RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 GRIFINA4D1Z8 144 aa7.4□□□□□ -1.22
LSM6-204ENST00000504181 B4DEV8 164 aa7.4□□□□□ -1.22
LSM6-204ENST00000504181 RAB4BP61018 213 aa7.4□□□□□ -1.22
LSM6-204ENST00000504181 GAGE2BQ13066 116 aa7.4□□□□□ -1.22
LSM6-204ENST00000504181 TMEM252Q8N6L7 170 aa7.4□□□□□ -1.22
LSM6-204ENST00000504181 CARD19Q96LW7 228 aa7.4□□□□□ -1.22
LSM6-204ENST00000504181 A0A087WXM4 84 aa7.39□□□□□ -1.23
LSM6-204ENST00000504181 IGKV3OR2-268A0A0C4DH90 116 aa7.39□□□□□ -1.23
LSM6-204ENST00000504181 AP3S2P59780 193 aa7.39□□□□□ -1.23
LSM6-204ENST00000504181 EIF5AP63241 154 aaKnown RBP7.39□□□□□ -1.23
LSM6-204ENST00000504181 TPRXLQ17RH7 258 aa7.39□□□□□ -1.23
LSM6-204ENST00000504181 IQCJQ1A5X6 159 aa7.39□□□□□ -1.23
LSM6-204ENST00000504181 AQP10Q96PS8 301 aa7.39□□□□□ -1.23
LSM6-204ENST00000504181 FLVCR2Q9UPI3 526 aa7.39□□□□□ -1.23
LSM6-204ENST00000504181 M0R036 132 aa7.38□□□□□ -1.23
LSM6-204ENST00000504181 TPT1P13693 172 aaKnown RBP7.38□□□□□ -1.23
LSM6-204ENST00000504181 PVALBP20472 110 aaPredicted RBP7.38□□□□□ -1.23
LSM6-204ENST00000504181 TAS2R45P59539 299 aa7.38□□□□□ -1.23
LSM6-204ENST00000504181 FLI1Q01543 452 aaPredicted RBP7.38□□□□□ -1.23
LSM6-204ENST00000504181 A0A1B0GUV1 79 aa7.37□□□□□ -1.23
LSM6-204ENST00000504181 SERTM2A0A1B0GWG4 89 aa7.37□□□□□ -1.23
LSM6-204ENST00000504181 FAM25EA8MYX2 175 aa7.37□□□□□ -1.23
LSM6-204ENST00000504181 TCRAP04437 139 aa7.37□□□□□ -1.23
LSM6-204ENST00000504181 C9orf116Q5BN46 136 aaPredicted RBP7.37□□□□□ -1.23
LSM6-204ENST00000504181 OR5C1Q8NGR4 320 aa7.37□□□□□ -1.23
LSM6-204ENST00000504181 MLST8Q9BVC4 326 aa7.37□□□□□ -1.23
LSM6-204ENST00000504181 KCNIP2Q9NS61 270 aa7.37□□□□□ -1.23
LSM6-204ENST00000504181 TRAV6A0A075B6T7 132 aa7.36□□□□□ -1.23
LSM6-204ENST00000504181 FABP5P3A8MUU1 101 aa7.36□□□□□ -1.23
LSM6-204ENST00000504181 K7EQM0 130 aa7.36□□□□□ -1.23
LSM6-204ENST00000504181 DNLZQ5SXM8 178 aa7.36□□□□□ -1.23
LSM6-204ENST00000504181 ZFP82Q8N141 532 aa7.36□□□□□ -1.23
LSM6-204ENST00000504181 MRPS26Q9BYN8 205 aaKnown RBP7.36□□□□□ -1.23
LSM6-204ENST00000504181 A0A087WZ39 114 aa7.35□□□□□ -1.23
LSM6-204ENST00000504181 LOC107984640A0A0U1RRK4 108 aa7.35□□□□□ -1.23
LSM6-204ENST00000504181 KRBOX1C9JBD0 128 aa7.35□□□□□ -1.23
LSM6-204ENST00000504181 NHLH2Q02577 135 aa7.35□□□□□ -1.23
LSM6-204ENST00000504181 ZNF674Q2M3X9 581 aa7.35□□□□□ -1.23
LSM6-204ENST00000504181 KRTAP4-1Q9BYQ7 146 aa7.35□□□□□ -1.23
LSM6-204ENST00000504181 WDR61Q9GZS3 305 aaKnown RBP7.35□□□□□ -1.23
LSM6-204ENST00000504181 C17orf112F2Z3M2 114 aa7.34□□□□□ -1.23
LSM6-204ENST00000504181 F5H697 171 aa7.34□□□□□ -1.23
LSM6-204ENST00000504181 SAPCD1Q5SSQ6 148 aa7.34□□□□□ -1.23
LSM6-204ENST00000504181 KRTAP11-1Q8IUC1 163 aa7.34□□□□□ -1.23
LSM6-204ENST00000504181 C5orf17Q8NAS9 161 aa7.34□□□□□ -1.23
LSM6-204ENST00000504181 CHCHD10Q8WYQ3 142 aaPredicted RBP7.34□□□□□ -1.23
LSM6-204ENST00000504181 SDHCQ99643 169 aaPredicted RBP7.34□□□□□ -1.23
LSM6-204ENST00000504181 TMEM243Q9BU79 118 aa7.34□□□□□ -1.23
LSM6-204ENST00000504181 CARHSP1Q9Y2V2 147 aaKnown RBP7.34□□□□□ -1.23
LSM6-204ENST00000504181 TMSB15BA0A087X1C1 80 aa7.33□□□□□ -1.24
LSM6-204ENST00000504181 BCL2P10415 239 aa7.33□□□□□ -1.24
LSM6-204ENST00000504181 SYCNQ0VAF6 134 aa7.33□□□□□ -1.24
LSM6-204ENST00000504181 PYDC2Q56P42 97 aa7.33□□□□□ -1.24
LSM6-204ENST00000504181 IGLV7-46A0A075B6I9 117 aa7.32□□□□□ -1.24
LSM6-204ENST00000504181 HMGB3O15347 200 aaKnown RBP7.32□□□□□ -1.24
LSM6-204ENST00000504181 NDUFB6O95139 128 aa7.32□□□□□ -1.24
LSM6-204ENST00000504181 SPCS2Q15005 226 aa7.32□□□□□ -1.24
LSM6-204ENST00000504181 LCE3BQ5TA77 95 aa7.32□□□□□ -1.24
LSM6-204ENST00000504181 KRTAP19-1Q8IUB9 90 aa7.32□□□□□ -1.24
LSM6-204ENST00000504181 TRAV34A0A0B4J273 112 aa7.31□□□□□ -1.24
LSM6-204ENST00000504181 UBE2L6O14933 153 aa7.31□□□□□ -1.24
LSM6-204ENST00000504181 TMBIM6P55061 237 aa7.31□□□□□ -1.24
LSM6-204ENST00000504181 FOXI1Q12951 378 aa7.31□□□□□ -1.24
LSM6-204ENST00000504181 RAB32Q13637 225 aa7.31□□□□□ -1.24
LSM6-204ENST00000504181 PQLC2Q6ZP29 291 aa7.31□□□□□ -1.24
LSM6-204ENST00000504181 RPP21Q9H633 154 aaKnown RBP7.31□□□□□ -1.24
LSM6-204ENST00000504181 ARL2-SNX15V9GYD0 113 aa7.31□□□□□ -1.24
LSM6-204ENST00000504181 FGF6P10767 208 aa7.3□□□□□ -1.24
LSM6-204ENST00000504181 CRIP1P50238 77 aa7.3□□□□□ -1.24
LSM6-204ENST00000504181 RPL18AQ02543 176 aaKnown RBP7.3□□□□□ -1.24
LSM6-204ENST00000504181 DEDD2Q8WXF8 326 aa7.3□□□□□ -1.24
LSM6-204ENST00000504181 IGHV1-58A0A0C4DH39 117 aa7.29□□□□□ -1.24
LSM6-204ENST00000504181 SH2D1AO60880 128 aa7.29□□□□□ -1.24
LSM6-204ENST00000504181 DEFA3P59666 94 aa7.29□□□□□ -1.24
LSM6-204ENST00000504181 EPDR1Q9UM22 224 aa7.29□□□□□ -1.24
LSM6-204ENST00000504181 A0A087X002 238 aa7.28□□□□□ -1.24
LSM6-204ENST00000504181 ZNF561-AS1K7EIQ3 104 aa7.28□□□□□ -1.24
LSM6-204ENST00000504181 SUMO1P63165 101 aaKnown RBP7.28□□□□□ -1.24
LSM6-204ENST00000504181 OR10AG1Q8NH19 301 aa7.28□□□□□ -1.24
LSM6-204ENST00000504181 TYMSOSQ8TAI1 123 aa7.28□□□□□ -1.24
LSM6-204ENST00000504181 A0A1W2PPV4 95 aa7.27□□□□□ -1.25
LSM6-204ENST00000504181 CFC1BP0CG36 223 aa7.27□□□□□ -1.25
LSM6-204ENST00000504181 ARL14EPLP0DKL9 152 aa7.27□□□□□ -1.25
LSM6-204ENST00000504181 RPL12P30050 165 aaKnown RBP7.27□□□□□ -1.25
LSM6-204ENST00000504181 XCL1P47992 114 aa7.27□□□□□ -1.25
LSM6-204ENST00000504181 CAMPP49913 170 aa7.27□□□□□ -1.25
LSM6-204ENST00000504181 FAM162BQ5T6X4 162 aa7.27□□□□□ -1.25
LSM6-204ENST00000504181 MUC21A0A140T8X8 626 aa7.26□□□□□ -1.25
LSM6-204ENST00000504181 H3BMQ9 156 aa7.26□□□□□ -1.25
LSM6-204ENST00000504181 ASB16-AS1Q495Z4 193 aa7.26□□□□□ -1.25
LSM6-204ENST00000504181 EIF5AL1Q6IS14 154 aaKnown RBP7.26□□□□□ -1.25
LSM6-204ENST00000504181 LINC00173Q6ZV60 143 aa7.26□□□□□ -1.25
LSM6-204ENST00000504181 Q86TA4 180 aa7.26□□□□□ -1.25
LSM6-204ENST00000504181 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.25□□□□□ -1.25
LSM6-204ENST00000504181 ATP6V1G2O95670 118 aa7.25□□□□□ -1.25
LSM6-204ENST00000504181 SSTP61278 116 aa7.25□□□□□ -1.25
LSM6-204ENST00000504181 MT1HP80294 61 aa7.25□□□□□ -1.25
LSM6-204ENST00000504181 MEF2BQ02080 365 aaPredicted RBP7.25□□□□□ -1.25
LSM6-204ENST00000504181 TSKUQ8WUA8 353 aa7.25□□□□□ -1.25
LSM6-204ENST00000504181 ISOC2Q96AB3 205 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms