RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 TMUB2Q71RG4 321 aa12.8□□□□□ -0.36
PABPC1-215ENST00000520804 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.8□□□□□ -0.36
PABPC1-215ENST00000520804 A0A0D9SG52 128 aa12.79□□□□□ -0.36
PABPC1-215ENST00000520804 F5H697 171 aa12.79□□□□□ -0.36
PABPC1-215ENST00000520804 BCL2L11O43521 198 aa12.79□□□□□ -0.36
PABPC1-215ENST00000520804 ANGP03950 147 aaKnown RBP12.79□□□□□ -0.36
PABPC1-215ENST00000520804 H2AFB1P0C5Y9 115 aa12.79□□□□□ -0.36
PABPC1-215ENST00000520804 PKIAP61925 76 aa12.79□□□□□ -0.36
PABPC1-215ENST00000520804 CIRBP-AS1Q8TBR5 109 aa12.79□□□□□ -0.36
PABPC1-215ENST00000520804 CHCHD5Q9BSY4 110 aa12.79□□□□□ -0.36
PABPC1-215ENST00000520804 KIF25-AS1Q9Y6Z4 181 aa12.79□□□□□ -0.36
PABPC1-215ENST00000520804 KANTRA0A1W2PQU2 76 aa12.78□□□□□ -0.36
PABPC1-215ENST00000520804 SSTP61278 116 aa12.78□□□□□ -0.36
PABPC1-215ENST00000520804 TMEM97Q5BJF2 176 aa12.78□□□□□ -0.36
PABPC1-215ENST00000520804 NTM-AS1Q6ZSK4 140 aa12.78□□□□□ -0.36
PABPC1-215ENST00000520804 VAX2Q9UIW0 290 aa12.78□□□□□ -0.36
PABPC1-215ENST00000520804 RPL35P42766 123 aaKnown RBP12.77□□□□□ -0.37
PABPC1-215ENST00000520804 KRTAP10-4P60372 401 aaPredicted RBP12.77□□□□□ -0.37
PABPC1-215ENST00000520804 SMIM17P0DL12 118 aa12.76□□□□□ -0.37
PABPC1-215ENST00000520804 EIF5AP63241 154 aaKnown RBP12.76□□□□□ -0.37
PABPC1-215ENST00000520804 MIAQ16674 131 aa12.76□□□□□ -0.37
PABPC1-215ENST00000520804 AP1S3Q96PC3 154 aa12.76□□□□□ -0.37
PABPC1-215ENST00000520804 USP17L23D6RBM5 183 aa12.75□□□□□ -0.37
PABPC1-215ENST00000520804 C11orf52Q96A22 123 aa12.75□□□□□ -0.37
PABPC1-215ENST00000520804 DERL1Q9BUN8 251 aa12.75□□□□□ -0.37
PABPC1-215ENST00000520804 HLA-DQA1P01909 254 aa12.74□□□□□ -0.37
PABPC1-215ENST00000520804 CCL20P78556 96 aa12.74□□□□□ -0.37
PABPC1-215ENST00000520804 MANBALQ9NQG1 85 aa12.74□□□□□ -0.37
PABPC1-215ENST00000520804 PRR34Q9NV39 138 aa12.74□□□□□ -0.37
PABPC1-215ENST00000520804 LRP1Q07954 4544 aaKnown RBP12.74□□□□□ -0.37
PABPC1-215ENST00000520804 TRBV25-1A0A075B6N4 114 aa12.73□□□□□ -0.37
PABPC1-215ENST00000520804 IGLV2-8P01709 118 aa12.73□□□□□ -0.37
PABPC1-215ENST00000520804 RBX1P62877 108 aa12.73□□□□□ -0.37
PABPC1-215ENST00000520804 GNG13Q9P2W3 67 aa12.73□□□□□ -0.37
PABPC1-215ENST00000520804 IGLC6P0CF74 106 aa12.72□□□□□ -0.37
PABPC1-215ENST00000520804 GZMBP10144 247 aa12.72□□□□□ -0.37
PABPC1-215ENST00000520804 GAGE6Q13070 117 aa12.72□□□□□ -0.37
PABPC1-215ENST00000520804 CENPWQ5EE01 88 aa12.72□□□□□ -0.37
PABPC1-215ENST00000520804 FAT3Q8TDW7 4589 aa12.71□□□□□ -0.37
PABPC1-215ENST00000520804 M0QY20 66 aa12.71□□□□□ -0.37
PABPC1-215ENST00000520804 PRSS1P07477 247 aa12.71□□□□□ -0.37
PABPC1-215ENST00000520804 IQCJQ1A5X6 159 aa12.71□□□□□ -0.37
PABPC1-215ENST00000520804 KRTAP26-1Q6PEX3 210 aa12.71□□□□□ -0.37
PABPC1-215ENST00000520804 CLPSL2Q6UWE3 100 aa12.71□□□□□ -0.37
PABPC1-215ENST00000520804 LINC00269Q8N2A0 174 aa12.71□□□□□ -0.37
PABPC1-215ENST00000520804 FER1L6-AS1Q8NA97 138 aa12.71□□□□□ -0.37
PABPC1-215ENST00000520804 TPPP3Q9BW30 176 aa12.71□□□□□ -0.37
PABPC1-215ENST00000520804 TRAV1-1A0A0B4J248 108 aa12.7□□□□□ -0.38
PABPC1-215ENST00000520804 MGPP08493 103 aa12.7□□□□□ -0.38
PABPC1-215ENST00000520804 RPS20P60866 119 aaKnown RBP12.7□□□□□ -0.38
PABPC1-215ENST00000520804 DGAT2L7PQ6IED9 249 aa12.7□□□□□ -0.38
PABPC1-215ENST00000520804 OR2D3Q8NGH3 330 aa12.7□□□□□ -0.38
PABPC1-215ENST00000520804 DAZAP1Q96EP5 407 aaKnown RBP12.7□□□□□ -0.38
PABPC1-215ENST00000520804 IGHV1-24A0A0C4DH33 117 aa12.69□□□□□ -0.38
PABPC1-215ENST00000520804 C19orf71A6NCJ1 209 aa12.69□□□□□ -0.38
PABPC1-215ENST00000520804 H7C1H1 209 aa12.69□□□□□ -0.38
PABPC1-215ENST00000520804 CACNG7P62955 275 aa12.69□□□□□ -0.38
PABPC1-215ENST00000520804 SUMO4Q6EEV6 95 aa12.69□□□□□ -0.38
PABPC1-215ENST00000520804 RAB5CP51148 216 aa12.68□□□□□ -0.38
PABPC1-215ENST00000520804 C9orf163Q8N9P6 203 aa12.68□□□□□ -0.38
PABPC1-215ENST00000520804 SMIM12Q96EX1 92 aa12.68□□□□□ -0.38
PABPC1-215ENST00000520804 RAB19A4D1S5 217 aa12.67□□□□□ -0.38
PABPC1-215ENST00000520804 GNG4P50150 75 aa12.67□□□□□ -0.38
PABPC1-215ENST00000520804 TEX46H3BTG2 121 aa12.66□□□□□ -0.38
PABPC1-215ENST00000520804 REG3AQ06141 175 aa12.66□□□□□ -0.38
PABPC1-215ENST00000520804 XKRY2A2RUG3 117 aa12.65□□□□□ -0.38
PABPC1-215ENST00000520804 F2Z2F3 143 aa12.65□□□□□ -0.38
PABPC1-215ENST00000520804 OXTP01178 125 aa12.65□□□□□ -0.38
PABPC1-215ENST00000520804 NKX2-5P52952 324 aaPredicted RBP12.65□□□□□ -0.38
PABPC1-215ENST00000520804 MEF2BQ02080 365 aaPredicted RBP12.65□□□□□ -0.38
PABPC1-215ENST00000520804 EIF5AL1Q6IS14 154 aaKnown RBP12.65□□□□□ -0.38
PABPC1-215ENST00000520804 RASL11AQ6T310 242 aa12.65□□□□□ -0.38
PABPC1-215ENST00000520804 C20orf203Q8NBC4 194 aa12.65□□□□□ -0.38
PABPC1-215ENST00000520804 PKHD1L1Q86WI1 4243 aa12.64□□□□□ -0.39
PABPC1-215ENST00000520804 PDE6DO43924 150 aa12.64□□□□□ -0.39
PABPC1-215ENST00000520804 P01737 135 aa12.64□□□□□ -0.39
PABPC1-215ENST00000520804 RPL37AP61513 92 aaKnown RBP12.64□□□□□ -0.39
PABPC1-215ENST00000520804 CLRN3Q8NCR9 226 aa12.64□□□□□ -0.39
PABPC1-215ENST00000520804 TRBV20OR9-2A0A075B6H5 130 aa12.63□□□□□ -0.39
PABPC1-215ENST00000520804 IGLV10-54A0A075B6I4 117 aa12.63□□□□□ -0.39
PABPC1-215ENST00000520804 TRGC1P0CF51 173 aa12.63□□□□□ -0.39
PABPC1-215ENST00000520804 SULT1A2P50226 295 aa12.63□□□□□ -0.39
PABPC1-215ENST00000520804 TMEM243Q9BU79 118 aa12.63□□□□□ -0.39
PABPC1-215ENST00000520804 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.63□□□□□ -0.39
PABPC1-215ENST00000520804 TRAV8-4A0A0B4J246 113 aa12.62□□□□□ -0.39
PABPC1-215ENST00000520804 A0A1B0GUV1 79 aa12.62□□□□□ -0.39
PABPC1-215ENST00000520804 IFNA1P01562 189 aa12.62□□□□□ -0.39
PABPC1-215ENST00000520804 LYZL1Q6UWQ5 148 aa12.62□□□□□ -0.39
PABPC1-215ENST00000520804 SDIM1Q6ZPB5 146 aa12.62□□□□□ -0.39
PABPC1-215ENST00000520804 PGLYRP4Q96LB8 373 aa12.62□□□□□ -0.39
PABPC1-215ENST00000520804 DPH3P1Q9H4G8 78 aa12.62□□□□□ -0.39
PABPC1-215ENST00000520804 NIT2Q9NQR4 276 aa12.62□□□□□ -0.39
PABPC1-215ENST00000520804 BIN3Q9NQY0 253 aa12.62□□□□□ -0.39
PABPC1-215ENST00000520804 MED9Q9NWA0 146 aa12.62□□□□□ -0.39
PABPC1-215ENST00000520804 IGLV4-60A0A075B6I1 120 aa12.61□□□□□ -0.39
PABPC1-215ENST00000520804 PANO1I0J062 215 aa12.61□□□□□ -0.39
PABPC1-215ENST00000520804 NTF3P20783 257 aa12.61□□□□□ -0.39
PABPC1-215ENST00000520804 SERTAD4-AS1Q5TG53 156 aa12.61□□□□□ -0.39
PABPC1-215ENST00000520804 C9orf62Q8N4C0 152 aa12.61□□□□□ -0.39
PABPC1-215ENST00000520804 HMCN2Q8NDA2 5059 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms