RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 MLST8Q9BVC4 326 aa12.35□□□□□ -0.43
HMGXB3-202ENST00000503427 ATP6V0E2Q8NHE4 81 aa12.35□□□□□ -0.43
HMGXB3-202ENST00000503427 LINC00322Q6ZN03 302 aaPredicted RBP12.34□□□□□ -0.43
HMGXB3-202ENST00000503427 Q6ZQT7 251 aa12.34□□□□□ -0.43
HMGXB3-202ENST00000503427 PRR14LQ5THK1 2151 aa12.34□□□□□ -0.43
HMGXB3-202ENST00000503427 TRBV7-3A0A075B6L6 115 aa12.34□□□□□ -0.43
HMGXB3-202ENST00000503427 C4orf3Q8WVX3 66 aa12.34□□□□□ -0.43
HMGXB3-202ENST00000503427 CITED1Q99966 193 aa12.33□□□□□ -0.43
HMGXB3-202ENST00000503427 COX7B2Q8TF08 81 aa12.33□□□□□ -0.44
HMGXB3-202ENST00000503427 GYPEP15421 78 aa12.33□□□□□ -0.44
HMGXB3-202ENST00000503427 ZMAT4Q9H898 229 aa12.33□□□□□ -0.44
HMGXB3-202ENST00000503427 GDF5OSQ5U4N7 250 aa12.32□□□□□ -0.44
HMGXB3-202ENST00000503427 CLPSL1A2RUU4 121 aa12.32□□□□□ -0.44
HMGXB3-202ENST00000503427 UNQ9165/PRO28630Q6UXU0 137 aa12.32□□□□□ -0.44
HMGXB3-202ENST00000503427 MBD6Q96DN6 1003 aa12.32□□□□□ -0.44
HMGXB3-202ENST00000503427 PIFOQ8TCI5 191 aa12.31□□□□□ -0.44
HMGXB3-202ENST00000503427 ZNF80P51504 273 aaPredicted RBP12.31□□□□□ -0.44
HMGXB3-202ENST00000503427 FOXI1Q12951 378 aa12.31□□□□□ -0.44
HMGXB3-202ENST00000503427 C20orf203Q8NBC4 194 aa12.31□□□□□ -0.44
HMGXB3-202ENST00000503427 DEFB1P60022 68 aa12.31□□□□□ -0.44
HMGXB3-202ENST00000503427 VSIG2Q96IQ7 327 aa12.31□□□□□ -0.44
HMGXB3-202ENST00000503427 A0A0J9YX75 114 aa12.31□□□□□ -0.44
HMGXB3-202ENST00000503427 MRPL23Q16540 153 aaKnown RBP12.31□□□□□ -0.44
HMGXB3-202ENST00000503427 YPEL4Q96NS1 127 aa12.31□□□□□ -0.44
HMGXB3-202ENST00000503427 B5MCH6 92 aa12.3□□□□□ -0.44
HMGXB3-202ENST00000503427 COX7A2LO14548 114 aa12.3□□□□□ -0.44
HMGXB3-202ENST00000503427 HIST2H2BCQ6DN03 193 aa12.3□□□□□ -0.44
HMGXB3-202ENST00000503427 C11orf71Q6IPW1 123 aa12.3□□□□□ -0.44
HMGXB3-202ENST00000503427 C1orf229Q6ZS94 237 aaPredicted RBP12.3□□□□□ -0.44
HMGXB3-202ENST00000503427 IGLC6P0CF74 106 aa12.3□□□□□ -0.44
HMGXB3-202ENST00000503427 IGKV2D-24A0A075B6R9 120 aa12.3□□□□□ -0.44
HMGXB3-202ENST00000503427 NACAE9PAV3 2078 aa12.29□□□□□ -0.44
HMGXB3-202ENST00000503427 CCDC140Q96MF4 163 aa12.29□□□□□ -0.44
HMGXB3-202ENST00000503427 A0A0B4J2C4 111 aa12.29□□□□□ -0.44
HMGXB3-202ENST00000503427 IGHV1-58A0A0C4DH39 117 aa12.29□□□□□ -0.44
HMGXB3-202ENST00000503427 RS1O15537 224 aa12.29□□□□□ -0.44
HMGXB3-202ENST00000503427 IGF1P05019 195 aa12.29□□□□□ -0.44
HMGXB3-202ENST00000503427 ATP5G1P05496 136 aa12.29□□□□□ -0.44
HMGXB3-202ENST00000503427 TRBV10-2A0A0K0K1G8 114 aa12.28□□□□□ -0.44
HMGXB3-202ENST00000503427 MDFICQ9P1T7 246 aa12.28□□□□□ -0.44
HMGXB3-202ENST00000503427 TRBV12-3P01733 135 aa12.28□□□□□ -0.44
HMGXB3-202ENST00000503427 EBI3Q14213 229 aa12.28□□□□□ -0.44
HMGXB3-202ENST00000503427 H3BT86 120 aa12.28□□□□□ -0.44
HMGXB3-202ENST00000503427 C1orf43Q9BWL3 253 aa12.28□□□□□ -0.44
HMGXB3-202ENST00000503427 DAND5Q8N907 189 aa12.28□□□□□ -0.44
HMGXB3-202ENST00000503427 G3V4G9 280 aa12.27□□□□□ -0.44
HMGXB3-202ENST00000503427 OPRPNQ99935 248 aaPredicted RBP12.27□□□□□ -0.44
HMGXB3-202ENST00000503427 SPART-AS1P0CW21 52 aa12.27□□□□□ -0.45
HMGXB3-202ENST00000503427 DSCAMO60469 2012 aa12.27□□□□□ -0.45
HMGXB3-202ENST00000503427 DNAJC9-AS1A6NH13 148 aa12.26□□□□□ -0.45
HMGXB3-202ENST00000503427 LGALS9O00182 355 aa12.26□□□□□ -0.45
HMGXB3-202ENST00000503427 LRP4O75096 1905 aa12.26□□□□□ -0.45
HMGXB3-202ENST00000503427 CAMK2N2Q96S95 79 aa12.26□□□□□ -0.45
HMGXB3-202ENST00000503427 NAV2Q8IVL1 2488 aa12.25□□□□□ -0.45
HMGXB3-202ENST00000503427 LY6LH3BQJ8 138 aa12.25□□□□□ -0.45
HMGXB3-202ENST00000503427 IGHV4-31P0DP07 118 aa12.25□□□□□ -0.45
HMGXB3-202ENST00000503427 CRYGBP07316 175 aa12.25□□□□□ -0.45
HMGXB3-202ENST00000503427 INSL3P51460 131 aa12.25□□□□□ -0.45
HMGXB3-202ENST00000503427 IGLV10-54A0A075B6I4 117 aa12.25□□□□□ -0.45
HMGXB3-202ENST00000503427 NDUFA11Q86Y39 141 aa12.25□□□□□ -0.45
HMGXB3-202ENST00000503427 CITED2Q99967 270 aaPredicted RBP12.25□□□□□ -0.45
HMGXB3-202ENST00000503427 Q6YL49 198 aa12.25□□□□□ -0.45
HMGXB3-202ENST00000503427 IGHV3-30-3P0DP02 117 aa12.24□□□□□ -0.45
HMGXB3-202ENST00000503427 TMEM61Q8N0U2 210 aa12.24□□□□□ -0.45
HMGXB3-202ENST00000503427 hADV29S1A0JD25 119 aa12.24□□□□□ -0.45
HMGXB3-202ENST00000503427 H3BQ85 93 aa12.24□□□□□ -0.45
HMGXB3-202ENST00000503427 HHLA3Q9XRX5 114 aa12.24□□□□□ -0.45
HMGXB3-202ENST00000503427 TRBV10-1A0A0K0K1A3 114 aa12.24□□□□□ -0.45
HMGXB3-202ENST00000503427 TNCP24821 2201 aa12.23□□□□□ -0.45
HMGXB3-202ENST00000503427 ODF3Q96PU9 254 aa12.23□□□□□ -0.45
HMGXB3-202ENST00000503427 CXCL5P42830 114 aa12.23□□□□□ -0.45
HMGXB3-202ENST00000503427 ATOX1O00244 68 aa12.23□□□□□ -0.45
HMGXB3-202ENST00000503427 LINC01548A6NM66 108 aa12.22□□□□□ -0.45
HMGXB3-202ENST00000503427 FUSP35637 526 aaKnown RBP eCLIP12.22□□□□□ -0.45
HMGXB3-202ENST00000503427 TP53TG3Q9ULZ0 132 aa12.22□□□□□ -0.45
HMGXB3-202ENST00000503427 JMJD7-PLA2G4BH0Y9G9 81 aa12.22□□□□□ -0.45
HMGXB3-202ENST00000503427 TMEM263Q8WUH6 116 aaKnown RBP12.22□□□□□ -0.45
HMGXB3-202ENST00000503427 SS18L2Q9UHA2 77 aa12.22□□□□□ -0.45
HMGXB3-202ENST00000503427 CLEC2BQ92478 149 aa12.21□□□□□ -0.45
HMGXB3-202ENST00000503427 DEFB105AQ8NG35 78 aa12.21□□□□□ -0.45
HMGXB3-202ENST00000503427 ETDCA0A1B0GVM5 59 aa12.21□□□□□ -0.46
HMGXB3-202ENST00000503427 Q9HAA7 133 aa12.21□□□□□ -0.46
HMGXB3-202ENST00000503427 NAV3Q8IVL0 2385 aa12.21□□□□□ -0.46
HMGXB3-202ENST00000503427 FAM236AA0A1B0GUQ0 79 aa12.2□□□□□ -0.46
HMGXB3-202ENST00000503427 FAM236BA0A1B0GV22 79 aa12.2□□□□□ -0.46
HMGXB3-202ENST00000503427 LECT2O14960 151 aa12.2□□□□□ -0.46
HMGXB3-202ENST00000503427 PLA2G2AP14555 144 aa12.2□□□□□ -0.46
HMGXB3-202ENST00000503427 UBE2BP63146 152 aa12.2□□□□□ -0.46
HMGXB3-202ENST00000503427 RBM3P98179 157 aaKnown RBP12.2□□□□□ -0.46
HMGXB3-202ENST00000503427 MIAQ16674 131 aa12.2□□□□□ -0.46
HMGXB3-202ENST00000503427 MIR7-3HGQ8N6C7 128 aa12.2□□□□□ -0.46
HMGXB3-202ENST00000503427 NEXN-AS1Q8NBZ9 246 aa12.19□□□□□ -0.46
HMGXB3-202ENST00000503427 PIEZO2Q9H5I5 2752 aa12.19□□□□□ -0.46
HMGXB3-202ENST00000503427 TM2D2Q9BX73 214 aa12.19□□□□□ -0.46
HMGXB3-202ENST00000503427 TLN1Q9Y490 2541 aaKnown RBP12.19□□□□□ -0.46
HMGXB3-202ENST00000503427 IGHV4-4A0A075B6R2 117 aa12.19□□□□□ -0.46
HMGXB3-202ENST00000503427 IGKV3D-7A0A0C4DH55 119 aa12.19□□□□□ -0.46
HMGXB3-202ENST00000503427 NDUFA1O15239 70 aa12.19□□□□□ -0.46
HMGXB3-202ENST00000503427 WFDC11Q8NEX6 87 aa12.19□□□□□ -0.46
HMGXB3-202ENST00000503427 MRAPQ8TCY5 172 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 144.6 ms