□□□□ -0.62
USP47-207ENST00000527733 C5orf38Q86SI9 138 aa11.17□□□□□ -0.62
USP47-207ENST00000527733 WFDC10AQ9H1F0 79 aa11.17□□□□□ -0.62
USP47-207ENST00000527733 PGPEP1Q9NXJ5 209 aa11.17□□□□□ -0.62
USP47-207ENST00000527733 MAJINQ3KP22 176 aa11.17□□□□□ -0.62
USP47-207ENST00000527733 Q9HAA7 133 aa11.17□□□□□ -0.62
USP47-207ENST00000527733 C11orf21Q9P2W6 132 aa11.17□□□□□ -0.62
USP47-207ENST00000527733 REV3LO60673 3130 aa11.17□□□□□ -0.62
USP47-207ENST00000527733 MIFP14174 115 aa11.16□□□□□ -0.62
USP47-207ENST00000527733 C11orf45Q8TAV5 145 aa11.16□□□□□ -0.62
USP47-207ENST00000527733 VSIG2Q96IQ7 327 aa11.16□□□□□ -0.62
USP47-207ENST00000527733 TRAV12-1A0A0B4J245 112 aa11.16□□□□□ -0.62
USP47-207ENST00000527733 NXPH4O95158 308 aa11.16□□□□□ -0.62
USP47-207ENST00000527733 ODF3L2Q3SX64 289 aa11.16□□□□□ -0.62
USP47-207ENST00000527733 TDRG1Q3Y452 100 aa11.16□□□□□ -0.62
USP47-207ENST00000527733 CELSR3Q9NYQ7 3312 aa11.15□□□□□ -0.62
USP47-207ENST00000527733 P0DMU3 169 aa11.15□□□□□ -0.62
USP47-207ENST00000527733 FAM231AP0DMU4 169 aa11.15□□□□□ -0.62
USP47-207ENST00000527733 FAM231CP0DMU5 169 aa11.15□□□□□ -0.62
USP47-207ENST00000527733 SLC25A29Q8N8R3 303 aa11.15□□□□□ -0.62
USP47-207ENST00000527733 IGLV1-51P01701 117 aa11.15□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms