RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 HMGN4O00479 90 aa1.54□□□□□ -2.16
HMGB1P1-201ENST00000522557 NDUFB3O43676 98 aa1.54□□□□□ -2.16
HMGB1P1-201ENST00000522557 CSN2P05814 226 aa1.54□□□□□ -2.16
HMGB1P1-201ENST00000522557 RNASE3P12724 160 aaKnown RBP1.54□□□□□ -2.16
HMGB1P1-201ENST00000522557 MIFP14174 115 aa1.54□□□□□ -2.16
HMGB1P1-201ENST00000522557 EIF2B2P49770 351 aaKnown RBP1.54□□□□□ -2.16
HMGB1P1-201ENST00000522557 PIGPP57054 158 aa1.54□□□□□ -2.16
HMGB1P1-201ENST00000522557 ELOBQ15370 118 aa1.54□□□□□ -2.16
HMGB1P1-201ENST00000522557 SCGB2B2Q4G0G5 96 aa1.54□□□□□ -2.16
HMGB1P1-201ENST00000522557 SPRNQ5BIV9 151 aa1.54□□□□□ -2.16
HMGB1P1-201ENST00000522557 OR2T2Q6IF00 324 aa1.54□□□□□ -2.16
HMGB1P1-201ENST00000522557 CLECL1Q8IZS7 167 aa1.54□□□□□ -2.16
HMGB1P1-201ENST00000522557 OR5AS1Q8N127 324 aa1.54□□□□□ -2.16
HMGB1P1-201ENST00000522557 Q8N2B8 174 aa1.54□□□□□ -2.16
HMGB1P1-201ENST00000522557 EXOC3-AS1Q8N2X6 119 aa1.54□□□□□ -2.16
HMGB1P1-201ENST00000522557 OR9Q1Q8NGQ5 310 aa1.54□□□□□ -2.16
HMGB1P1-201ENST00000522557 DNAJC9Q8WXX5 260 aa1.54□□□□□ -2.16
HMGB1P1-201ENST00000522557 TSC22D3Q99576 134 aa1.54□□□□□ -2.16
HMGB1P1-201ENST00000522557 OR2H1Q9GZK4 316 aa1.54□□□□□ -2.16
HMGB1P1-201ENST00000522557 SPANXA1Q9NS26 97 aa1.54□□□□□ -2.16
HMGB1P1-201ENST00000522557 DNAJC15Q9Y5T4 150 aa1.54□□□□□ -2.16
HMGB1P1-201ENST00000522557 STAB2Q8WWQ8 2551 aa1.54□□□□□ -2.16
HMGB1P1-201ENST00000522557 TENM2Q9NT68 2774 aa1.54□□□□□ -2.16
HMGB1P1-201ENST00000522557 TENM3Q9P273 2699 aa1.53□□□□□ -2.16
HMGB1P1-201ENST00000522557 DUXBA0A1W2PPF3 345 aa1.53□□□□□ -2.16
HMGB1P1-201ENST00000522557 MRPS14O60783 128 aaKnown RBP1.53□□□□□ -2.16
HMGB1P1-201ENST00000522557 TCL1BO95988 128 aa1.53□□□□□ -2.16
HMGB1P1-201ENST00000522557 GYPAP02724 150 aa1.53□□□□□ -2.16
HMGB1P1-201ENST00000522557 S100A4P26447 101 aaKnown RBP1.53□□□□□ -2.16
HMGB1P1-201ENST00000522557 GTF2A1P52655 376 aaPredicted RBP1.53□□□□□ -2.16
HMGB1P1-201ENST00000522557 LTC4SQ16873 150 aa1.53□□□□□ -2.16
HMGB1P1-201ENST00000522557 CCDC58Q4VC31 144 aa1.53□□□□□ -2.16
HMGB1P1-201ENST00000522557 TOMM20LQ6UXN7 152 aa1.53□□□□□ -2.16
HMGB1P1-201ENST00000522557 VMO1Q7Z5L0 202 aa1.53□□□□□ -2.16
HMGB1P1-201ENST00000522557 C10orf111Q8N326 155 aa1.53□□□□□ -2.16
HMGB1P1-201ENST00000522557 OR5A1Q8NGJ0 315 aa1.53□□□□□ -2.16
HMGB1P1-201ENST00000522557 IMUPQ9GZP8 106 aa1.53□□□□□ -2.16
HMGB1P1-201ENST00000522557 PBOV1Q9GZY1 135 aa1.53□□□□□ -2.16
HMGB1P1-201ENST00000522557 RERGLQ9H628 205 aa1.53□□□□□ -2.16
HMGB1P1-201ENST00000522557 OSTCQ9NRP0 149 aa1.53□□□□□ -2.16
HMGB1P1-201ENST00000522557 VWFP04275 2813 aa1.53□□□□□ -2.17
HMGB1P1-201ENST00000522557 MEGF8Q7Z7M0 2845 aa1.53□□□□□ -2.17
HMGB1P1-201ENST00000522557 TRBV6-5A0A0K0K1A5 114 aa1.52□□□□□ -2.17
HMGB1P1-201ENST00000522557 IQCF6A8MYZ5 107 aa1.52□□□□□ -2.17
HMGB1P1-201ENST00000522557 M0QZK8 103 aa1.52□□□□□ -2.17
HMGB1P1-201ENST00000522557 M0R1W7 72 aa1.52□□□□□ -2.17
HMGB1P1-201ENST00000522557 KPNA4O00629 521 aaPredicted RBP1.52□□□□□ -2.17
HMGB1P1-201ENST00000522557 CYB5BO43169 146 aa1.52□□□□□ -2.17
HMGB1P1-201ENST00000522557 BRS3P32247 399 aa1.52□□□□□ -2.17
HMGB1P1-201ENST00000522557 YPEL3P61236 119 aaPredicted RBP1.52□□□□□ -2.17
HMGB1P1-201ENST00000522557 CDK6Q00534 326 aa1.52□□□□□ -2.17
HMGB1P1-201ENST00000522557 PRB3Q04118 309 aaPredicted RBP1.52□□□□□ -2.17
HMGB1P1-201ENST00000522557 C10orf128Q5T292 105 aa1.52□□□□□ -2.17
HMGB1P1-201ENST00000522557 UNQ6190/PRO20217Q6UXQ8 127 aa1.52□□□□□ -2.17
HMGB1P1-201ENST00000522557 IFT20Q8IY31 132 aa1.52□□□□□ -2.17
HMGB1P1-201ENST00000522557 C15orf53Q8NAA6 179 aa1.52□□□□□ -2.17
HMGB1P1-201ENST00000522557 OR4D11Q8NGI4 311 aa1.52□□□□□ -2.17
HMGB1P1-201ENST00000522557 C10orf82Q8WW14 230 aa1.52□□□□□ -2.17
HMGB1P1-201ENST00000522557 PLEKHB2Q96CS7 222 aa1.52□□□□□ -2.17
HMGB1P1-201ENST00000522557 SLAMF6Q96DU3 332 aa1.52□□□□□ -2.17
HMGB1P1-201ENST00000522557 TEX37Q96LM6 180 aa1.52□□□□□ -2.17
HMGB1P1-201ENST00000522557 TPT1P8Q9HAU6 139 aa1.52□□□□□ -2.17
HMGB1P1-201ENST00000522557 BCL2L10Q9HD36 194 aa1.52□□□□□ -2.17
HMGB1P1-201ENST00000522557 KAAG1Q9UBP8 84 aa1.52□□□□□ -2.17
HMGB1P1-201ENST00000522557 OR52A1Q9UKL2 312 aa1.52□□□□□ -2.17
HMGB1P1-201ENST00000522557 EPDR1Q9UM22 224 aa1.52□□□□□ -2.17
HMGB1P1-201ENST00000522557 TNCP24821 2201 aa1.52□□□□□ -2.17
HMGB1P1-201ENST00000522557 CPSF4LA6NMK7 179 aaKnown RBP1.51□□□□□ -2.17
HMGB1P1-201ENST00000522557 J3KT08 172 aa1.51□□□□□ -2.17
HMGB1P1-201ENST00000522557 RER1O15258 196 aa1.51□□□□□ -2.17
HMGB1P1-201ENST00000522557 TPST1O60507 370 aa1.51□□□□□ -2.17
HMGB1P1-201ENST00000522557 FAM107AO95990 144 aa1.51□□□□□ -2.17
HMGB1P1-201ENST00000522557 IGF2P01344 180 aa1.51□□□□□ -2.17
HMGB1P1-201ENST00000522557 NFYBP25208 207 aa1.51□□□□□ -2.17
HMGB1P1-201ENST00000522557 POLR2JP52435 117 aaKnown RBP1.51□□□□□ -2.17
HMGB1P1-201ENST00000522557 BLCAPP62952 87 aa1.51□□□□□ -2.17
HMGB1P1-201ENST00000522557 KLRD1Q13241 179 aa1.51□□□□□ -2.17
HMGB1P1-201ENST00000522557 RRN3P1Q2M238 152 aa1.51□□□□□ -2.17
HMGB1P1-201ENST00000522557 TRAPPC6BQ86SZ2 158 aa1.51□□□□□ -2.17
HMGB1P1-201ENST00000522557 SBSPONQ8IVN8 264 aa1.51□□□□□ -2.17
HMGB1P1-201ENST00000522557 C4orf33Q8N1A6 199 aa1.51□□□□□ -2.17
HMGB1P1-201ENST00000522557 THEM6Q8WUY1 208 aa1.51□□□□□ -2.17
HMGB1P1-201ENST00000522557 SPTSSAQ969W0 71 aa1.51□□□□□ -2.17
HMGB1P1-201ENST00000522557 ISOC1Q96CN7 298 aa1.51□□□□□ -2.17
HMGB1P1-201ENST00000522557 PFDN5Q99471 154 aa1.51□□□□□ -2.17
HMGB1P1-201ENST00000522557 GINS4Q9BRT9 223 aa1.51□□□□□ -2.17
HMGB1P1-201ENST00000522557 CST9LQ9H4G1 147 aa1.51□□□□□ -2.17
HMGB1P1-201ENST00000522557 MED31Q9Y3C7 131 aa1.51□□□□□ -2.17
HMGB1P1-201ENST00000522557 TRRAPQ9Y4A5 3859 aa1.5□□□□□ -2.17
HMGB1P1-201ENST00000522557 TAX1BP3O14907 124 aa1.5□□□□□ -2.17
HMGB1P1-201ENST00000522557 DEGS1O15121 323 aa1.5□□□□□ -2.17
HMGB1P1-201ENST00000522557 LY6G6CO95867 125 aa1.5□□□□□ -2.17
HMGB1P1-201ENST00000522557 ASAH2BP0C7U1 165 aa1.5□□□□□ -2.17
HMGB1P1-201ENST00000522557 RPL7P18124 248 aaKnown RBP1.5□□□□□ -2.17
HMGB1P1-201ENST00000522557 INSL3P51460 131 aa1.5□□□□□ -2.17
HMGB1P1-201ENST00000522557 CAV3P56539 151 aa1.5□□□□□ -2.17
HMGB1P1-201ENST00000522557 CKS1BP61024 79 aa1.5□□□□□ -2.17
HMGB1P1-201ENST00000522557 EIF5AP63241 154 aaKnown RBP1.5□□□□□ -2.17
HMGB1P1-201ENST00000522557 PDE6HQ13956 83 aa1.5□□□□□ -2.17
HMGB1P1-201ENST00000522557 WHAMMP3Q1A5X7 153 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms