RNA–Protein interactions for RNA: ENST00000517921.1

PABPC1-203, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 885 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-203ENST00000517921 ZMAT4Q9H898 229 aa7.48□□□□□ -1.21
PABPC1-203ENST00000517921 H7C1H1 209 aa7.47□□□□□ -1.21
PABPC1-203ENST00000517921 K7EQD1 137 aa7.47□□□□□ -1.21
PABPC1-203ENST00000517921 P0DMU3 169 aa7.47□□□□□ -1.21
PABPC1-203ENST00000517921 FAM231AP0DMU4 169 aa7.47□□□□□ -1.21
PABPC1-203ENST00000517921 FAM231CP0DMU5 169 aa7.47□□□□□ -1.21
PABPC1-203ENST00000517921 FHL2Q14192 279 aa7.47□□□□□ -1.21
PABPC1-203ENST00000517921 C12orf74Q32Q52 190 aa7.47□□□□□ -1.21
PABPC1-203ENST00000517921 URB1-AS1Q96HZ7 61 aa7.47□□□□□ -1.21
PABPC1-203ENST00000517921 MAP1LC3AQ9H492 121 aa7.47□□□□□ -1.21
PABPC1-203ENST00000517921 IGLV2-18A0A075B6J9 118 aa7.46□□□□□ -1.22
PABPC1-203ENST00000517921 TRGV4A0A0C4DH28 118 aa7.46□□□□□ -1.22
PABPC1-203ENST00000517921 TRBV6-5A0A0K0K1A5 114 aa7.46□□□□□ -1.22
PABPC1-203ENST00000517921 LOC389332A0A1B0GUA5 103 aa7.46□□□□□ -1.22
PABPC1-203ENST00000517921 PRSS47A8MTI9 375 aa7.46□□□□□ -1.22
PABPC1-203ENST00000517921 SERF1AO75920 110 aa7.46□□□□□ -1.22
PABPC1-203ENST00000517921 PPP1R17O96001 155 aa7.46□□□□□ -1.22
PABPC1-203ENST00000517921 NHLRC4P0CG21 123 aaPredicted RBP7.46□□□□□ -1.22
PABPC1-203ENST00000517921 SUMO2P61956 95 aaKnown RBP7.46□□□□□ -1.22
PABPC1-203ENST00000517921 BAGE3Q86Y29 109 aa7.46□□□□□ -1.22
PABPC1-203ENST00000517921 NEXN-AS1Q8NBZ9 246 aa7.46□□□□□ -1.22
PABPC1-203ENST00000517921 NIT2Q9NQR4 276 aa7.46□□□□□ -1.22
PABPC1-203ENST00000517921 Q9UF83 564 aa7.46□□□□□ -1.22
PABPC1-203ENST00000517921 TRBV6-4A0A1B0GX49 114 aa7.45□□□□□ -1.22
PABPC1-203ENST00000517921 C5orf52A6NGY3 159 aa7.45□□□□□ -1.22
PABPC1-203ENST00000517921 NUPR1O60356 82 aa7.45□□□□□ -1.22
PABPC1-203ENST00000517921 S100A6P06703 90 aa7.45□□□□□ -1.22
PABPC1-203ENST00000517921 HOXA5P20719 270 aa7.45□□□□□ -1.22
PABPC1-203ENST00000517921 IFI27P40305 119 aaPredicted RBP7.45□□□□□ -1.22
PABPC1-203ENST00000517921 RPL32P62910 135 aaKnown RBP7.45□□□□□ -1.22
PABPC1-203ENST00000517921 SLC25A29Q8N8R3 303 aa7.45□□□□□ -1.22
PABPC1-203ENST00000517921 C20orf78Q9BR46 151 aa7.45□□□□□ -1.22
PABPC1-203ENST00000517921 SMIM2Q9BVW6 85 aa7.45□□□□□ -1.22
PABPC1-203ENST00000517921 ST20Q9HBF5 79 aa7.45□□□□□ -1.22
PABPC1-203ENST00000517921 TRBV10-1A0A0K0K1A3 114 aa7.44□□□□□ -1.22
PABPC1-203ENST00000517921 ATP5G1P05496 136 aa7.44□□□□□ -1.22
PABPC1-203ENST00000517921 ESDP10768 282 aa7.44□□□□□ -1.22
PABPC1-203ENST00000517921 PMCHP20382 165 aa7.44□□□□□ -1.22
PABPC1-203ENST00000517921 POLR2KP53803 58 aaKnown RBP7.44□□□□□ -1.22
PABPC1-203ENST00000517921 SNRPEP62304 92 aaKnown RBP7.44□□□□□ -1.22
PABPC1-203ENST00000517921 RHOHQ15669 191 aa7.44□□□□□ -1.22
PABPC1-203ENST00000517921 RNASEKQ6P5S7 137 aaKnown RBP7.44□□□□□ -1.22
PABPC1-203ENST00000517921 Q8N8P6 123 aa7.44□□□□□ -1.22
PABPC1-203ENST00000517921 TMEM70Q9BUB7 260 aa7.44□□□□□ -1.22
PABPC1-203ENST00000517921 NXT2Q9NPJ8 142 aaKnown RBP7.44□□□□□ -1.22
PABPC1-203ENST00000517921 SDHAF1A6NFY7 115 aa7.43□□□□□ -1.22
PABPC1-203ENST00000517921 LINC01546A6NGU7 62 aa7.43□□□□□ -1.22
PABPC1-203ENST00000517921 CRYBA4P53673 196 aa7.43□□□□□ -1.22
PABPC1-203ENST00000517921 Q6ZTC4 211 aa7.43□□□□□ -1.22
PABPC1-203ENST00000517921 FA2HQ7L5A8 372 aa7.43□□□□□ -1.22
PABPC1-203ENST00000517921 NEGR1Q7Z3B1 354 aa7.43□□□□□ -1.22
PABPC1-203ENST00000517921 NIT1Q86X76 327 aa7.43□□□□□ -1.22
PABPC1-203ENST00000517921 HIST3H2BBQ8N257 126 aa7.43□□□□□ -1.22
PABPC1-203ENST00000517921 PRSS3P2Q8NHM4 247 aa7.43□□□□□ -1.22
PABPC1-203ENST00000517921 CHCHD1Q96BP2 118 aaKnown RBP7.43□□□□□ -1.22
PABPC1-203ENST00000517921 DNAJC30Q96LL9 226 aa7.43□□□□□ -1.22
PABPC1-203ENST00000517921 WWC2-AS2Q96NR7 200 aa7.43□□□□□ -1.22
PABPC1-203ENST00000517921 TRBV27A0A0K0K1C4 114 aa7.42□□□□□ -1.22
PABPC1-203ENST00000517921 LOC100131303A0A0U1RQF7 123 aa7.42□□□□□ -1.22
PABPC1-203ENST00000517921 LINC00614P0C842 121 aa7.42□□□□□ -1.22
PABPC1-203ENST00000517921 LINC00694P0DN24 101 aa7.42□□□□□ -1.22
PABPC1-203ENST00000517921 NANOS2P60321 138 aaKnown RBP7.42□□□□□ -1.22
PABPC1-203ENST00000517921 C11orf45Q8TAV5 145 aa7.42□□□□□ -1.22
PABPC1-203ENST00000517921 PRADC1Q9BSG0 188 aa7.42□□□□□ -1.22
PABPC1-203ENST00000517921 AP5S1Q9NUS5 200 aa7.42□□□□□ -1.22
PABPC1-203ENST00000517921 PRO0255Q9UI72 69 aa7.42□□□□□ -1.22
PABPC1-203ENST00000517921 HHLA3Q9XRX5 114 aa7.42□□□□□ -1.22
PABPC1-203ENST00000517921 TNFRSF18Q9Y5U5 241 aa7.42□□□□□ -1.22
PABPC1-203ENST00000517921 TRBV7-3A0A075B6L6 115 aa7.41□□□□□ -1.22
PABPC1-203ENST00000517921 GAGE12JA6NER3 117 aa7.41□□□□□ -1.22
PABPC1-203ENST00000517921 IFITM10A6NMD0 228 aa7.41□□□□□ -1.22
PABPC1-203ENST00000517921 F5H768 121 aa7.41□□□□□ -1.22
PABPC1-203ENST00000517921 HSBP1O75506 76 aa7.41□□□□□ -1.22
PABPC1-203ENST00000517921 HTN3P15516 51 aa7.41□□□□□ -1.22
PABPC1-203ENST00000517921 RPL36AP83881 106 aaKnown RBP7.41□□□□□ -1.22
PABPC1-203ENST00000517921 GAGE1Q13065 139 aa7.41□□□□□ -1.22
PABPC1-203ENST00000517921 GAGE4Q13068 117 aa7.41□□□□□ -1.22
PABPC1-203ENST00000517921 GAGE5Q13069 117 aa7.41□□□□□ -1.22
PABPC1-203ENST00000517921 GAGE13Q4V321 117 aa7.41□□□□□ -1.22
PABPC1-203ENST00000517921 PDZD11Q5EBL8 140 aa7.41□□□□□ -1.22
PABPC1-203ENST00000517921 ZNRF2Q8NHG8 242 aa7.41□□□□□ -1.22
PABPC1-203ENST00000517921 RPL36ALQ969Q0 106 aaKnown RBP7.41□□□□□ -1.22
PABPC1-203ENST00000517921 VSIG2Q96IQ7 327 aa7.41□□□□□ -1.22
PABPC1-203ENST00000517921 A0A096LNJ9 63 aa7.4□□□□□ -1.22
PABPC1-203ENST00000517921 IGHV1-24A0A0C4DH33 117 aa7.4□□□□□ -1.22
PABPC1-203ENST00000517921 VCYO14598 125 aa7.4□□□□□ -1.22
PABPC1-203ENST00000517921 TCAPO15273 167 aa7.4□□□□□ -1.22
PABPC1-203ENST00000517921 PAX4O43316 350 aa7.4□□□□□ -1.22
PABPC1-203ENST00000517921 GYPEP15421 78 aa7.4□□□□□ -1.22
PABPC1-203ENST00000517921 UBE2D3P61077 147 aa7.4□□□□□ -1.22
PABPC1-203ENST00000517921 UBE2D2P62837 147 aa7.4□□□□□ -1.22
PABPC1-203ENST00000517921 PMCHL1Q16048 86 aa7.4□□□□□ -1.22
PABPC1-203ENST00000517921 PHLDA1Q8WV24 401 aaPredicted RBP7.4□□□□□ -1.22
PABPC1-203ENST00000517921 TRAV26-1A0A087WT03 109 aa7.39□□□□□ -1.23
PABPC1-203ENST00000517921 IGHV3-38A0A0C4DH36 116 aa7.39□□□□□ -1.23
PABPC1-203ENST00000517921 A0A0J9YY99 117 aa7.39□□□□□ -1.23
PABPC1-203ENST00000517921 I3L3M4 83 aa7.39□□□□□ -1.23
PABPC1-203ENST00000517921 K7EMI3 77 aa7.39□□□□□ -1.23
PABPC1-203ENST00000517921 TSHBP01222 138 aa7.39□□□□□ -1.23
PABPC1-203ENST00000517921 AMTP48728 403 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 148.3 ms