RNA–Protein interactions for RNA: ENST00000519054.5

SKP1-205, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-205ENST00000519054 UBE2D1P51668 147 aa0.45□□□□□ -2.34
SKP1-205ENST00000519054 DEFA3P59666 94 aa0.45□□□□□ -2.34
SKP1-205ENST00000519054 DEFA5Q01523 94 aa0.45□□□□□ -2.34
SKP1-205ENST00000519054 DIAPH2-AS1Q14236 149 aa0.45□□□□□ -2.34
SKP1-205ENST00000519054 TSNQ15631 228 aaKnown RBP0.45□□□□□ -2.34
SKP1-205ENST00000519054 OR6V1Q8N148 313 aa0.45□□□□□ -2.34
SKP1-205ENST00000519054 OR51A2Q8NGJ7 313 aa0.45□□□□□ -2.34
SKP1-205ENST00000519054 FAM172AQ8WUF8 416 aa0.45□□□□□ -2.34
SKP1-205ENST00000519054 C2orf50Q96LR7 162 aa0.45□□□□□ -2.34
SKP1-205ENST00000519054 OSTCQ9NRP0 149 aa0.45□□□□□ -2.34
SKP1-205ENST00000519054 GLTPQ9NZD2 209 aa0.45□□□□□ -2.34
SKP1-205ENST00000519054 FBXO5Q9UKT4 447 aa0.45□□□□□ -2.34
SKP1-205ENST00000519054 hCG_1818297A0A087WSY0 165 aa0.44□□□□□ -2.34
SKP1-205ENST00000519054 A0A087WX48 190 aa0.44□□□□□ -2.34
SKP1-205ENST00000519054 A8MT66 165 aa0.44□□□□□ -2.34
SKP1-205ENST00000519054 NDUFA2O43678 99 aa0.44□□□□□ -2.34
SKP1-205ENST00000519054 SMIM17P0DL12 118 aa0.44□□□□□ -2.34
SKP1-205ENST00000519054 APELAP0DMC3 54 aa0.44□□□□□ -2.34
SKP1-205ENST00000519054 MGST1P10620 155 aaKnown RBP0.44□□□□□ -2.34
SKP1-205ENST00000519054 SRP9P49458 86 aaKnown RBP0.44□□□□□ -2.34
SKP1-205ENST00000519054 TPPP2P59282 170 aa0.44□□□□□ -2.34
SKP1-205ENST00000519054 RAB4BP61018 213 aa0.44□□□□□ -2.34
SKP1-205ENST00000519054 RHOGP84095 191 aa0.44□□□□□ -2.34
SKP1-205ENST00000519054 KRTAP21-1Q3LI58 79 aa0.44□□□□□ -2.34
SKP1-205ENST00000519054 C1orf137Q5JT78 98 aa0.44□□□□□ -2.34
SKP1-205ENST00000519054 Q8IYB0 196 aa0.44□□□□□ -2.34
SKP1-205ENST00000519054 LINC00471Q8N535 108 aa0.44□□□□□ -2.34
SKP1-205ENST00000519054 MNS1Q8NEH6 495 aa0.44□□□□□ -2.34
SKP1-205ENST00000519054 OR11H6Q8NGC7 330 aa0.44□□□□□ -2.34
SKP1-205ENST00000519054 OR8D4Q8NGM9 314 aa0.44□□□□□ -2.34
SKP1-205ENST00000519054 OR9Q1Q8NGQ5 310 aa0.44□□□□□ -2.34
SKP1-205ENST00000519054 GPR146Q96CH1 333 aa0.44□□□□□ -2.34
SKP1-205ENST00000519054 CMSS1Q9BQ75 279 aaKnown RBP0.44□□□□□ -2.34
SKP1-205ENST00000519054 CCDC90BQ9GZT6 254 aa0.44□□□□□ -2.34
SKP1-205ENST00000519054 C6orf62Q9GZU0 229 aaPredicted RBP0.44□□□□□ -2.34
SKP1-205ENST00000519054 KAAG1Q9UBP8 84 aa0.44□□□□□ -2.34
SKP1-205ENST00000519054 EPDR1Q9UM22 224 aa0.44□□□□□ -2.34
SKP1-205ENST00000519054 ZFP30Q9Y2G7 519 aa0.44□□□□□ -2.34
SKP1-205ENST00000519054 SNURFQ9Y675 71 aa0.44□□□□□ -2.34
SKP1-205ENST00000519054 A0A087X0T9 212 aa0.43□□□□□ -2.34
SKP1-205ENST00000519054 TRBV6-8A0A0A6YYG3 113 aa0.43□□□□□ -2.34
SKP1-205ENST00000519054 TRAV4A0A0B4J268 109 aa0.43□□□□□ -2.34
SKP1-205ENST00000519054 FAM159BA6NKW6 160 aa0.43□□□□□ -2.34
SKP1-205ENST00000519054 INE1O15225 51 aa0.43□□□□□ -2.34
SKP1-205ENST00000519054 HYPMO75409 117 aa0.43□□□□□ -2.34
SKP1-205ENST00000519054 DEFB130BP0DP73 79 aa0.43□□□□□ -2.34
SKP1-205ENST00000519054 DEFB130AP0DP74 79 aa0.43□□□□□ -2.34
SKP1-205ENST00000519054 PIPP12273 146 aaPredicted RBP0.43□□□□□ -2.34
SKP1-205ENST00000519054 PPIBP23284 216 aaKnown RBP0.43□□□□□ -2.34
SKP1-205ENST00000519054 CBLN1P23435 193 aa0.43□□□□□ -2.34
SKP1-205ENST00000519054 S100A4P26447 101 aaKnown RBP0.43□□□□□ -2.34
SKP1-205ENST00000519054 CASP1P29466 404 aa0.43□□□□□ -2.34
SKP1-205ENST00000519054 SDC4P31431 198 aa0.43□□□□□ -2.34
SKP1-205ENST00000519054 AP3S2P59780 193 aa0.43□□□□□ -2.34
SKP1-205ENST00000519054 YPEL3P61236 119 aaPredicted RBP0.43□□□□□ -2.34
SKP1-205ENST00000519054 MINOS1Q5TGZ0 78 aa0.43□□□□□ -2.34
SKP1-205ENST00000519054 TMED4Q7Z7H5 227 aa0.43□□□□□ -2.34
SKP1-205ENST00000519054 TRAPPC6BQ86SZ2 158 aa0.43□□□□□ -2.34
SKP1-205ENST00000519054 WFDC10BQ8IUB3 73 aa0.43□□□□□ -2.34
SKP1-205ENST00000519054 TCTEX1D1Q8N7M0 179 aa0.43□□□□□ -2.34
SKP1-205ENST00000519054 STAG3L4Q8TBR4 150 aa0.43□□□□□ -2.34
SKP1-205ENST00000519054 SFT2D1Q8WV19 159 aa0.43□□□□□ -2.34
SKP1-205ENST00000519054 PARVBQ9HBI1 364 aa0.43□□□□□ -2.34
SKP1-205ENST00000519054 TMEM14BQ9NUH8 114 aa0.43□□□□□ -2.34
SKP1-205ENST00000519054 LY96Q9Y6Y9 160 aa0.43□□□□□ -2.34
SKP1-205ENST00000519054 A0A096LPF7 62 aa0.42□□□□□ -2.34
SKP1-205ENST00000519054 TRBV6-7A0A0A0MS04 114 aa0.42□□□□□ -2.34
SKP1-205ENST00000519054 C7orf71A4D174 169 aa0.42□□□□□ -2.34
SKP1-205ENST00000519054 C1orf196B1AJZ1 125 aa0.42□□□□□ -2.34
SKP1-205ENST00000519054 OR7C1O76099 320 aaPredicted RBP0.42□□□□□ -2.34
SKP1-205ENST00000519054 CST2P09228 141 aa0.42□□□□□ -2.34
SKP1-205ENST00000519054 EVI2AP22794 236 aa0.42□□□□□ -2.34
SKP1-205ENST00000519054 SERPINB9P50453 376 aa0.42□□□□□ -2.34
SKP1-205ENST00000519054 FADDQ13158 208 aa0.42□□□□□ -2.34
SKP1-205ENST00000519054 OR2T2Q6IF00 324 aa0.42□□□□□ -2.34
SKP1-205ENST00000519054 RPS27LQ71UM5 84 aaKnown RBP0.42□□□□□ -2.34
SKP1-205ENST00000519054 ZHX1-C8orf76Q96EF9 292 aa0.42□□□□□ -2.34
SKP1-205ENST00000519054 LINC00526Q96FQ7 95 aa0.42□□□□□ -2.34
SKP1-205ENST00000519054 CCDC115Q96NT0 180 aa0.42□□□□□ -2.34
SKP1-205ENST00000519054 GAFA1Q96PS6 74 aa0.42□□□□□ -2.34
SKP1-205ENST00000519054 SIGMAR1Q99720 223 aa0.42□□□□□ -2.34
SKP1-205ENST00000519054 HIST1H2BLQ99880 126 aa0.42□□□□□ -2.34
SKP1-205ENST00000519054 LINC00470Q9BZP3 86 aa0.42□□□□□ -2.34
SKP1-205ENST00000519054 TMEM126AQ9H061 195 aa0.42□□□□□ -2.34
SKP1-205ENST00000519054 KLK9Q9UKQ9 250 aa0.42□□□□□ -2.34
SKP1-205ENST00000519054 NDUFAF1Q9Y375 327 aa0.42□□□□□ -2.34
SKP1-205ENST00000519054 UTP11Q9Y3A2 253 aaKnown RBP0.42□□□□□ -2.34
SKP1-205ENST00000519054 TRAV5A0A0B4J249 113 aa0.41□□□□□ -2.34
SKP1-205ENST00000519054 SULT1B1O43704 296 aa0.41□□□□□ -2.34
SKP1-205ENST00000519054 E2F6O75461 281 aa0.41□□□□□ -2.34
SKP1-205ENST00000519054 SERPINA1P01009 418 aa0.41□□□□□ -2.34
SKP1-205ENST00000519054 S100A6P06703 90 aa0.41□□□□□ -2.34
SKP1-205ENST00000519054 DYNLT1P63172 113 aa0.41□□□□□ -2.34
SKP1-205ENST00000519054 REEP5Q00765 189 aa0.41□□□□□ -2.34
SKP1-205ENST00000519054 SPINK9Q5DT21 86 aa0.41□□□□□ -2.34
SKP1-205ENST00000519054 C3orf33Q6P1S2 294 aa0.41□□□□□ -2.34
SKP1-205ENST00000519054 KRTAP19-3Q7Z4W3 81 aa0.41□□□□□ -2.34
SKP1-205ENST00000519054 Q8TAT8 98 aa0.41□□□□□ -2.34
SKP1-205ENST00000519054 SLAMF6Q96DU3 332 aa0.41□□□□□ -2.34
SKP1-205ENST00000519054 TEX37Q96LM6 180 aa0.41□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 433.5 ms