RNA–Protein interactions for RNA: ENST00000516259.1

RNU6-390P-201, Transcript of RNA, U6 small nuclear 390, pseudogene, humanhuman

BASIC

Gene RNU6-390P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-390P-201ENST00000516259 TRBV10-3A0A0K0K1G6 114 aa0.34□□□□□ -2.36
RNU6-390P-201ENST00000516259 SSC5DA1L4H1 1573 aa0.34□□□□□ -2.36
RNU6-390P-201ENST00000516259 PHGR1C9JFL3 82 aa0.34□□□□□ -2.36
RNU6-390P-201ENST00000516259 EDDM3BP56851 147 aa0.34□□□□□ -2.36
RNU6-390P-201ENST00000516259 C12orf73Q69YU5 71 aa0.34□□□□□ -2.36
RNU6-390P-201ENST00000516259 C10orf82Q8WW14 230 aa0.34□□□□□ -2.36
RNU6-390P-201ENST00000516259 ARL11Q969Q4 196 aa0.34□□□□□ -2.36
RNU6-390P-201ENST00000516259 USP24Q9UPU5 2620 aa0.34□□□□□ -2.36
RNU6-390P-201ENST00000516259 MED13LQ71F56 2210 aa0.33□□□□□ -2.36
RNU6-390P-201ENST00000516259 SIPA1L3O60292 1781 aaPredicted RBP0.33□□□□□ -2.36
RNU6-390P-201ENST00000516259 SPAARA0A1B0GVQ0 90 aa0.33□□□□□ -2.36
RNU6-390P-201ENST00000516259 APOC4-APOC2K7ER74 178 aa0.33□□□□□ -2.36
RNU6-390P-201ENST00000516259 UBE2G1P62253 170 aa0.33□□□□□ -2.36
RNU6-390P-201ENST00000516259 INSL4Q14641 139 aa0.33□□□□□ -2.36
RNU6-390P-201ENST00000516259 WFDC6Q9BQY6 131 aa0.33□□□□□ -2.36
RNU6-390P-201ENST00000516259 NAV2Q8IVL1 2488 aa0.32□□□□□ -2.36
RNU6-390P-201ENST00000516259 ARFGEF1Q9Y6D6 1849 aa0.32□□□□□ -2.36
RNU6-390P-201ENST00000516259 PIGBOS1A0A0B4J2F0 54 aa0.32□□□□□ -2.36
RNU6-390P-201ENST00000516259 TMEM14DPA8MWL7 114 aa0.32□□□□□ -2.36
RNU6-390P-201ENST00000516259 SNCGO76070 127 aa0.32□□□□□ -2.36
RNU6-390P-201ENST00000516259 TSC22D3Q99576 134 aa0.32□□□□□ -2.36
RNU6-390P-201ENST00000516259 RERGLQ9H628 205 aa0.32□□□□□ -2.36
RNU6-390P-201ENST00000516259 CACNA1HO95180 2353 aa0.32□□□□□ -2.36
RNU6-390P-201ENST00000516259 NAIPQ13075 1403 aa0.31□□□□□ -2.36
RNU6-390P-201ENST00000516259 SIX6O95475 246 aa0.31□□□□□ -2.36
RNU6-390P-201ENST00000516259 Q6AWC8 147 aa0.31□□□□□ -2.36
RNU6-390P-201ENST00000516259 AGPAT4-IT1Q9H0P7 198 aa0.31□□□□□ -2.36
RNU6-390P-201ENST00000516259 TNCP24821 2201 aa0.31□□□□□ -2.36
RNU6-390P-201ENST00000516259 MYH8P13535 1937 aa0.3□□□□□ -2.36
RNU6-390P-201ENST00000516259 TTC28Q96AY4 2481 aa0.3□□□□□ -2.36
RNU6-390P-201ENST00000516259 F5P12259 2224 aa0.3□□□□□ -2.36
RNU6-390P-201ENST00000516259 MUC5ACP98088 5654 aa0.3□□□□□ -2.36
RNU6-390P-201ENST00000516259 EFCAB10A6NFE3 127 aa0.3□□□□□ -2.36
RNU6-390P-201ENST00000516259 ACYP2P14621 99 aa0.3□□□□□ -2.36
RNU6-390P-201ENST00000516259 FGF7P21781 194 aa0.3□□□□□ -2.36
RNU6-390P-201ENST00000516259 Q6ZRX8 168 aa0.3□□□□□ -2.36
RNU6-390P-201ENST00000516259 SERP1Q9Y6X1 66 aa0.3□□□□□ -2.36
RNU6-390P-201ENST00000516259 NWD2Q9ULI1 1742 aa0.3□□□□□ -2.36
RNU6-390P-201ENST00000516259 CASKIN1Q8WXD9 1431 aa0.3□□□□□ -2.36
RNU6-390P-201ENST00000516259 MDN1Q9NU22 5596 aa0.3□□□□□ -2.36
RNU6-390P-201ENST00000516259 PIEZO1Q92508 2521 aa0.29□□□□□ -2.36
RNU6-390P-201ENST00000516259 MYH9P35579 1960 aaKnown RBP0.29□□□□□ -2.36
RNU6-390P-201ENST00000516259 TRGV1A0A0A0MS02 117 aa0.29□□□□□ -2.36
RNU6-390P-201ENST00000516259 PDCD10Q9BUL8 212 aa0.29□□□□□ -2.36
RNU6-390P-201ENST00000516259 NAA60Q9H7X0 242 aa0.29□□□□□ -2.36
RNU6-390P-201ENST00000516259 PIN1P1O15428 100 aa0.28□□□□□ -2.36
RNU6-390P-201ENST00000516259 TPRP12270 2363 aaKnown RBP0.28□□□□□ -2.36
RNU6-390P-201ENST00000516259 MYH7P12883 1935 aa0.28□□□□□ -2.36
RNU6-390P-201ENST00000516259 ABCA12Q86UK0 2595 aa0.28□□□□□ -2.37
RNU6-390P-201ENST00000516259 MBD5Q9P267 1494 aa0.28□□□□□ -2.37
RNU6-390P-201ENST00000516259 PHLPP1O60346 1717 aa0.27□□□□□ -2.37
RNU6-390P-201ENST00000516259 NMBP08949 121 aa0.27□□□□□ -2.37
RNU6-390P-201ENST00000516259 SARNPP82979 210 aaKnown RBP0.27□□□□□ -2.37
RNU6-390P-201ENST00000516259 COX6A2Q02221 97 aa0.27□□□□□ -2.37
RNU6-390P-201ENST00000516259 Q8N8P6 123 aa0.27□□□□□ -2.37
RNU6-390P-201ENST00000516259 SPTSSBQ8NFR3 76 aa0.27□□□□□ -2.37
RNU6-390P-201ENST00000516259 SEC11CQ9BY50 192 aa0.27□□□□□ -2.37
RNU6-390P-201ENST00000516259 FAM107BQ9H098 131 aa0.27□□□□□ -2.37
RNU6-390P-201ENST00000516259 LINC00312Q9Y6C7 94 aa0.27□□□□□ -2.37
RNU6-390P-201ENST00000516259 MYO7AQ13402 2215 aa0.27□□□□□ -2.37
RNU6-390P-201ENST00000516259 GOLGA3Q08378 1498 aa0.27□□□□□ -2.37
RNU6-390P-201ENST00000516259 HIST1H1DP16402 221 aaKnown RBP0.26□□□□□ -2.37
RNU6-390P-201ENST00000516259 GCHFRP30047 84 aa0.26□□□□□ -2.37
RNU6-390P-201ENST00000516259 BAGE3Q86Y29 109 aa0.26□□□□□ -2.37
RNU6-390P-201ENST00000516259 CADP27708 2225 aa0.26□□□□□ -2.37
RNU6-390P-201ENST00000516259 POLQO75417 2590 aa0.26□□□□□ -2.37
RNU6-390P-201ENST00000516259 MAST4O15021 2626 aa0.25□□□□□ -2.37
RNU6-390P-201ENST00000516259 ZMYM4Q5VZL5 1548 aa0.25□□□□□ -2.37
RNU6-390P-201ENST00000516259 TRAV13-2A0A0B4J235 113 aa0.25□□□□□ -2.37
RNU6-390P-201ENST00000516259 FAM25AB3EWG3 89 aa0.25□□□□□ -2.37
RNU6-390P-201ENST00000516259 FAM25CB3EWG5 89 aa0.25□□□□□ -2.37
RNU6-390P-201ENST00000516259 FAM25GB3EWG6 89 aa0.25□□□□□ -2.37
RNU6-390P-201ENST00000516259 HCG22E2RYF7 251 aa0.25□□□□□ -2.37
RNU6-390P-201ENST00000516259 G3V318 75 aa0.25□□□□□ -2.37
RNU6-390P-201ENST00000516259 GNG7O60262 68 aa0.25□□□□□ -2.37
RNU6-390P-201ENST00000516259 CCL18P55774 89 aa0.25□□□□□ -2.37
RNU6-390P-201ENST00000516259 MEIG1Q5JSS6 88 aa0.25□□□□□ -2.37
RNU6-390P-201ENST00000516259 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.25□□□□□ -2.37
RNU6-390P-201ENST00000516259 LSM10Q969L4 123 aaKnown RBP0.25□□□□□ -2.37
RNU6-390P-201ENST00000516259 PRDM2Q13029 1718 aa0.24□□□□□ -2.37
RNU6-390P-201ENST00000516259 PTPRZ1P23471 2315 aaPredicted RBP0.24□□□□□ -2.37
RNU6-390P-201ENST00000516259 TRAV1-2A0A0B4J238 106 aa0.24□□□□□ -2.37
RNU6-390P-201ENST00000516259 SMIM6P0DI80 62 aa0.24□□□□□ -2.37
RNU6-390P-201ENST00000516259 Q56UQ5 140 aa0.24□□□□□ -2.37
RNU6-390P-201ENST00000516259 LENEPQ9Y5L5 61 aa0.24□□□□□ -2.37
RNU6-390P-201ENST00000516259 SYNE1Q8NF91 8797 aaKnown RBP0.24□□□□□ -2.37
RNU6-390P-201ENST00000516259 KMT2DO14686 5537 aa0.24□□□□□ -2.37
RNU6-390P-201ENST00000516259 FOCADQ5VW36 1801 aa0.24□□□□□ -2.37
RNU6-390P-201ENST00000516259 DOCK2Q92608 1830 aa0.24□□□□□ -2.37
RNU6-390P-201ENST00000516259 ZFYVE26Q68DK2 2539 aa0.24□□□□□ -2.37
RNU6-390P-201ENST00000516259 IFT172Q9UG01 1749 aa0.24□□□□□ -2.37
RNU6-390P-201ENST00000516259 A2ML1A8K2U0 1454 aa0.23□□□□□ -2.37
RNU6-390P-201ENST00000516259 PPIP5K1Q6PFW1 1433 aa0.23□□□□□ -2.37
RNU6-390P-201ENST00000516259 Q5BKY6 102 aa0.23□□□□□ -2.37
RNU6-390P-201ENST00000516259 S100A7L2Q5SY68 101 aa0.23□□□□□ -2.37
RNU6-390P-201ENST00000516259 PPP3R2Q96LZ3 170 aa0.23□□□□□ -2.37
RNU6-390P-201ENST00000516259 AQP10Q96PS8 301 aa0.23□□□□□ -2.37
RNU6-390P-201ENST00000516259 ZNF609O15014 1411 aa0.22□□□□□ -2.37
RNU6-390P-201ENST00000516259 PATJQ8NI35 1801 aa0.22□□□□□ -2.37
RNU6-390P-201ENST00000516259 IGF2RP11717 2491 aa0.22□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms