RNA–Protein interactions for RNA: ENST00000504782.5

RNF4-206, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-206ENST00000504782 C15orf54Q8N8G6 183 aa8.35□□□□□ -1.07
RNF4-206ENST00000504782 Q8N976 141 aa8.35□□□□□ -1.07
RNF4-206ENST00000504782 C11orf52Q96A22 123 aa8.35□□□□□ -1.07
RNF4-206ENST00000504782 RMI2Q96E14 147 aa8.35□□□□□ -1.07
RNF4-206ENST00000504782 COX11Q9Y6N1 276 aa8.35□□□□□ -1.07
RNF4-206ENST00000504782 CENPWQ5EE01 88 aa8.34□□□□□ -1.07
RNF4-206ENST00000504782 SCXQ7RTU7 201 aa8.34□□□□□ -1.07
RNF4-206ENST00000504782 LINC00528Q8N1L1 170 aa8.34□□□□□ -1.07
RNF4-206ENST00000504782 CHCHD7Q9BUK0 85 aa8.34□□□□□ -1.07
RNF4-206ENST00000504782 ANGP03950 147 aaKnown RBP8.33□□□□□ -1.08
RNF4-206ENST00000504782 IGLC6P0CF74 106 aa8.33□□□□□ -1.08
RNF4-206ENST00000504782 DEFB104AQ8WTQ1 72 aa8.33□□□□□ -1.08
RNF4-206ENST00000504782 CHCHD5Q9BSY4 110 aa8.33□□□□□ -1.08
RNF4-206ENST00000504782 TPPP3Q9BW30 176 aa8.33□□□□□ -1.08
RNF4-206ENST00000504782 MANBALQ9NQG1 85 aa8.33□□□□□ -1.08
RNF4-206ENST00000504782 TRBV20OR9-2A0A075B6H5 130 aa8.32□□□□□ -1.08
RNF4-206ENST00000504782 TRAV1-1A0A0B4J248 108 aa8.32□□□□□ -1.08
RNF4-206ENST00000504782 C19orf71A6NCJ1 209 aa8.32□□□□□ -1.08
RNF4-206ENST00000504782 EIF5AP63241 154 aaKnown RBP8.32□□□□□ -1.08
RNF4-206ENST00000504782 Q0VG73 95 aa8.32□□□□□ -1.08
RNF4-206ENST00000504782 GAGE6Q13070 117 aa8.32□□□□□ -1.08
RNF4-206ENST00000504782 ELOBQ15370 118 aa8.32□□□□□ -1.08
RNF4-206ENST00000504782 KCNIP4Q6PIL6 250 aa8.32□□□□□ -1.08
RNF4-206ENST00000504782 CLPSL2Q6UWE3 100 aa8.32□□□□□ -1.08
RNF4-206ENST00000504782 VAX2Q9UIW0 290 aa8.32□□□□□ -1.08
RNF4-206ENST00000504782 DMBT1Q9UGM3 2413 aaPredicted RBP8.32□□□□□ -1.08
RNF4-206ENST00000504782 M0QY20 66 aa8.31□□□□□ -1.08
RNF4-206ENST00000504782 MGPP08493 103 aa8.31□□□□□ -1.08
RNF4-206ENST00000504782 SULT1A2P50226 295 aa8.31□□□□□ -1.08
RNF4-206ENST00000504782 KRTAP10-4P60372 401 aaPredicted RBP8.31□□□□□ -1.08
RNF4-206ENST00000504782 KRTAP26-1Q6PEX3 210 aa8.31□□□□□ -1.08
RNF4-206ENST00000504782 FER1L6-AS1Q8NA97 138 aa8.31□□□□□ -1.08
RNF4-206ENST00000504782 OR2D3Q8NGH3 330 aa8.31□□□□□ -1.08
RNF4-206ENST00000504782 C1orf43Q9BWL3 253 aa8.31□□□□□ -1.08
RNF4-206ENST00000504782 HLA-DQA1P01909 254 aa8.3□□□□□ -1.08
RNF4-206ENST00000504782 SMIM17P0DL12 118 aa8.3□□□□□ -1.08
RNF4-206ENST00000504782 RBX1P62877 108 aa8.3□□□□□ -1.08
RNF4-206ENST00000504782 SUMO4Q6EEV6 95 aa8.3□□□□□ -1.08
RNF4-206ENST00000504782 CIRBP-AS1Q8TBR5 109 aa8.3□□□□□ -1.08
RNF4-206ENST00000504782 AP1S3Q96PC3 154 aa8.3□□□□□ -1.08
RNF4-206ENST00000504782 USP17L23D6RBM5 183 aa8.29□□□□□ -1.08
RNF4-206ENST00000504782 CRPP02741 224 aa8.29□□□□□ -1.08
RNF4-206ENST00000504782 PRSS1P07477 247 aa8.29□□□□□ -1.08
RNF4-206ENST00000504782 MEF2BQ02080 365 aaPredicted RBP8.29□□□□□ -1.08
RNF4-206ENST00000504782 LYZL1Q6UWQ5 148 aa8.29□□□□□ -1.08
RNF4-206ENST00000504782 LINC00269Q8N2A0 174 aa8.29□□□□□ -1.08
RNF4-206ENST00000504782 DAZAP1Q96EP5 407 aaKnown RBP8.29□□□□□ -1.08
RNF4-206ENST00000504782 CHAC1Q9BUX1 264 aa8.29□□□□□ -1.08
RNF4-206ENST00000504782 PLA2G1BP04054 148 aaKnown RBP8.28□□□□□ -1.08
RNF4-206ENST00000504782 GNG4P50150 75 aa8.28□□□□□ -1.08
RNF4-206ENST00000504782 RAB5CP51148 216 aa8.28□□□□□ -1.08
RNF4-206ENST00000504782 NKX2-5P52952 324 aaPredicted RBP8.28□□□□□ -1.08
RNF4-206ENST00000504782 PRR34Q9NV39 138 aa8.28□□□□□ -1.08
RNF4-206ENST00000504782 MED9Q9NWA0 146 aa8.28□□□□□ -1.08
RNF4-206ENST00000504782 IGLV10-54A0A075B6I4 117 aa8.27□□□□□ -1.09
RNF4-206ENST00000504782 TRBV25-1A0A075B6N4 114 aa8.27□□□□□ -1.09
RNF4-206ENST00000504782 NTF3P20783 257 aa8.27□□□□□ -1.09
RNF4-206ENST00000504782 IQCJQ1A5X6 159 aa8.27□□□□□ -1.09
RNF4-206ENST00000504782 NUDT10Q8NFP7 164 aa8.27□□□□□ -1.09
RNF4-206ENST00000504782 NUDT11Q96G61 164 aa8.27□□□□□ -1.09
RNF4-206ENST00000504782 GFRA4Q9GZZ7 299 aa8.27□□□□□ -1.09
RNF4-206ENST00000504782 LRP1Q07954 4544 aaKnown RBP8.26□□□□□ -1.09
RNF4-206ENST00000504782 IGLV4-60A0A075B6I1 120 aa8.26□□□□□ -1.09
RNF4-206ENST00000504782 J3QL48 77 aa8.26□□□□□ -1.09
RNF4-206ENST00000504782 K7EN84 100 aa8.26□□□□□ -1.09
RNF4-206ENST00000504782 P01737 135 aa8.26□□□□□ -1.09
RNF4-206ENST00000504782 BCL2P10415 239 aa8.26□□□□□ -1.09
RNF4-206ENST00000504782 RPS20P60866 119 aaKnown RBP8.26□□□□□ -1.09
RNF4-206ENST00000504782 CACNG7P62955 275 aa8.26□□□□□ -1.09
RNF4-206ENST00000504782 MIAQ16674 131 aa8.26□□□□□ -1.09
RNF4-206ENST00000504782 TCTE3Q8IZS6 198 aa8.26□□□□□ -1.09
RNF4-206ENST00000504782 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.26□□□□□ -1.09
RNF4-206ENST00000504782 C20orf203Q8NBC4 194 aa8.26□□□□□ -1.09
RNF4-206ENST00000504782 IGHV1-24A0A0C4DH33 117 aa8.25□□□□□ -1.09
RNF4-206ENST00000504782 PANO1I0J062 215 aa8.25□□□□□ -1.09
RNF4-206ENST00000504782 PDE6DO43924 150 aa8.25□□□□□ -1.09
RNF4-206ENST00000504782 IFNA1P01562 189 aa8.25□□□□□ -1.09
RNF4-206ENST00000504782 TMEM97Q5BJF2 176 aa8.25□□□□□ -1.09
RNF4-206ENST00000504782 SMIM12Q96EX1 92 aa8.25□□□□□ -1.09
RNF4-206ENST00000504782 RNASE7Q9H1E1 156 aaKnown RBP8.25□□□□□ -1.09
RNF4-206ENST00000504782 TRAV26-2A0A0B4J265 109 aa8.24□□□□□ -1.09
RNF4-206ENST00000504782 KRTAP29-1A8MX34 341 aaPredicted RBP8.24□□□□□ -1.09
RNF4-206ENST00000504782 F2Z2F3 143 aa8.24□□□□□ -1.09
RNF4-206ENST00000504782 TEX46H3BTG2 121 aa8.24□□□□□ -1.09
RNF4-206ENST00000504782 FOXA3P55318 350 aaPredicted RBP8.24□□□□□ -1.09
RNF4-206ENST00000504782 REG3AQ06141 175 aa8.24□□□□□ -1.09
RNF4-206ENST00000504782 C14orf177Q52M58 125 aa8.24□□□□□ -1.09
RNF4-206ENST00000504782 EIF5AL1Q6IS14 154 aaKnown RBP8.24□□□□□ -1.09
RNF4-206ENST00000504782 RASL11AQ6T310 242 aa8.24□□□□□ -1.09
RNF4-206ENST00000504782 SLC51BQ86UW2 128 aa8.24□□□□□ -1.09
RNF4-206ENST00000504782 C9orf62Q8N4C0 152 aa8.24□□□□□ -1.09
RNF4-206ENST00000504782 OCC1Q8TAD7 63 aa8.24□□□□□ -1.09
RNF4-206ENST00000504782 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.24□□□□□ -1.09
RNF4-206ENST00000504782 PKHD1L1Q86WI1 4243 aa8.24□□□□□ -1.09
RNF4-206ENST00000504782 H7C1H1 209 aa8.23□□□□□ -1.09
RNF4-206ENST00000504782 PKIAP61925 76 aa8.23□□□□□ -1.09
RNF4-206ENST00000504782 DPH3P1Q9H4G8 78 aa8.23□□□□□ -1.09
RNF4-206ENST00000504782 NIT2Q9NQR4 276 aa8.23□□□□□ -1.09
RNF4-206ENST00000504782 FAT3Q8TDW7 4589 aa8.22□□□□□ -1.09
RNF4-206ENST00000504782 XKRY2A2RUG3 117 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms