RNA–Protein interactions for RNA: ENST00000519540.5

FAM49B-214, Transcript of family with sequence similarity 49 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49B, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-214ENST00000519540 ZFP2Q6ZN57 461 aa13.35□□□□□ -0.27
FAM49B-214ENST00000519540 C1QTNF4Q9BXJ3 329 aa13.35□□□□□ -0.27
FAM49B-214ENST00000519540 H7C1H1 209 aa13.35□□□□□ -0.27
FAM49B-214ENST00000519540 Q6ZN92 141 aa13.35□□□□□ -0.27
FAM49B-214ENST00000519540 CSNK1G2-AS1Q8NCQ2 148 aa13.35□□□□□ -0.27
FAM49B-214ENST00000519540 SCGB3A1Q96QR1 104 aa13.35□□□□□ -0.27
FAM49B-214ENST00000519540 TMEM263Q8WUH6 116 aaKnown RBP13.34□□□□□ -0.27
FAM49B-214ENST00000519540 ZMAT4Q9H898 229 aa13.34□□□□□ -0.27
FAM49B-214ENST00000519540 NACAE9PAV3 2078 aa13.34□□□□□ -0.27
FAM49B-214ENST00000519540 RS1O15537 224 aa13.34□□□□□ -0.27
FAM49B-214ENST00000519540 DEFB104AQ8WTQ1 72 aa13.34□□□□□ -0.27
FAM49B-214ENST00000519540 TENM1Q9UKZ4 2725 aa13.33□□□□□ -0.28
FAM49B-214ENST00000519540 G0S2P27469 103 aa13.33□□□□□ -0.28
FAM49B-214ENST00000519540 Q6ZSN1 163 aa13.33□□□□□ -0.28
FAM49B-214ENST00000519540 RHODO00212 210 aa13.32□□□□□ -0.28
FAM49B-214ENST00000519540 GTSCR1Q86UQ5 136 aa13.32□□□□□ -0.28
FAM49B-214ENST00000519540 SNHG12Q9BXW3 62 aa13.32□□□□□ -0.28
FAM49B-214ENST00000519540 ERASQ7Z444 233 aa13.32□□□□□ -0.28
FAM49B-214ENST00000519540 M0R143 59 aa13.31□□□□□ -0.28
FAM49B-214ENST00000519540 EREGO14944 169 aa13.31□□□□□ -0.28
FAM49B-214ENST00000519540 P0DMU3 169 aa13.31□□□□□ -0.28
FAM49B-214ENST00000519540 FAM231AP0DMU4 169 aa13.31□□□□□ -0.28
FAM49B-214ENST00000519540 FAM231CP0DMU5 169 aa13.31□□□□□ -0.28
FAM49B-214ENST00000519540 HNRNPA3P51991 378 aaKnown RBP13.31□□□□□ -0.28
FAM49B-214ENST00000519540 STPG4Q8N801 248 aa13.31□□□□□ -0.28
FAM49B-214ENST00000519540 CYSLTR1Q9Y271 337 aa13.31□□□□□ -0.28
FAM49B-214ENST00000519540 A0A087WX48 190 aa13.3□□□□□ -0.28
FAM49B-214ENST00000519540 RIPPLY3P57055 190 aa13.3□□□□□ -0.28
FAM49B-214ENST00000519540 ANKRD39Q53RE8 183 aa13.3□□□□□ -0.28
FAM49B-214ENST00000519540 TRGV1A0A0A0MS02 117 aa13.3□□□□□ -0.28
FAM49B-214ENST00000519540 TRAV12-1A0A0B4J245 112 aa13.3□□□□□ -0.28
FAM49B-214ENST00000519540 LINC01549A6NIU2 74 aa13.3□□□□□ -0.28
FAM49B-214ENST00000519540 I3L3M4 83 aa13.3□□□□□ -0.28
FAM49B-214ENST00000519540 MRPL52Q86TS9 123 aaKnown RBP13.3□□□□□ -0.28
FAM49B-214ENST00000519540 TP53TG1Q9Y2A0 90 aa13.3□□□□□ -0.28
FAM49B-214ENST00000519540 TSHBP01222 138 aa13.29□□□□□ -0.28
FAM49B-214ENST00000519540 IGHV3-53P01767 116 aa13.29□□□□□ -0.28
FAM49B-214ENST00000519540 IGKCP01834 107 aa13.29□□□□□ -0.28
FAM49B-214ENST00000519540 MRPL35Q9NZE8 188 aaKnown RBP13.29□□□□□ -0.28
FAM49B-214ENST00000519540 HHLA3Q9XRX5 114 aa13.29□□□□□ -0.28
FAM49B-214ENST00000519540 TEP1Q99973 2627 aaKnown RBP13.29□□□□□ -0.28
FAM49B-214ENST00000519540 DPM2O94777 84 aa13.29□□□□□ -0.28
FAM49B-214ENST00000519540 DAZ2Q13117 558 aaKnown RBP13.29□□□□□ -0.28
FAM49B-214ENST00000519540 LBHQ53QV2 105 aaPredicted RBP13.29□□□□□ -0.28
FAM49B-214ENST00000519540 SLC25A34Q6PIV7 304 aa13.29□□□□□ -0.28
FAM49B-214ENST00000519540 NEXN-AS1Q8NBZ9 246 aa13.29□□□□□ -0.28
FAM49B-214ENST00000519540 C16orf74Q96GX8 76 aa13.29□□□□□ -0.28
FAM49B-214ENST00000519540 Q9UF83 564 aa13.29□□□□□ -0.28
FAM49B-214ENST00000519540 MRPS16Q9Y3D3 137 aaKnown RBP13.29□□□□□ -0.28
FAM49B-214ENST00000519540 VWFP04275 2813 aa13.28□□□□□ -0.28
FAM49B-214ENST00000519540 ATRQ13535 2644 aa13.28□□□□□ -0.28
FAM49B-214ENST00000519540 PLAC8L1A1L4L8 177 aa13.28□□□□□ -0.28
FAM49B-214ENST00000519540 IGIPA6NJ69 53 aa13.28□□□□□ -0.28
FAM49B-214ENST00000519540 RPL39P62891 51 aaKnown RBP13.28□□□□□ -0.28
FAM49B-214ENST00000519540 RHOHQ15669 191 aa13.28□□□□□ -0.28
FAM49B-214ENST00000519540 Q6ZTI0 123 aa13.28□□□□□ -0.28
FAM49B-214ENST00000519540 WFDC9Q8NEX5 89 aa13.28□□□□□ -0.28
FAM49B-214ENST00000519540 TP73-AS1Q9UF72 201 aa13.28□□□□□ -0.28
FAM49B-214ENST00000519540 TNFRSF18Q9Y5U5 241 aa13.28□□□□□ -0.28
FAM49B-214ENST00000519540 COX8AP10176 69 aa13.27□□□□□ -0.28
FAM49B-214ENST00000519540 OR4C5Q8NGB2 326 aa13.27□□□□□ -0.28
FAM49B-214ENST00000519540 BAALCQ8WXS3 180 aa13.27□□□□□ -0.28
FAM49B-214ENST00000519540 RRN3P1Q2M238 152 aa13.27□□□□□ -0.29
FAM49B-214ENST00000519540 C2orf88Q9BSF0 95 aa13.27□□□□□ -0.29
FAM49B-214ENST00000519540 NOP10Q9NPE3 64 aaKnown RBP13.27□□□□□ -0.29
FAM49B-214ENST00000519540 NOTCH3Q9UM47 2321 aa13.25□□□□□ -0.29
FAM49B-214ENST00000519540 ZNF479Q96JC4 524 aa13.25□□□□□ -0.29
FAM49B-214ENST00000519540 DNAJC30Q96LL9 226 aa13.25□□□□□ -0.29
FAM49B-214ENST00000519540 F8VRH5 84 aa13.24□□□□□ -0.29
FAM49B-214ENST00000519540 PLNP26678 52 aa13.24□□□□□ -0.29
FAM49B-214ENST00000519540 TCTAP57738 103 aa13.24□□□□□ -0.29
FAM49B-214ENST00000519540 KRTAP24-1Q3LI83 254 aa13.24□□□□□ -0.29
FAM49B-214ENST00000519540 C20orf203Q8NBC4 194 aa13.24□□□□□ -0.29
FAM49B-214ENST00000519540 TMEM141Q96I45 108 aa13.24□□□□□ -0.29
FAM49B-214ENST00000519540 TIMM17AQ99595 171 aa13.24□□□□□ -0.29
FAM49B-214ENST00000519540 OVOL2Q9BRP0 275 aa13.24□□□□□ -0.29
FAM49B-214ENST00000519540 CHTOPQ9Y3Y2 248 aaKnown RBP13.24□□□□□ -0.29
FAM49B-214ENST00000519540 PRSS29PA6NIE9 313 aa13.23□□□□□ -0.29
FAM49B-214ENST00000519540 TRAV4A0A0B4J268 109 aa13.23□□□□□ -0.29
FAM49B-214ENST00000519540 CYSRT1A8MQ03 144 aa13.23□□□□□ -0.29
FAM49B-214ENST00000519540 FGF6P10767 208 aa13.22□□□□□ -0.29
FAM49B-214ENST00000519540 ZC2HC1BQ5TFG8 222 aa13.22□□□□□ -0.29
FAM49B-214ENST00000519540 WIPF1O43516 503 aa13.21□□□□□ -0.29
FAM49B-214ENST00000519540 BOD1L2Q8IYS8 172 aa13.2□□□□□ -0.3
FAM49B-214ENST00000519540 GAGE12BA1L429 117 aa13.2□□□□□ -0.3
FAM49B-214ENST00000519540 GAGE7O76087 117 aa13.2□□□□□ -0.3
FAM49B-214ENST00000519540 GAGE12FP0CL80 117 aa13.2□□□□□ -0.3
FAM49B-214ENST00000519540 GAGE12GP0CL81 117 aa13.2□□□□□ -0.3
FAM49B-214ENST00000519540 GAGE12IP0CL82 117 aa13.2□□□□□ -0.3
FAM49B-214ENST00000519540 NMUP48645 174 aa13.2□□□□□ -0.3
FAM49B-214ENST00000519540 PMVKQ15126 192 aa13.2□□□□□ -0.3
FAM49B-214ENST00000519540 BATFQ16520 125 aa13.2□□□□□ -0.3
FAM49B-214ENST00000519540 IGKV2D-26A0A0A0MRZ7 120 aa13.19□□□□□ -0.3
FAM49B-214ENST00000519540 CST9LQ9H4G1 147 aa13.19□□□□□ -0.3
FAM49B-214ENST00000519540 PCP2Q8IVA1 136 aa13.18□□□□□ -0.3
FAM49B-214ENST00000519540 TRGV2A0A075B6R0 118 aa13.18□□□□□ -0.3
FAM49B-214ENST00000519540 DLEU1O43261 78 aa13.18□□□□□ -0.3
FAM49B-214ENST00000519540 C2orf91Q6ZV80 131 aa13.18□□□□□ -0.3
FAM49B-214ENST00000519540 BAHCC1Q9P281 2608 aa13.17□□□□□ -0.3
FAM49B-214ENST00000519540 HINT1P49773 126 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 522.9 ms