RNA–Protein interactions for RNA: ENST00000525633.1

ATPAF1-207, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 4

Gene ATPAF1, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-207ENST00000525633 MRAP2Q96G30 205 aa4.48□□□□□ -1.69
ATPAF1-207ENST00000525633 PRELID3AQ96N28 172 aa4.48□□□□□ -1.69
ATPAF1-207ENST00000525633 C18orf15Q96N68 181 aa4.48□□□□□ -1.69
ATPAF1-207ENST00000525633 HHLA3Q9XRX5 114 aa4.48□□□□□ -1.69
ATPAF1-207ENST00000525633 TRAV26-1A0A087WT03 109 aa4.47□□□□□ -1.69
ATPAF1-207ENST00000525633 TRAV10A0A0B4J240 114 aa4.47□□□□□ -1.69
ATPAF1-207ENST00000525633 LOC100131303A0A0U1RQF7 123 aa4.47□□□□□ -1.69
ATPAF1-207ENST00000525633 H7C1H1 209 aa4.47□□□□□ -1.69
ATPAF1-207ENST00000525633 K7EQD1 137 aa4.47□□□□□ -1.69
ATPAF1-207ENST00000525633 M0QY20 66 aa4.47□□□□□ -1.69
ATPAF1-207ENST00000525633 PAX4O43316 350 aa4.47□□□□□ -1.69
ATPAF1-207ENST00000525633 NPYP01303 97 aa4.47□□□□□ -1.69
ATPAF1-207ENST00000525633 SRIP30626 198 aa4.47□□□□□ -1.69
ATPAF1-207ENST00000525633 CRYBA4P53673 196 aa4.47□□□□□ -1.69
ATPAF1-207ENST00000525633 ORMDL3Q8N138 153 aa4.47□□□□□ -1.69
ATPAF1-207ENST00000525633 SLC25A29Q8N8R3 303 aa4.47□□□□□ -1.69
ATPAF1-207ENST00000525633 PRADC1Q9BSG0 188 aa4.47□□□□□ -1.69
ATPAF1-207ENST00000525633 ST20Q9HBF5 79 aa4.47□□□□□ -1.69
ATPAF1-207ENST00000525633 Q9UF83 564 aa4.47□□□□□ -1.69
ATPAF1-207ENST00000525633 PRO0255Q9UI72 69 aa4.47□□□□□ -1.69
ATPAF1-207ENST00000525633 TNFRSF18Q9Y5U5 241 aa4.47□□□□□ -1.69
ATPAF1-207ENST00000525633 LOC389332A0A1B0GUA5 103 aa4.46□□□□□ -1.7
ATPAF1-207ENST00000525633 TRBV6-4A0A1B0GX49 114 aa4.46□□□□□ -1.7
ATPAF1-207ENST00000525633 GAGE12JA6NER3 117 aa4.46□□□□□ -1.7
ATPAF1-207ENST00000525633 C1orf196B1AJZ1 125 aa4.46□□□□□ -1.7
ATPAF1-207ENST00000525633 TNFRSF6BO95407 300 aa4.46□□□□□ -1.7
ATPAF1-207ENST00000525633 PPBPP02775 128 aa4.46□□□□□ -1.7
ATPAF1-207ENST00000525633 GYPEP15421 78 aa4.46□□□□□ -1.7
ATPAF1-207ENST00000525633 GAGE1Q13065 139 aa4.46□□□□□ -1.7
ATPAF1-207ENST00000525633 GAGE4Q13068 117 aa4.46□□□□□ -1.7
ATPAF1-207ENST00000525633 GAGE5Q13069 117 aa4.46□□□□□ -1.7
ATPAF1-207ENST00000525633 RHOHQ15669 191 aa4.46□□□□□ -1.7
ATPAF1-207ENST00000525633 GAGE13Q4V321 117 aa4.46□□□□□ -1.7
ATPAF1-207ENST00000525633 NRACQ8N912 160 aa4.46□□□□□ -1.7
ATPAF1-207ENST00000525633 NEXN-AS1Q8NBZ9 246 aa4.46□□□□□ -1.7
ATPAF1-207ENST00000525633 ZNRF2Q8NHG8 242 aa4.46□□□□□ -1.7
ATPAF1-207ENST00000525633 PHLDA1Q8WV24 401 aaPredicted RBP4.46□□□□□ -1.7
ATPAF1-207ENST00000525633 VSIG2Q96IQ7 327 aa4.46□□□□□ -1.7
ATPAF1-207ENST00000525633 ALKBH7Q9BT30 221 aaPredicted RBP4.46□□□□□ -1.7
ATPAF1-207ENST00000525633 NIT2Q9NQR4 276 aa4.46□□□□□ -1.7
ATPAF1-207ENST00000525633 A0A096LPF7 62 aa4.45□□□□□ -1.7
ATPAF1-207ENST00000525633 TRBV10-1A0A0K0K1A3 114 aa4.45□□□□□ -1.7
ATPAF1-207ENST00000525633 PHOX2AO14813 284 aa4.45□□□□□ -1.7
ATPAF1-207ENST00000525633 PPP1R17O96001 155 aa4.45□□□□□ -1.7
ATPAF1-207ENST00000525633 RPL36AP83881 106 aaKnown RBP4.45□□□□□ -1.7
ATPAF1-207ENST00000525633 IQCJQ1A5X6 159 aa4.45□□□□□ -1.7
ATPAF1-207ENST00000525633 NEGR1Q7Z3B1 354 aa4.45□□□□□ -1.7
ATPAF1-207ENST00000525633 DEFB104AQ8WTQ1 72 aa4.45□□□□□ -1.7
ATPAF1-207ENST00000525633 RPL36ALQ969Q0 106 aaKnown RBP4.45□□□□□ -1.7
ATPAF1-207ENST00000525633 DNAJC30Q96LL9 226 aa4.45□□□□□ -1.7
ATPAF1-207ENST00000525633 KRTAP3-3Q9BYR6 98 aa4.45□□□□□ -1.7
ATPAF1-207ENST00000525633 KRTAP3-2Q9BYR7 98 aa4.45□□□□□ -1.7
ATPAF1-207ENST00000525633 MAP1LC3AQ9H492 121 aa4.45□□□□□ -1.7
ATPAF1-207ENST00000525633 TRBV7-3A0A075B6L6 115 aa4.44□□□□□ -1.7
ATPAF1-207ENST00000525633 IGHV3-38A0A0C4DH36 116 aa4.44□□□□□ -1.7
ATPAF1-207ENST00000525633 IGLL5B9A064 214 aa4.44□□□□□ -1.7
ATPAF1-207ENST00000525633 NUDT3O95989 172 aa4.44□□□□□ -1.7
ATPAF1-207ENST00000525633 RAB5BP61020 215 aa4.44□□□□□ -1.7
ATPAF1-207ENST00000525633 SUMO2P61956 95 aaKnown RBP4.44□□□□□ -1.7
ATPAF1-207ENST00000525633 BAGE3Q86Y29 109 aa4.44□□□□□ -1.7
ATPAF1-207ENST00000525633 C18orf32Q8TCD1 76 aa4.44□□□□□ -1.7
ATPAF1-207ENST00000525633 LAMTOR2Q9Y2Q5 125 aa4.44□□□□□ -1.7
ATPAF1-207ENST00000525633 TRBV6-5A0A0K0K1A5 114 aa4.43□□□□□ -1.7
ATPAF1-207ENST00000525633 SDHAF1A6NFY7 115 aa4.43□□□□□ -1.7
ATPAF1-207ENST00000525633 VCYO14598 125 aa4.43□□□□□ -1.7
ATPAF1-207ENST00000525633 HIST1H2BKO60814 126 aa4.43□□□□□ -1.7
ATPAF1-207ENST00000525633 HIST1H2BJP06899 126 aa4.43□□□□□ -1.7
ATPAF1-207ENST00000525633 PMCHP20382 165 aa4.43□□□□□ -1.7
ATPAF1-207ENST00000525633 HIST1H2BOP23527 126 aa4.43□□□□□ -1.7
ATPAF1-207ENST00000525633 HIST1H2BBP33778 126 aa4.43□□□□□ -1.7
ATPAF1-207ENST00000525633 IFI27P40305 119 aaPredicted RBP4.43□□□□□ -1.7
ATPAF1-207ENST00000525633 POLR2KP53803 58 aaKnown RBP4.43□□□□□ -1.7
ATPAF1-207ENST00000525633 NDUFA6P56556 154 aa4.43□□□□□ -1.7
ATPAF1-207ENST00000525633 HIST1H2BDP58876 126 aa4.43□□□□□ -1.7
ATPAF1-207ENST00000525633 UBE2D3P61077 147 aa4.43□□□□□ -1.7
ATPAF1-207ENST00000525633 HIST1H2BCP62807 126 aa4.43□□□□□ -1.7
ATPAF1-207ENST00000525633 UBE2D2P62837 147 aa4.43□□□□□ -1.7
ATPAF1-207ENST00000525633 MRPL23Q16540 153 aaKnown RBP4.43□□□□□ -1.7
ATPAF1-207ENST00000525633 HIST2H2BEQ16778 126 aa4.43□□□□□ -1.7
ATPAF1-207ENST00000525633 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.43□□□□□ -1.7
ATPAF1-207ENST00000525633 CEMP1Q6PRD7 247 aaPredicted RBP4.43□□□□□ -1.7
ATPAF1-207ENST00000525633 FA2HQ7L5A8 372 aa4.43□□□□□ -1.7
ATPAF1-207ENST00000525633 NIT1Q86X76 327 aa4.43□□□□□ -1.7
ATPAF1-207ENST00000525633 Q8N8P6 123 aa4.43□□□□□ -1.7
ATPAF1-207ENST00000525633 ATP6V0E2Q8NHE4 81 aa4.43□□□□□ -1.7
ATPAF1-207ENST00000525633 PRSS3P2Q8NHM4 247 aa4.43□□□□□ -1.7
ATPAF1-207ENST00000525633 HIST1H2BHQ93079 126 aa4.43□□□□□ -1.7
ATPAF1-207ENST00000525633 HIST1H2BNQ99877 126 aa4.43□□□□□ -1.7
ATPAF1-207ENST00000525633 HIST1H2BMQ99879 126 aa4.43□□□□□ -1.7
ATPAF1-207ENST00000525633 C20orf78Q9BR46 151 aa4.43□□□□□ -1.7
ATPAF1-207ENST00000525633 TMEM70Q9BUB7 260 aa4.43□□□□□ -1.7
ATPAF1-207ENST00000525633 SMIM2Q9BVW6 85 aa4.43□□□□□ -1.7
ATPAF1-207ENST00000525633 ICOSQ9Y6W8 199 aa4.43□□□□□ -1.7
ATPAF1-207ENST00000525633 ALMS1Q8TCU4 4167 aa4.43□□□□□ -1.7
ATPAF1-207ENST00000525633 CSMD3Q7Z407 3707 aa4.43□□□□□ -1.7
ATPAF1-207ENST00000525633 DNAH10Q8IVF4 4471 aa4.42□□□□□ -1.7
ATPAF1-207ENST00000525633 LYSTQ99698 3801 aa4.42□□□□□ -1.7
ATPAF1-207ENST00000525633 H3BNG1 76 aa4.42□□□□□ -1.7
ATPAF1-207ENST00000525633 I3L3M4 83 aa4.42□□□□□ -1.7
ATPAF1-207ENST00000525633 LINC00694P0DN24 101 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms