RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 PRSS29PA6NIE9 313 aa16.41■□□□□ 0.22
PCDH1-204ENST00000503492 RIPPLY3P57055 190 aa16.41■□□□□ 0.22
PCDH1-204ENST00000503492 CLUHP3Q96NS8 147 aa16.41■□□□□ 0.22
PCDH1-204ENST00000503492 IGIPA6NJ69 53 aa16.41■□□□□ 0.22
PCDH1-204ENST00000503492 ZNF415Q09FC8 603 aa16.41■□□□□ 0.22
PCDH1-204ENST00000503492 JMJD8Q96S16 334 aa16.41■□□□□ 0.22
PCDH1-204ENST00000503492 M0R2P5 195 aa16.4■□□□□ 0.22
PCDH1-204ENST00000503492 INSP01308 110 aa16.4■□□□□ 0.22
PCDH1-204ENST00000503492 LINC00467Q9BRT7 94 aa16.4■□□□□ 0.22
PCDH1-204ENST00000503492 IGHV3-73A0A0B4J1V6 119 aa16.4■□□□□ 0.22
PCDH1-204ENST00000503492 HSD52Q0P140 79 aa16.4■□□□□ 0.22
PCDH1-204ENST00000503492 FASNP49327 2511 aaKnown RBP16.39■□□□□ 0.21
PCDH1-204ENST00000503492 C11orf72Q8NBR9 251 aa16.39■□□□□ 0.21
PCDH1-204ENST00000503492 LINC01549A6NIU2 74 aa16.38■□□□□ 0.21
PCDH1-204ENST00000503492 PROK1P58294 105 aa16.38■□□□□ 0.21
PCDH1-204ENST00000503492 STHQ8IWL8 128 aa16.38■□□□□ 0.21
PCDH1-204ENST00000503492 XCL2Q9UBD3 114 aa16.38■□□□□ 0.21
PCDH1-204ENST00000503492 OR11H12B2RN74 326 aa16.37■□□□□ 0.21
PCDH1-204ENST00000503492 UFSP1Q6NVU6 142 aa16.37■□□□□ 0.21
PCDH1-204ENST00000503492 SEC11AP67812 179 aa16.37■□□□□ 0.21
PCDH1-204ENST00000503492 ADARB2-AS1A8MUL3 147 aa16.36■□□□□ 0.21
PCDH1-204ENST00000503492 PIK3CD-AS1Q5SR53 167 aa16.36■□□□□ 0.21
PCDH1-204ENST00000503492 MAPKAPK5-AS1Q8N8E1 139 aa16.36■□□□□ 0.21
PCDH1-204ENST00000503492 EDA2RQ9HAV5 297 aa16.36■□□□□ 0.21
PCDH1-204ENST00000503492 A8MWV9 139 aa16.36■□□□□ 0.21
PCDH1-204ENST00000503492 PTH2Q96A98 100 aa16.36■□□□□ 0.21
PCDH1-204ENST00000503492 HIGD1BQ9P298 99 aa16.36■□□□□ 0.21
PCDH1-204ENST00000503492 NACAE9PAV3 2078 aa16.35■□□□□ 0.21
PCDH1-204ENST00000503492 NDUFA7O95182 113 aa16.35■□□□□ 0.21
PCDH1-204ENST00000503492 P0DMU3 169 aa16.35■□□□□ 0.21
PCDH1-204ENST00000503492 FAM231AP0DMU4 169 aa16.35■□□□□ 0.21
PCDH1-204ENST00000503492 FAM231CP0DMU5 169 aa16.35■□□□□ 0.21
PCDH1-204ENST00000503492 RHOHQ15669 191 aa16.35■□□□□ 0.21
PCDH1-204ENST00000503492 NSUN5P1Q3KNT7 163 aa16.35■□□□□ 0.21
PCDH1-204ENST00000503492 TMEM141Q96I45 108 aa16.35■□□□□ 0.21
PCDH1-204ENST00000503492 TIMM17AQ99595 171 aa16.35■□□□□ 0.21
PCDH1-204ENST00000503492 SETD2Q9BYW2 2564 aaPredicted RBP16.35■□□□□ 0.21
PCDH1-204ENST00000503492 TRBV25-1A0A075B6N4 114 aa16.35■□□□□ 0.21
PCDH1-204ENST00000503492 TRAV8-6A0A0B4J262 113 aa16.35■□□□□ 0.21
PCDH1-204ENST00000503492 SAP30O75446 220 aa16.35■□□□□ 0.21
PCDH1-204ENST00000503492 I3L3M4 83 aa16.34■□□□□ 0.21
PCDH1-204ENST00000503492 C1orf158Q8N1D5 194 aa16.34■□□□□ 0.21
PCDH1-204ENST00000503492 AZU1P20160 251 aa16.33■□□□□ 0.2
PCDH1-204ENST00000503492 CFAP126Q5VTH2 177 aa16.33■□□□□ 0.2
PCDH1-204ENST00000503492 LY6G6DO95868 133 aa16.33■□□□□ 0.2
PCDH1-204ENST00000503492 PMVKQ15126 192 aa16.33■□□□□ 0.2
PCDH1-204ENST00000503492 SPXQ9BT56 116 aa16.33■□□□□ 0.2
PCDH1-204ENST00000503492 CHAC1Q9BUX1 264 aa16.33■□□□□ 0.2
PCDH1-204ENST00000503492 MRPL16Q9NX20 251 aaKnown RBP16.33■□□□□ 0.2
PCDH1-204ENST00000503492 IGLV4-69A0A075B6H9 119 aa16.32■□□□□ 0.2
PCDH1-204ENST00000503492 Q6ZSN1 163 aa16.32■□□□□ 0.2
PCDH1-204ENST00000503492 CST9LQ9H4G1 147 aa16.32■□□□□ 0.2
PCDH1-204ENST00000503492 HIVEP2P31629 2446 aa16.31■□□□□ 0.2
PCDH1-204ENST00000503492 IGHV3OR16-12A0A075B7B8 117 aa16.3■□□□□ 0.2
PCDH1-204ENST00000503492 BEAN1Q3B7T3 259 aa16.3■□□□□ 0.2
PCDH1-204ENST00000503492 C20orf203Q8NBC4 194 aa16.3■□□□□ 0.2
PCDH1-204ENST00000503492 Q9UF83 564 aa16.3■□□□□ 0.2
PCDH1-204ENST00000503492 C11orf86A6NJI1 115 aa16.3■□□□□ 0.2
PCDH1-204ENST00000503492 IGLV1-51P01701 117 aa16.3■□□□□ 0.2
PCDH1-204ENST00000503492 EMP1P54849 157 aa16.3■□□□□ 0.2
PCDH1-204ENST00000503492 GCN1Q92616 2671 aaKnown RBP16.29■□□□□ 0.2
PCDH1-204ENST00000503492 CCL25O15444 150 aa16.29■□□□□ 0.2
PCDH1-204ENST00000503492 UBE2V1Q13404 147 aa16.29■□□□□ 0.2
PCDH1-204ENST00000503492 OR11H2Q8NH07 326 aa16.29■□□□□ 0.2
PCDH1-204ENST00000503492 A6NDN8 102 aa16.28■□□□□ 0.2
PCDH1-204ENST00000503492 E9PLD3 99 aa16.28■□□□□ 0.2
PCDH1-204ENST00000503492 OPRPNQ99935 248 aaPredicted RBP16.28■□□□□ 0.2
PCDH1-204ENST00000503492 KRTAP10-3P60369 221 aa16.28■□□□□ 0.2
PCDH1-204ENST00000503492 PTTG1IPP53801 180 aa16.27■□□□□ 0.2
PCDH1-204ENST00000503492 VAMP3Q15836 100 aa16.27■□□□□ 0.2
PCDH1-204ENST00000503492 WFDC10AQ9H1F0 79 aa16.27■□□□□ 0.2
PCDH1-204ENST00000503492 TNFRSF18Q9Y5U5 241 aa16.27■□□□□ 0.2
PCDH1-204ENST00000503492 RS1O15537 224 aa16.27■□□□□ 0.19
PCDH1-204ENST00000503492 HECTD1Q9ULT8 2610 aa16.27■□□□□ 0.19
PCDH1-204ENST00000503492 GCSHP23434 173 aa16.26■□□□□ 0.19
PCDH1-204ENST00000503492 PRADC1Q9BSG0 188 aa16.26■□□□□ 0.19
PCDH1-204ENST00000503492 K7EP13 123 aa16.26■□□□□ 0.19
PCDH1-204ENST00000503492 RHODO00212 210 aa16.26■□□□□ 0.19
PCDH1-204ENST00000503492 CMC4P56277 68 aaPredicted RBP16.26■□□□□ 0.19
PCDH1-204ENST00000503492 PAPPA-AS1Q5QFB9 102 aa16.26■□□□□ 0.19
PCDH1-204ENST00000503492 IL17DQ8TAD2 202 aa16.26■□□□□ 0.19
PCDH1-204ENST00000503492 C19orf73Q9NVV2 129 aa16.26■□□□□ 0.19
PCDH1-204ENST00000503492 H3BRM9 83 aa16.25■□□□□ 0.19
PCDH1-204ENST00000503492 FXYD2P54710 66 aa16.25■□□□□ 0.19
PCDH1-204ENST00000503492 MYMXA0A1B0GTQ4 84 aa16.24■□□□□ 0.19
PCDH1-204ENST00000503492 IGHV3-53P01767 116 aa16.24■□□□□ 0.19
PCDH1-204ENST00000503492 GIG44P09565 113 aaPredicted RBP16.24■□□□□ 0.19
PCDH1-204ENST00000503492 ZNRF2Q8NHG8 242 aa16.24■□□□□ 0.19
PCDH1-204ENST00000503492 RNASE8Q8TDE3 154 aaKnown RBP16.24■□□□□ 0.19
PCDH1-204ENST00000503492 AMMECR1LQ6DCA0 310 aa16.22■□□□□ 0.19
PCDH1-204ENST00000503492 FAM110AQ9BQ89 295 aa16.22■□□□□ 0.19
PCDH1-204ENST00000503492 CEND1Q8N111 149 aa16.22■□□□□ 0.19
PCDH1-204ENST00000503492 IGLV4-3A0A075B6K6 122 aa16.21■□□□□ 0.19
PCDH1-204ENST00000503492 TM2D2Q9BX73 214 aa16.21■□□□□ 0.19
PCDH1-204ENST00000503492 SETXQ7Z333 2677 aaKnown RBP16.21■□□□□ 0.19
PCDH1-204ENST00000503492 TRGV1A0A0A0MS02 117 aa16.2■□□□□ 0.18
PCDH1-204ENST00000503492 C9orf118A6NHY6 69 aa16.2■□□□□ 0.18
PCDH1-204ENST00000503492 NDUFA11Q86Y39 141 aa16.2■□□□□ 0.18
PCDH1-204ENST00000503492 RPL35AP18077 110 aaKnown RBP16.2■□□□□ 0.18
PCDH1-204ENST00000503492 TMEM170BQ5T4T1 132 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms