RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 PHIPQ8WWQ0 1821 aa0.95□□□□□ -2.26
HMGB1P35-201ENST00000503360 LOC101927531A0A1B0GV80 90 aa0.95□□□□□ -2.26
HMGB1P35-201ENST00000503360 NAP1L6A6NFF2 107 aa0.95□□□□□ -2.26
HMGB1P35-201ENST00000503360 RPL37AP61513 92 aaKnown RBP0.95□□□□□ -2.26
HMGB1P35-201ENST00000503360 SPRNQ5BIV9 151 aa0.95□□□□□ -2.26
HMGB1P35-201ENST00000503360 XAF1Q6GPH4 301 aa0.95□□□□□ -2.26
HMGB1P35-201ENST00000503360 ZNF563Q8TA94 476 aa0.95□□□□□ -2.26
HMGB1P35-201ENST00000503360 C10orf82Q8WW14 230 aa0.95□□□□□ -2.26
HMGB1P35-201ENST00000503360 VAMP8Q9BV40 100 aa0.95□□□□□ -2.26
HMGB1P35-201ENST00000503360 SCP2D1Q9UJQ7 156 aa0.95□□□□□ -2.26
HMGB1P35-201ENST00000503360 LINC00312Q9Y6C7 94 aa0.95□□□□□ -2.26
HMGB1P35-201ENST00000503360 SDK1Q7Z5N4 2213 aa0.95□□□□□ -2.26
HMGB1P35-201ENST00000503360 SORL1Q92673 2214 aa0.95□□□□□ -2.26
HMGB1P35-201ENST00000503360 IGKV2-40A0A087WW87 121 aaPredicted RBP0.94□□□□□ -2.26
HMGB1P35-201ENST00000503360 TRBV7-1A0A0A6YYK4 115 aa0.94□□□□□ -2.26
HMGB1P35-201ENST00000503360 GNGT2O14610 69 aa0.94□□□□□ -2.26
HMGB1P35-201ENST00000503360 IGKV2D-40P01614 121 aaPredicted RBP0.94□□□□□ -2.26
HMGB1P35-201ENST00000503360 MT-ATP8P03928 68 aa0.94□□□□□ -2.26
HMGB1P35-201ENST00000503360 UBE2D1P51668 147 aa0.94□□□□□ -2.26
HMGB1P35-201ENST00000503360 GNG11P61952 73 aa0.94□□□□□ -2.26
HMGB1P35-201ENST00000503360 SSBP1Q04837 148 aaKnown RBP0.94□□□□□ -2.26
HMGB1P35-201ENST00000503360 PCOTHQ58A44 107 aa0.94□□□□□ -2.26
HMGB1P35-201ENST00000503360 C10orf128Q5T292 105 aa0.94□□□□□ -2.26
HMGB1P35-201ENST00000503360 BET1LQ9NYM9 111 aa0.94□□□□□ -2.26
HMGB1P35-201ENST00000503360 CASKIN1Q8WXD9 1431 aa0.94□□□□□ -2.26
HMGB1P35-201ENST00000503360 SCAPERQ9BY12 1400 aa0.94□□□□□ -2.26
HMGB1P35-201ENST00000503360 VWDEQ8N2E2 1590 aa0.94□□□□□ -2.26
HMGB1P35-201ENST00000503360 CHD1O14646 1710 aa0.94□□□□□ -2.26
HMGB1P35-201ENST00000503360 ABCA3Q99758 1704 aa0.94□□□□□ -2.26
HMGB1P35-201ENST00000503360 CITO14578 2027 aa0.94□□□□□ -2.26
HMGB1P35-201ENST00000503360 ARHGAP5Q13017 1502 aa0.94□□□□□ -2.26
HMGB1P35-201ENST00000503360 KDM5AP29375 1690 aaKnown RBP0.94□□□□□ -2.26
HMGB1P35-201ENST00000503360 ZNF142P52746 1687 aaPredicted RBP0.94□□□□□ -2.26
HMGB1P35-201ENST00000503360 CTTNBP2Q8WZ74 1663 aa0.94□□□□□ -2.26
HMGB1P35-201ENST00000503360 PTPRDP23468 1912 aa0.93□□□□□ -2.26
HMGB1P35-201ENST00000503360 FYCO1Q9BQS8 1478 aa0.93□□□□□ -2.26
HMGB1P35-201ENST00000503360 CR1P17927 2039 aa0.93□□□□□ -2.26
HMGB1P35-201ENST00000503360 IGLC1P0CG04 106 aa0.93□□□□□ -2.26
HMGB1P35-201ENST00000503360 CCL3L1P16619 93 aa0.93□□□□□ -2.26
HMGB1P35-201ENST00000503360 ZNF56Q15929 161 aa0.93□□□□□ -2.26
HMGB1P35-201ENST00000503360 FAM74A4Q5TZK3 123 aa0.93□□□□□ -2.26
HMGB1P35-201ENST00000503360 C20orf197Q8N268 126 aa0.93□□□□□ -2.26
HMGB1P35-201ENST00000503360 C9orf62Q8N4C0 152 aa0.93□□□□□ -2.26
HMGB1P35-201ENST00000503360 COX7B2Q8TF08 81 aa0.93□□□□□ -2.26
HMGB1P35-201ENST00000503360 LINC00474Q9P2X8 69 aa0.93□□□□□ -2.26
HMGB1P35-201ENST00000503360 UNC13CQ8NB66 2214 aa0.93□□□□□ -2.26
HMGB1P35-201ENST00000503360 GAPVD1Q14C86 1478 aa0.92□□□□□ -2.26
HMGB1P35-201ENST00000503360 MAGI1Q96QZ7 1491 aaPredicted RBP0.92□□□□□ -2.26
HMGB1P35-201ENST00000503360 CDK12Q9NYV4 1490 aaPredicted RBP0.92□□□□□ -2.26
HMGB1P35-201ENST00000503360 GBF1Q92538 1859 aa0.92□□□□□ -2.26
HMGB1P35-201ENST00000503360 ABCC5O15440 1437 aa0.92□□□□□ -2.26
HMGB1P35-201ENST00000503360 PPIP5K1Q6PFW1 1433 aa0.92□□□□□ -2.26
HMGB1P35-201ENST00000503360 TET3O43151 1660 aa0.92□□□□□ -2.26
HMGB1P35-201ENST00000503360 TRBV7-3A0A075B6L6 115 aa0.92□□□□□ -2.26
HMGB1P35-201ENST00000503360 IGKV2-29A2NJV5 120 aaPredicted RBP0.92□□□□□ -2.26
HMGB1P35-201ENST00000503360 GYPAP02724 150 aa0.92□□□□□ -2.26
HMGB1P35-201ENST00000503360 ASIPP42127 132 aa0.92□□□□□ -2.26
HMGB1P35-201ENST00000503360 CAV3P56539 151 aa0.92□□□□□ -2.26
HMGB1P35-201ENST00000503360 ELOF1P60002 83 aaKnown RBP0.92□□□□□ -2.26
HMGB1P35-201ENST00000503360 SEC11AP67812 179 aa0.92□□□□□ -2.26
HMGB1P35-201ENST00000503360 Q0VG73 95 aa0.92□□□□□ -2.26
HMGB1P35-201ENST00000503360 FXYD3Q14802 87 aa0.92□□□□□ -2.26
HMGB1P35-201ENST00000503360 OBSCN-AS1Q96MR7 158 aa0.92□□□□□ -2.26
HMGB1P35-201ENST00000503360 MGST2Q99735 147 aa0.92□□□□□ -2.26
HMGB1P35-201ENST00000503360 PXDNQ92626 1479 aa0.92□□□□□ -2.26
HMGB1P35-201ENST00000503360 SNRNP200O75643 2136 aaKnown RBP0.91□□□□□ -2.26
HMGB1P35-201ENST00000503360 NBDYA0A0U1RRE5 68 aa0.91□□□□□ -2.26
HMGB1P35-201ENST00000503360 LOC285095A0A1B0GVY8 99 aa0.91□□□□□ -2.26
HMGB1P35-201ENST00000503360 hADV29S1A0JD25 119 aa0.91□□□□□ -2.26
HMGB1P35-201ENST00000503360 ATOX1O00244 68 aa0.91□□□□□ -2.26
HMGB1P35-201ENST00000503360 NDUFC1O43677 76 aa0.91□□□□□ -2.26
HMGB1P35-201ENST00000503360 KLKP1Q107X0 134 aa0.91□□□□□ -2.26
HMGB1P35-201ENST00000503360 PYY3Q5JQD4 70 aa0.91□□□□□ -2.26
HMGB1P35-201ENST00000503360 Q6ZQY7 126 aa0.91□□□□□ -2.26
HMGB1P35-201ENST00000503360 DEFB119Q8N690 84 aa0.91□□□□□ -2.26
HMGB1P35-201ENST00000503360 C5orf56Q8N8D9 126 aa0.91□□□□□ -2.26
HMGB1P35-201ENST00000503360 TSLPQ969D9 159 aa0.91□□□□□ -2.26
HMGB1P35-201ENST00000503360 FAM167A-AS1Q96KT0 104 aa0.91□□□□□ -2.26
HMGB1P35-201ENST00000503360 PMCHL2Q9BQD1 86 aa0.91□□□□□ -2.26
HMGB1P35-201ENST00000503360 UQCR10Q9UDW1 63 aa0.91□□□□□ -2.26
HMGB1P35-201ENST00000503360 V9GYV3 84 aa0.91□□□□□ -2.26
HMGB1P35-201ENST00000503360 MYO18AQ92614 2054 aaKnown RBP0.91□□□□□ -2.26
HMGB1P35-201ENST00000503360 ARAP2Q8WZ64 1704 aa0.91□□□□□ -2.26
HMGB1P35-201ENST00000503360 TNS1Q9HBL0 1735 aaKnown RBP0.91□□□□□ -2.26
HMGB1P35-201ENST00000503360 PATJQ8NI35 1801 aa0.91□□□□□ -2.26
HMGB1P35-201ENST00000503360 TNRC6BQ9UPQ9 1833 aaKnown RBP0.91□□□□□ -2.26
HMGB1P35-201ENST00000503360 BAZ1AQ9NRL2 1556 aaPredicted RBP0.91□□□□□ -2.26
HMGB1P35-201ENST00000503360 BLMP54132 1417 aaPredicted RBP0.9□□□□□ -2.26
HMGB1P35-201ENST00000503360 MED13Q9UHV7 2174 aa0.9□□□□□ -2.26
HMGB1P35-201ENST00000503360 SBF2Q86WG5 1849 aa0.9□□□□□ -2.27
HMGB1P35-201ENST00000503360 WNK3Q9BYP7 1800 aa0.9□□□□□ -2.27
HMGB1P35-201ENST00000503360 CLPSL1A2RUU4 121 aa0.9□□□□□ -2.27
HMGB1P35-201ENST00000503360 CRYM-AS1A6NIL9 109 aa0.9□□□□□ -2.27
HMGB1P35-201ENST00000503360 SFT2D2O95562 160 aa0.9□□□□□ -2.27
HMGB1P35-201ENST00000503360 PPP1R17O96001 155 aa0.9□□□□□ -2.27
HMGB1P35-201ENST00000503360 EDDM3BP56851 147 aa0.9□□□□□ -2.27
HMGB1P35-201ENST00000503360 Q86TA4 180 aa0.9□□□□□ -2.27
HMGB1P35-201ENST00000503360 LINC00208Q96KT6 92 aa0.9□□□□□ -2.27
HMGB1P35-201ENST00000503360 NPVFQ9HCQ7 196 aa0.9□□□□□ -2.27
HMGB1P35-201ENST00000503360 DYNLRB1Q9NP97 96 aa0.9□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms