RNA–Protein interactions for RNA: ENST00000511421.5

SH3RF1-205, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 1,657 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-205ENST00000511421 DAZ3Q9NR90 486 aaKnown RBP7.76□□□□□ -1.17
SH3RF1-205ENST00000511421 F2Z2F3 143 aa7.76□□□□□ -1.17
SH3RF1-205ENST00000511421 F5H697 171 aa7.76□□□□□ -1.17
SH3RF1-205ENST00000511421 SMIM17P0DL12 118 aa7.76□□□□□ -1.17
SH3RF1-205ENST00000511421 LYZL1Q6UWQ5 148 aa7.76□□□□□ -1.17
SH3RF1-205ENST00000511421 KRTAP17-1Q9BYP8 105 aa7.76□□□□□ -1.17
SH3RF1-205ENST00000511421 RNASE7Q9H1E1 156 aaKnown RBP7.76□□□□□ -1.17
SH3RF1-205ENST00000511421 CTRLP40313 264 aa7.75□□□□□ -1.17
SH3RF1-205ENST00000511421 TOR2AQ5JU69 321 aa7.75□□□□□ -1.17
SH3RF1-205ENST00000511421 CDPF1Q6NVV7 123 aa7.75□□□□□ -1.17
SH3RF1-205ENST00000511421 WDR73Q6P4I2 378 aa7.75□□□□□ -1.17
SH3RF1-205ENST00000511421 RPP21Q9H633 154 aaKnown RBP7.75□□□□□ -1.17
SH3RF1-205ENST00000511421 M0QY20 66 aa7.74□□□□□ -1.17
SH3RF1-205ENST00000511421 PSCAO43653 123 aa7.74□□□□□ -1.17
SH3RF1-205ENST00000511421 NDUFS6O75380 124 aaKnown RBP7.74□□□□□ -1.17
SH3RF1-205ENST00000511421 CNFNQ9BYD5 112 aa7.74□□□□□ -1.17
SH3RF1-205ENST00000511421 TRBV6-8A0A0A6YYG3 113 aa7.73□□□□□ -1.17
SH3RF1-205ENST00000511421 TRAV8-3A0A0A6YYJ7 113 aa7.73□□□□□ -1.17
SH3RF1-205ENST00000511421 NTF3P20783 257 aa7.73□□□□□ -1.17
SH3RF1-205ENST00000511421 EIF5A2Q9GZV4 153 aaKnown RBP7.73□□□□□ -1.17
SH3RF1-205ENST00000511421 MGPP08493 103 aa7.73□□□□□ -1.17
SH3RF1-205ENST00000511421 SUMO4Q6EEV6 95 aa7.73□□□□□ -1.17
SH3RF1-205ENST00000511421 FAM231DQ6ZW35 169 aa7.73□□□□□ -1.17
SH3RF1-205ENST00000511421 GTSF1Q8WW33 167 aa7.73□□□□□ -1.17
SH3RF1-205ENST00000511421 DNAJC30Q96LL9 226 aa7.73□□□□□ -1.17
SH3RF1-205ENST00000511421 CHCHD7Q9BUK0 85 aa7.73□□□□□ -1.17
SH3RF1-205ENST00000511421 TM2D2Q9BX73 214 aa7.73□□□□□ -1.17
SH3RF1-205ENST00000511421 URGCP-MRPS24S4R325 110 aa7.73□□□□□ -1.17
SH3RF1-205ENST00000511421 SRP19P09132 144 aaKnown RBP7.72□□□□□ -1.17
SH3RF1-205ENST00000511421 TRGC1P0CF51 173 aa7.72□□□□□ -1.17
SH3RF1-205ENST00000511421 CEBPGP53567 150 aa7.72□□□□□ -1.17
SH3RF1-205ENST00000511421 CFAP161Q6P656 301 aa7.72□□□□□ -1.17
SH3RF1-205ENST00000511421 NTM-AS1Q6ZSK4 140 aa7.72□□□□□ -1.17
SH3RF1-205ENST00000511421 KRTAP4-5Q9BYR2 181 aa7.72□□□□□ -1.17
SH3RF1-205ENST00000511421 KLK12Q9UKR0 248 aa7.72□□□□□ -1.17
SH3RF1-205ENST00000511421 A0A087WX48 190 aa7.71□□□□□ -1.18
SH3RF1-205ENST00000511421 GATCO43716 136 aaKnown RBP7.71□□□□□ -1.18
SH3RF1-205ENST00000511421 SLC7A5P1Q8MH63 180 aa7.71□□□□□ -1.18
SH3RF1-205ENST00000511421 MAPKAPK5-AS1Q8N8E1 139 aa7.71□□□□□ -1.18
SH3RF1-205ENST00000511421 SMIM7Q9BQ49 75 aa7.71□□□□□ -1.18
SH3RF1-205ENST00000511421 DPH3P1Q9H4G8 78 aa7.71□□□□□ -1.18
SH3RF1-205ENST00000511421 H7C1H1 209 aa7.7□□□□□ -1.18
SH3RF1-205ENST00000511421 KRTAP10-1P60331 282 aa7.7□□□□□ -1.18
SH3RF1-205ENST00000511421 WFDC2Q14508 124 aa7.7□□□□□ -1.18
SH3RF1-205ENST00000511421 TWIST1Q15672 202 aa7.7□□□□□ -1.18
SH3RF1-205ENST00000511421 TMEM97Q5BJF2 176 aa7.7□□□□□ -1.18
SH3RF1-205ENST00000511421 LINC01551Q86U37 167 aa7.7□□□□□ -1.18
SH3RF1-205ENST00000511421 Q8N814 137 aa7.7□□□□□ -1.18
SH3RF1-205ENST00000511421 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.7□□□□□ -1.18
SH3RF1-205ENST00000511421 TMEM262E9PQX1 116 aa7.7□□□□□ -1.18
SH3RF1-205ENST00000511421 ELOBQ15370 118 aa7.7□□□□□ -1.18
SH3RF1-205ENST00000511421 MPV17L2Q567V2 206 aa7.7□□□□□ -1.18
SH3RF1-205ENST00000511421 CT83Q5H943 113 aa7.7□□□□□ -1.18
SH3RF1-205ENST00000511421 RASL11AQ6T310 242 aa7.7□□□□□ -1.18
SH3RF1-205ENST00000511421 TEX261Q6UWH6 196 aa7.7□□□□□ -1.18
SH3RF1-205ENST00000511421 PCLOQ9Y6V0 5065 aa7.69□□□□□ -1.18
SH3RF1-205ENST00000511421 ZNF727A8MUV8 499 aa7.69□□□□□ -1.18
SH3RF1-205ENST00000511421 A8MWL6 223 aa7.69□□□□□ -1.18
SH3RF1-205ENST00000511421 FOXA3P55318 350 aaPredicted RBP7.69□□□□□ -1.18
SH3RF1-205ENST00000511421 KCNIP4Q6PIL6 250 aa7.69□□□□□ -1.18
SH3RF1-205ENST00000511421 ATRAIDQ6UW56 229 aa7.69□□□□□ -1.18
SH3RF1-205ENST00000511421 NTN5Q8WTR8 489 aaPredicted RBP7.69□□□□□ -1.18
SH3RF1-205ENST00000511421 UBE2WQ96B02 151 aa7.69□□□□□ -1.18
SH3RF1-205ENST00000511421 CHCHD5Q9BSY4 110 aa7.69□□□□□ -1.18
SH3RF1-205ENST00000511421 ABCA13Q86UQ4 5058 aa7.69□□□□□ -1.18
SH3RF1-205ENST00000511421 C9JQL5 133 aa7.68□□□□□ -1.18
SH3RF1-205ENST00000511421 GCSHP23434 173 aa7.68□□□□□ -1.18
SH3RF1-205ENST00000511421 CTAG1AP78358 180 aa7.68□□□□□ -1.18
SH3RF1-205ENST00000511421 IQCJQ1A5X6 159 aa7.68□□□□□ -1.18
SH3RF1-205ENST00000511421 NIT2Q9NQR4 276 aa7.68□□□□□ -1.18
SH3RF1-205ENST00000511421 COX11Q9Y6N1 276 aa7.68□□□□□ -1.18
SH3RF1-205ENST00000511421 DNAH8Q96JB1 4490 aa7.68□□□□□ -1.18
SH3RF1-205ENST00000511421 TRBV25-1A0A075B6N4 114 aa7.67□□□□□ -1.18
SH3RF1-205ENST00000511421 IGKV2D-24A0A075B6R9 120 aa7.67□□□□□ -1.18
SH3RF1-205ENST00000511421 IGLV5-52A0A0A0MRZ9 124 aa7.67□□□□□ -1.18
SH3RF1-205ENST00000511421 XGP55808 180 aa7.67□□□□□ -1.18
SH3RF1-205ENST00000511421 ENHOQ6UWT2 76 aa7.67□□□□□ -1.18
SH3RF1-205ENST00000511421 C15orf54Q8N8G6 183 aa7.67□□□□□ -1.18
SH3RF1-205ENST00000511421 GATD1Q8NB37 220 aa7.67□□□□□ -1.18
SH3RF1-205ENST00000511421 RMI2Q96E14 147 aa7.67□□□□□ -1.18
SH3RF1-205ENST00000511421 PGLYRP4Q96LB8 373 aa7.67□□□□□ -1.18
SH3RF1-205ENST00000511421 OSTCQ9NRP0 149 aa7.67□□□□□ -1.18
SH3RF1-205ENST00000511421 LECT2O14960 151 aa7.67□□□□□ -1.18
SH3RF1-205ENST00000511421 PKIAP61925 76 aa7.67□□□□□ -1.18
SH3RF1-205ENST00000511421 SRSF3P84103 164 aaKnown RBP7.67□□□□□ -1.18
SH3RF1-205ENST00000511421 Q0VG73 95 aa7.67□□□□□ -1.18
SH3RF1-205ENST00000511421 GAGE6Q13070 117 aa7.67□□□□□ -1.18
SH3RF1-205ENST00000511421 Q8N1X5 172 aa7.67□□□□□ -1.18
SH3RF1-205ENST00000511421 Q8N976 141 aa7.67□□□□□ -1.18
SH3RF1-205ENST00000511421 BAALCQ8WXS3 180 aa7.67□□□□□ -1.18
SH3RF1-205ENST00000511421 TRAV26-2A0A0B4J265 109 aa7.66□□□□□ -1.18
SH3RF1-205ENST00000511421 IGHV1-24A0A0C4DH33 117 aa7.66□□□□□ -1.18
SH3RF1-205ENST00000511421 RBX1P62877 108 aa7.66□□□□□ -1.18
SH3RF1-205ENST00000511421 TSKUQ8WUA8 353 aa7.66□□□□□ -1.18
SH3RF1-205ENST00000511421 FRZBQ92765 325 aa7.66□□□□□ -1.18
SH3RF1-205ENST00000511421 GFRA4Q9GZZ7 299 aa7.66□□□□□ -1.18
SH3RF1-205ENST00000511421 FAM231BA6NCW3 169 aa7.65□□□□□ -1.18
SH3RF1-205ENST00000511421 ANGP03950 147 aaKnown RBP7.65□□□□□ -1.18
SH3RF1-205ENST00000511421 TMEM241Q24JQ0 296 aa7.65□□□□□ -1.18
SH3RF1-205ENST00000511421 FAM74A3Q4VXF1 159 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms