RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 TMSB15BA0A087X1C1 80 aa7.11□□□□□ -1.27
RNF4-218ENST00000513284 PFDN1O60925 122 aa7.11□□□□□ -1.27
RNF4-218ENST00000513284 RAB4BP61018 213 aa7.11□□□□□ -1.27
RNF4-218ENST00000513284 UBE2D3P61077 147 aa7.11□□□□□ -1.27
RNF4-218ENST00000513284 UBE2D2P62837 147 aa7.11□□□□□ -1.27
RNF4-218ENST00000513284 ZNF56Q15929 161 aa7.11□□□□□ -1.27
RNF4-218ENST00000513284 ATRAIDQ6UW56 229 aa7.11□□□□□ -1.27
RNF4-218ENST00000513284 C9orf163Q8N9P6 203 aa7.11□□□□□ -1.27
RNF4-218ENST00000513284 TRBV6-8A0A0A6YYG3 113 aa7.1□□□□□ -1.27
RNF4-218ENST00000513284 LTAP01374 205 aa7.1□□□□□ -1.27
RNF4-218ENST00000513284 CXCL1P09341 107 aa7.1□□□□□ -1.27
RNF4-218ENST00000513284 OR10G8Q8NGN5 311 aa7.1□□□□□ -1.27
RNF4-218ENST00000513284 MBD3L1Q8WWY6 194 aa7.1□□□□□ -1.27
RNF4-218ENST00000513284 ZNF471Q9BX82 626 aaPredicted RBP7.1□□□□□ -1.27
RNF4-218ENST00000513284 A0A0D9SG52 128 aa7.09□□□□□ -1.27
RNF4-218ENST00000513284 ANGP03950 147 aaKnown RBP7.09□□□□□ -1.27
RNF4-218ENST00000513284 PRSS1P07477 247 aa7.09□□□□□ -1.27
RNF4-218ENST00000513284 SMIM17P0DL12 118 aa7.09□□□□□ -1.27
RNF4-218ENST00000513284 SPANXN1Q5VSR9 72 aa7.09□□□□□ -1.27
RNF4-218ENST00000513284 UMAD1C9J7I0 102 aa7.08□□□□□ -1.28
RNF4-218ENST00000513284 CIRBPQ14011 172 aaKnown RBP7.08□□□□□ -1.28
RNF4-218ENST00000513284 MIAQ16674 131 aa7.08□□□□□ -1.28
RNF4-218ENST00000513284 C15orf54Q8N8G6 183 aa7.08□□□□□ -1.28
RNF4-218ENST00000513284 SFT2D1Q8WV19 159 aa7.08□□□□□ -1.28
RNF4-218ENST00000513284 CHCHD5Q9BSY4 110 aa7.08□□□□□ -1.28
RNF4-218ENST00000513284 A0A0J9YXV3 536 aa7.07□□□□□ -1.28
RNF4-218ENST00000513284 F5H697 171 aa7.07□□□□□ -1.28
RNF4-218ENST00000513284 BCL2L11O43521 198 aa7.07□□□□□ -1.28
RNF4-218ENST00000513284 PAGE4O60829 102 aa7.07□□□□□ -1.28
RNF4-218ENST00000513284 DGAT2L7PQ6IED9 249 aa7.07□□□□□ -1.28
RNF4-218ENST00000513284 ENHOQ6UWT2 76 aa7.07□□□□□ -1.28
RNF4-218ENST00000513284 BAGE2Q86Y30 109 aa7.07□□□□□ -1.28
RNF4-218ENST00000513284 NEXN-AS1Q8NBZ9 246 aa7.07□□□□□ -1.28
RNF4-218ENST00000513284 FAM213BQ8TBF2 198 aa7.07□□□□□ -1.28
RNF4-218ENST00000513284 TRBV25-1A0A075B6N4 114 aa7.06□□□□□ -1.28
RNF4-218ENST00000513284 KANTRA0A1W2PQU2 76 aa7.06□□□□□ -1.28
RNF4-218ENST00000513284 USP17L23D6RBM5 183 aa7.06□□□□□ -1.28
RNF4-218ENST00000513284 HLA-DQA1P01909 254 aa7.06□□□□□ -1.28
RNF4-218ENST00000513284 OR5AL1P0C617 328 aa7.06□□□□□ -1.28
RNF4-218ENST00000513284 EIF5AP63241 154 aaKnown RBP7.06□□□□□ -1.28
RNF4-218ENST00000513284 MPV17L2Q567V2 206 aa7.06□□□□□ -1.28
RNF4-218ENST00000513284 TMUB2Q71RG4 321 aa7.06□□□□□ -1.28
RNF4-218ENST00000513284 AP1S3Q96PC3 154 aa7.06□□□□□ -1.28
RNF4-218ENST00000513284 A0A1B0GV50 99 aa7.05□□□□□ -1.28
RNF4-218ENST00000513284 H7C1H1 209 aa7.05□□□□□ -1.28
RNF4-218ENST00000513284 SNAI2O43623 268 aa7.05□□□□□ -1.28
RNF4-218ENST00000513284 PRR27Q6MZM9 219 aa7.05□□□□□ -1.28
RNF4-218ENST00000513284 OR10AG1Q8NH19 301 aa7.05□□□□□ -1.28
RNF4-218ENST00000513284 MLST8Q9BVC4 326 aa7.05□□□□□ -1.28
RNF4-218ENST00000513284 DPH3P1Q9H4G8 78 aa7.05□□□□□ -1.28
RNF4-218ENST00000513284 A0A087WYN8 130 aa7.04□□□□□ -1.28
RNF4-218ENST00000513284 H2AFB1P0C5Y9 115 aa7.04□□□□□ -1.28
RNF4-218ENST00000513284 CCL20P78556 96 aa7.04□□□□□ -1.28
RNF4-218ENST00000513284 RPL19P84098 196 aaKnown RBP7.04□□□□□ -1.28
RNF4-218ENST00000513284 LCE2AQ5TA79 106 aaPredicted RBP7.04□□□□□ -1.28
RNF4-218ENST00000513284 CLRN3Q8NCR9 226 aa7.04□□□□□ -1.28
RNF4-218ENST00000513284 DERL1Q9BUN8 251 aa7.04□□□□□ -1.28
RNF4-218ENST00000513284 SSBP4Q9BWG4 385 aaPredicted RBP7.04□□□□□ -1.28
RNF4-218ENST00000513284 VAX2Q9UIW0 290 aa7.04□□□□□ -1.28
RNF4-218ENST00000513284 IGHV1-24A0A0C4DH33 117 aa7.03□□□□□ -1.28
RNF4-218ENST00000513284 SCO2A0A1W2PP80 73 aa7.03□□□□□ -1.28
RNF4-218ENST00000513284 XKRY2A2RUG3 117 aa7.03□□□□□ -1.28
RNF4-218ENST00000513284 TEX46H3BTG2 121 aa7.03□□□□□ -1.28
RNF4-218ENST00000513284 PHOX2AO14813 284 aa7.03□□□□□ -1.28
RNF4-218ENST00000513284 CHTF8P0CG12 524 aa7.03□□□□□ -1.28
RNF4-218ENST00000513284 RPS20P60866 119 aaKnown RBP7.03□□□□□ -1.28
RNF4-218ENST00000513284 KRTAP26-1Q6PEX3 210 aa7.03□□□□□ -1.28
RNF4-218ENST00000513284 TRAV1-1A0A0B4J248 108 aa7.02□□□□□ -1.29
RNF4-218ENST00000513284 SLPIP03973 132 aa7.02□□□□□ -1.29
RNF4-218ENST00000513284 CACNG7P62955 275 aa7.02□□□□□ -1.29
RNF4-218ENST00000513284 GAGE6Q13070 117 aa7.02□□□□□ -1.29
RNF4-218ENST00000513284 AP5S1Q9NUS5 200 aa7.02□□□□□ -1.29
RNF4-218ENST00000513284 PRR34Q9NV39 138 aa7.02□□□□□ -1.29
RNF4-218ENST00000513284 KIF25-AS1Q9Y6Z4 181 aa7.02□□□□□ -1.29
RNF4-218ENST00000513284 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.01□□□□□ -1.29
RNF4-218ENST00000513284 TRAV8-4A0A0B4J246 113 aa7.01□□□□□ -1.29
RNF4-218ENST00000513284 P01737 135 aa7.01□□□□□ -1.29
RNF4-218ENST00000513284 MGPP08493 103 aa7.01□□□□□ -1.29
RNF4-218ENST00000513284 GZMBP10144 247 aa7.01□□□□□ -1.29
RNF4-218ENST00000513284 SSTP61278 116 aa7.01□□□□□ -1.29
RNF4-218ENST00000513284 RBX1P62877 108 aa7.01□□□□□ -1.29
RNF4-218ENST00000513284 IQCJQ1A5X6 159 aa7.01□□□□□ -1.29
RNF4-218ENST00000513284 WDR73Q6P4I2 378 aa7.01□□□□□ -1.29
RNF4-218ENST00000513284 TCTE3Q8IZS6 198 aa7.01□□□□□ -1.29
RNF4-218ENST00000513284 LINC00269Q8N2A0 174 aa7.01□□□□□ -1.29
RNF4-218ENST00000513284 MANBALQ9NQG1 85 aa7.01□□□□□ -1.29
RNF4-218ENST00000513284 BIN3Q9NQY0 253 aa7.01□□□□□ -1.29
RNF4-218ENST00000513284 UBE2L6O14933 153 aa7□□□□□ -1.29
RNF4-218ENST00000513284 TRGC1P0CF51 173 aa7□□□□□ -1.29
RNF4-218ENST00000513284 RPL35P42766 123 aaKnown RBP7□□□□□ -1.29
RNF4-218ENST00000513284 RAB5CP51148 216 aa7□□□□□ -1.29
RNF4-218ENST00000513284 REG3AQ06141 175 aa7□□□□□ -1.29
RNF4-218ENST00000513284 CLPSL2Q6UWE3 100 aa7□□□□□ -1.29
RNF4-218ENST00000513284 Q6ZNX1 250 aa7□□□□□ -1.29
RNF4-218ENST00000513284 FER1L6-AS1Q8NA97 138 aa7□□□□□ -1.29
RNF4-218ENST00000513284 SMIM12Q96EX1 92 aa7□□□□□ -1.29
RNF4-218ENST00000513284 TPPP3Q9BW30 176 aa7□□□□□ -1.29
RNF4-218ENST00000513284 PLAC8Q9NZF1 115 aa7□□□□□ -1.29
RNF4-218ENST00000513284 MUC21A0A0G2JKD1 596 aa6.99□□□□□ -1.29
RNF4-218ENST00000513284 MUC21A0A140T8X8 626 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms