RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 CYBAP13498 195 aa-4.78□□□□□ -3.17
RNU6-539P-201ENST00000516665 GALP22466 123 aa-4.78□□□□□ -3.17
RNU6-539P-201ENST00000516665 RPL35P42766 123 aaKnown RBP-4.78□□□□□ -3.17
RNU6-539P-201ENST00000516665 CCL18P55774 89 aa-4.78□□□□□ -3.17
RNU6-539P-201ENST00000516665 TMEM170BQ5T4T1 132 aa-4.78□□□□□ -3.17
RNU6-539P-201ENST00000516665 SPRR4Q96PI1 79 aa-4.78□□□□□ -3.17
RNU6-539P-201ENST00000516665 KIF27Q86VH2 1401 aa-4.79□□□□□ -3.18
RNU6-539P-201ENST00000516665 IGHV1-24A0A0C4DH33 117 aa-4.79□□□□□ -3.18
RNU6-539P-201ENST00000516665 PFDN6O15212 129 aa-4.79□□□□□ -3.18
RNU6-539P-201ENST00000516665 STAG3L3P0CL85 134 aa-4.79□□□□□ -3.18
RNU6-539P-201ENST00000516665 RPS12P25398 132 aaKnown RBP-4.79□□□□□ -3.18
RNU6-539P-201ENST00000516665 HEPN1Q6WQI6 88 aa-4.79□□□□□ -3.18
RNU6-539P-201ENST00000516665 MCEEQ96PE7 176 aa-4.79□□□□□ -3.18
RNU6-539P-201ENST00000516665 NDUFA4L2Q9NRX3 87 aa-4.79□□□□□ -3.18
RNU6-539P-201ENST00000516665 ARHGEF5Q12774 1597 aa-4.79□□□□□ -3.18
RNU6-539P-201ENST00000516665 MED21Q13503 144 aa-4.8□□□□□ -3.18
RNU6-539P-201ENST00000516665 SDHAF4Q5VUM1 108 aa-4.8□□□□□ -3.18
RNU6-539P-201ENST00000516665 MORN4Q8NDC4 146 aa-4.8□□□□□ -3.18
RNU6-539P-201ENST00000516665 OR51A4Q8NGJ6 313 aa-4.8□□□□□ -3.18
RNU6-539P-201ENST00000516665 AP3S1Q92572 193 aa-4.8□□□□□ -3.18
RNU6-539P-201ENST00000516665 CENPEQ02224 2701 aa-4.8□□□□□ -3.18
RNU6-539P-201ENST00000516665 ATAD2BQ9ULI0 1458 aa-4.81□□□□□ -3.18
RNU6-539P-201ENST00000516665 CTXND1A0A1B0GTU2 59 aa-4.81□□□□□ -3.18
RNU6-539P-201ENST00000516665 TRGC2P03986 189 aa-4.81□□□□□ -3.18
RNU6-539P-201ENST00000516665 TCL1AP56279 114 aa-4.81□□□□□ -3.18
RNU6-539P-201ENST00000516665 MAXP61244 160 aa-4.81□□□□□ -3.18
RNU6-539P-201ENST00000516665 TNNC1P63316 161 aa-4.81□□□□□ -3.18
RNU6-539P-201ENST00000516665 SMG6Q86US8 1419 aaKnown RBP-4.81□□□□□ -3.18
RNU6-539P-201ENST00000516665 PRDM2Q13029 1718 aa-4.82□□□□□ -3.18
RNU6-539P-201ENST00000516665 SMLR1H3BR10 107 aa-4.82□□□□□ -3.18
RNU6-539P-201ENST00000516665 SSNA1O43805 119 aa-4.82□□□□□ -3.18
RNU6-539P-201ENST00000516665 YPEL1O60688 119 aa-4.82□□□□□ -3.18
RNU6-539P-201ENST00000516665 SPCS3P61009 180 aa-4.82□□□□□ -3.18
RNU6-539P-201ENST00000516665 BLCAPP62952 87 aa-4.82□□□□□ -3.18
RNU6-539P-201ENST00000516665 KRTAP8-1Q8IUC2 63 aa-4.82□□□□□ -3.18
RNU6-539P-201ENST00000516665 PHB2Q99623 299 aa-4.82□□□□□ -3.18
RNU6-539P-201ENST00000516665 LSM5Q9Y4Y9 91 aaKnown RBP-4.82□□□□□ -3.18
RNU6-539P-201ENST00000516665 ABCC11Q96J66 1382 aa-4.82□□□□□ -3.18
RNU6-539P-201ENST00000516665 DLC1Q96QB1 1528 aa-4.82□□□□□ -3.18
RNU6-539P-201ENST00000516665 TGIF2-C20orf24A0A0A6YYL0 155 aa-4.83□□□□□ -3.18
RNU6-539P-201ENST00000516665 OCMP0CE72 109 aaPredicted RBP-4.83□□□□□ -3.18
RNU6-539P-201ENST00000516665 CCL2P13500 99 aa-4.83□□□□□ -3.18
RNU6-539P-201ENST00000516665 SLC25A26Q70HW3 274 aa-4.83□□□□□ -3.18
RNU6-539P-201ENST00000516665 AKAP14Q86UN6 197 aa-4.83□□□□□ -3.18
RNU6-539P-201ENST00000516665 OTOSQ8NHW6 89 aa-4.83□□□□□ -3.18
RNU6-539P-201ENST00000516665 CDKN2A-AS1Q9UH64 79 aa-4.83□□□□□ -3.18
RNU6-539P-201ENST00000516665 BZW2Q9Y6E2 419 aaKnown RBP-4.83□□□□□ -3.18
RNU6-539P-201ENST00000516665 CDC42BPAQ5VT25 1732 aa-4.83□□□□□ -3.18
RNU6-539P-201ENST00000516665 MUC22E2RYF6 1773 aaPredicted RBP-4.83□□□□□ -3.18
RNU6-539P-201ENST00000516665 MYH7P12883 1935 aa-4.84□□□□□ -3.18
RNU6-539P-201ENST00000516665 PIRTP0C851 137 aa-4.84□□□□□ -3.18
RNU6-539P-201ENST00000516665 UBE2D1P51668 147 aa-4.84□□□□□ -3.18
RNU6-539P-201ENST00000516665 ST13P4Q8IZP2 240 aaPredicted RBP-4.84□□□□□ -3.18
RNU6-539P-201ENST00000516665 OTUD6BQ8N6M0 293 aa-4.84□□□□□ -3.18
RNU6-539P-201ENST00000516665 MRPL34Q9BQ48 92 aaKnown RBP-4.84□□□□□ -3.18
RNU6-539P-201ENST00000516665 DMDP11532 3685 aa-4.85□□□□□ -3.19
RNU6-539P-201ENST00000516665 CD109Q6YHK3 1445 aa-4.85□□□□□ -3.19
RNU6-539P-201ENST00000516665 IFNA7P01567 189 aa-4.85□□□□□ -3.19
RNU6-539P-201ENST00000516665 OMPP47874 163 aa-4.85□□□□□ -3.19
RNU6-539P-201ENST00000516665 COTL1Q14019 142 aa-4.85□□□□□ -3.19
RNU6-539P-201ENST00000516665 CCDC124Q96CT7 223 aaKnown RBP-4.85□□□□□ -3.19
RNU6-539P-201ENST00000516665 DCUN1D1Q96GG9 259 aa-4.85□□□□□ -3.19
RNU6-539P-201ENST00000516665 LRTM1Q9HBL6 345 aa-4.85□□□□□ -3.19
RNU6-539P-201ENST00000516665 SPEGQ15772 3267 aa-4.86□□□□□ -3.19
RNU6-539P-201ENST00000516665 CCDC171Q6TFL3 1326 aa-4.86□□□□□ -3.19
RNU6-539P-201ENST00000516665 TRAV30A0A087WSZ9 112 aa-4.86□□□□□ -3.19
RNU6-539P-201ENST00000516665 KPNA4O00629 521 aaPredicted RBP-4.86□□□□□ -3.19
RNU6-539P-201ENST00000516665 CHP2O43745 196 aa-4.86□□□□□ -3.19
RNU6-539P-201ENST00000516665 RPS17P08708 135 aaKnown RBP-4.86□□□□□ -3.19
RNU6-539P-201ENST00000516665 CKS2P33552 79 aa-4.86□□□□□ -3.19
RNU6-539P-201ENST00000516665 COX17Q14061 63 aa-4.86□□□□□ -3.19
RNU6-539P-201ENST00000516665 NKAIN1Q4KMZ8 207 aa-4.86□□□□□ -3.19
RNU6-539P-201ENST00000516665 AKR1C8PQ5T2L2 129 aa-4.86□□□□□ -3.19
RNU6-539P-201ENST00000516665 WFDC9Q8NEX5 89 aa-4.86□□□□□ -3.19
RNU6-539P-201ENST00000516665 OR5H6Q8NGV6 325 aa-4.86□□□□□ -3.19
RNU6-539P-201ENST00000516665 C8orf76Q96K31 380 aa-4.86□□□□□ -3.19
RNU6-539P-201ENST00000516665 LRRC37A3O60309 1634 aa-4.86□□□□□ -3.19
RNU6-539P-201ENST00000516665 MYH8P13535 1937 aa-4.87□□□□□ -3.19
RNU6-539P-201ENST00000516665 TRAV2A0A0B4J234 112 aa-4.87□□□□□ -3.19
RNU6-539P-201ENST00000516665 F8VZ95 297 aa-4.87□□□□□ -3.19
RNU6-539P-201ENST00000516665 NEFHP12036 1026 aa-4.87□□□□□ -3.19
RNU6-539P-201ENST00000516665 PARVBQ9HBI1 364 aa-4.87□□□□□ -3.19
RNU6-539P-201ENST00000516665 I3L3M4 83 aa-4.88□□□□□ -3.19
RNU6-539P-201ENST00000516665 PET100P0DJ07 73 aa-4.88□□□□□ -3.19
RNU6-539P-201ENST00000516665 CMPK1P30085 196 aa-4.88□□□□□ -3.19
RNU6-539P-201ENST00000516665 LCN1P31025 176 aa-4.88□□□□□ -3.19
RNU6-539P-201ENST00000516665 TAS2R8Q9NYW2 309 aa-4.88□□□□□ -3.19
RNU6-539P-201ENST00000516665 IL20Q9NYY1 176 aa-4.88□□□□□ -3.19
RNU6-539P-201ENST00000516665 ALKQ9UM73 1620 aa-4.88□□□□□ -3.19
RNU6-539P-201ENST00000516665 YTHDC2Q9H6S0 1430 aaKnown RBP-4.89□□□□□ -3.19
RNU6-539P-201ENST00000516665 MAP1LC3B2A6NCE7 125 aa-4.89□□□□□ -3.19
RNU6-539P-201ENST00000516665 H7BZZ5 65 aa-4.89□□□□□ -3.19
RNU6-539P-201ENST00000516665 IFNA14P01570 189 aa-4.89□□□□□ -3.19
RNU6-539P-201ENST00000516665 S100A5P33763 92 aa-4.89□□□□□ -3.19
RNU6-539P-201ENST00000516665 BLVRAP53004 296 aa-4.89□□□□□ -3.19
RNU6-539P-201ENST00000516665 CARD18P57730 90 aa-4.89□□□□□ -3.19
RNU6-539P-201ENST00000516665 CDC37Q16543 378 aaPredicted RBP-4.89□□□□□ -3.19
RNU6-539P-201ENST00000516665 TCOF1Q13428 1488 aaKnown RBP-4.89□□□□□ -3.19
RNU6-539P-201ENST00000516665 TRAV16A0A0A6YYK6 109 aaPredicted RBP-4.9□□□□□ -3.19
RNU6-539P-201ENST00000516665 BANF1O75531 89 aa-4.9□□□□□ -3.19
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms