RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 C10orf128Q5T292 105 aa2.38□□□□□ -2.03
HMGB1P3-201ENST00000502802 KTN1-AS1Q86SY8 53 aa2.38□□□□□ -2.03
HMGB1P3-201ENST00000502802 FAM24BQ8N5W8 94 aa2.38□□□□□ -2.03
HMGB1P3-201ENST00000502802 OR5A2Q8NGI9 324 aa2.38□□□□□ -2.03
HMGB1P3-201ENST00000502802 PFN4Q8NHR9 129 aa2.38□□□□□ -2.03
HMGB1P3-201ENST00000502802 DNAH3Q8TD57 4116 aa2.38□□□□□ -2.03
HMGB1P3-201ENST00000502802 GNPDA2Q8TDQ7 276 aa2.38□□□□□ -2.03
HMGB1P3-201ENST00000502802 ZNF418Q8TF45 676 aaPredicted RBP2.38□□□□□ -2.03
HMGB1P3-201ENST00000502802 TIMM21Q9BVV7 248 aa2.38□□□□□ -2.03
HMGB1P3-201ENST00000502802 SPANXDQ9BXN6 97 aa2.38□□□□□ -2.03
HMGB1P3-201ENST00000502802 OR2J1Q9GZK6 312 aa2.38□□□□□ -2.03
HMGB1P3-201ENST00000502802 LAMTOR3Q9UHA4 124 aa2.38□□□□□ -2.03
HMGB1P3-201ENST00000502802 V9GYS6 101 aa2.38□□□□□ -2.03
HMGB1P3-201ENST00000502802 A0A087WX48 190 aa2.37□□□□□ -2.03
HMGB1P3-201ENST00000502802 CLDN25C9JDP6 229 aa2.37□□□□□ -2.03
HMGB1P3-201ENST00000502802 J3KT08 172 aa2.37□□□□□ -2.03
HMGB1P3-201ENST00000502802 CORTO00230 105 aa2.37□□□□□ -2.03
HMGB1P3-201ENST00000502802 EDF1O60869 148 aaKnown RBP2.37□□□□□ -2.03
HMGB1P3-201ENST00000502802 G6PCP35575 357 aa2.37□□□□□ -2.03
HMGB1P3-201ENST00000502802 RAB5CP51148 216 aa2.37□□□□□ -2.03
HMGB1P3-201ENST00000502802 NCS1P62166 190 aa2.37□□□□□ -2.03
HMGB1P3-201ENST00000502802 UBA52P62987 128 aaKnown RBP2.37□□□□□ -2.03
HMGB1P3-201ENST00000502802 PSG9Q00887 426 aa2.37□□□□□ -2.03
HMGB1P3-201ENST00000502802 KISS1Q15726 138 aa2.37□□□□□ -2.03
HMGB1P3-201ENST00000502802 TPRXLQ17RH7 258 aa2.37□□□□□ -2.03
HMGB1P3-201ENST00000502802 FAM27BQ5VT28 67 aa2.37□□□□□ -2.03
HMGB1P3-201ENST00000502802 C3orf56Q8N813 242 aa2.37□□□□□ -2.03
HMGB1P3-201ENST00000502802 SLC25A40Q8TBP6 338 aa2.37□□□□□ -2.03
HMGB1P3-201ENST00000502802 C10orf82Q8WW14 230 aa2.37□□□□□ -2.03
HMGB1P3-201ENST00000502802 MALSU1Q96EH3 234 aa2.37□□□□□ -2.03
HMGB1P3-201ENST00000502802 PSMG3Q9BT73 122 aaPredicted RBP2.37□□□□□ -2.03
HMGB1P3-201ENST00000502802 OR2H1Q9GZK4 316 aa2.37□□□□□ -2.03
HMGB1P3-201ENST00000502802 TAF9BQ9HBM6 251 aa2.37□□□□□ -2.03
HMGB1P3-201ENST00000502802 SCN3BQ9NY72 215 aa2.37□□□□□ -2.03
HMGB1P3-201ENST00000502802 SS18L2Q9UHA2 77 aa2.37□□□□□ -2.03
HMGB1P3-201ENST00000502802 ERG28Q9UKR5 140 aa2.37□□□□□ -2.03
HMGB1P3-201ENST00000502802 TRAV30A0A087WSZ9 112 aa2.36□□□□□ -2.03
HMGB1P3-201ENST00000502802 TRAV27A0A087WT01 109 aa2.36□□□□□ -2.03
HMGB1P3-201ENST00000502802 A0A0G2JND7 137 aa2.36□□□□□ -2.03
HMGB1P3-201ENST00000502802 TRBV10-2A0A0K0K1G8 114 aa2.36□□□□□ -2.03
HMGB1P3-201ENST00000502802 TMEM218A2RU14 115 aa2.36□□□□□ -2.03
HMGB1P3-201ENST00000502802 IFITM5A6NNB3 132 aa2.36□□□□□ -2.03
HMGB1P3-201ENST00000502802 HMSDA8MTL9 139 aa2.36□□□□□ -2.03
HMGB1P3-201ENST00000502802 H7C1C5 153 aa2.36□□□□□ -2.03
HMGB1P3-201ENST00000502802 CDC42EP2O14613 210 aa2.36□□□□□ -2.03
HMGB1P3-201ENST00000502802 LCN6P62502 163 aa2.36□□□□□ -2.03
HMGB1P3-201ENST00000502802 COL5A1-AS1Q5SY13 56 aa2.36□□□□□ -2.03
HMGB1P3-201ENST00000502802 KRTAP5-5Q701N2 237 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P3-201ENST00000502802 C9orf62Q8N4C0 152 aa2.36□□□□□ -2.03
HMGB1P3-201ENST00000502802 SIGLECL1Q8N7X8 197 aa2.36□□□□□ -2.03
HMGB1P3-201ENST00000502802 DEFB108BQ8NET1 73 aa2.36□□□□□ -2.03
HMGB1P3-201ENST00000502802 OR11H6Q8NGC7 330 aa2.36□□□□□ -2.03
HMGB1P3-201ENST00000502802 MBD3L1Q8WWY6 194 aa2.36□□□□□ -2.03
HMGB1P3-201ENST00000502802 PLEKHB2Q96CS7 222 aa2.36□□□□□ -2.03
HMGB1P3-201ENST00000502802 Q96M85 177 aa2.36□□□□□ -2.03
HMGB1P3-201ENST00000502802 PBDC1Q9BVG4 233 aa2.36□□□□□ -2.03
HMGB1P3-201ENST00000502802 PBOV1Q9GZY1 135 aa2.36□□□□□ -2.03
HMGB1P3-201ENST00000502802 SAR1AQ9NR31 198 aa2.36□□□□□ -2.03
HMGB1P3-201ENST00000502802 TMEM106BQ9NUM4 274 aa2.36□□□□□ -2.03
HMGB1P3-201ENST00000502802 PRNDQ9UKY0 176 aa2.36□□□□□ -2.03
HMGB1P3-201ENST00000502802 CYSLTR1Q9Y271 337 aa2.36□□□□□ -2.03
HMGB1P3-201ENST00000502802 MED31Q9Y3C7 131 aa2.36□□□□□ -2.03
HMGB1P3-201ENST00000502802 SOX21Q9Y651 276 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P3-201ENST00000502802 U3KQ87 197 aa2.36□□□□□ -2.03
HMGB1P3-201ENST00000502802 PNMA8CA0A1B0GUJ8 204 aa2.35□□□□□ -2.03
HMGB1P3-201ENST00000502802 RER1O15258 196 aa2.35□□□□□ -2.03
HMGB1P3-201ENST00000502802 PGLYRP1O75594 196 aaPredicted RBP2.35□□□□□ -2.03
HMGB1P3-201ENST00000502802 NDUFC2O95298 119 aa2.35□□□□□ -2.03
HMGB1P3-201ENST00000502802 CD14P08571 375 aa2.35□□□□□ -2.03
HMGB1P3-201ENST00000502802 SCTP09683 121 aa2.35□□□□□ -2.03
HMGB1P3-201ENST00000502802 FGF7P21781 194 aa2.35□□□□□ -2.03
HMGB1P3-201ENST00000502802 ETV6P41212 452 aa2.35□□□□□ -2.03
HMGB1P3-201ENST00000502802 GUCA1AP43080 201 aaPredicted RBP2.35□□□□□ -2.03
HMGB1P3-201ENST00000502802 ZNF80P51504 273 aaPredicted RBP2.35□□□□□ -2.03
HMGB1P3-201ENST00000502802 FXYD6P3P58550 94 aa2.35□□□□□ -2.03
HMGB1P3-201ENST00000502802 PCBD1P61457 104 aa2.35□□□□□ -2.03
HMGB1P3-201ENST00000502802 SUPT4H1P63272 117 aaKnown RBP2.35□□□□□ -2.03
HMGB1P3-201ENST00000502802 OR8B8Q15620 311 aa2.35□□□□□ -2.03
HMGB1P3-201ENST00000502802 SCGB2B2Q4G0G5 96 aa2.35□□□□□ -2.03
HMGB1P3-201ENST00000502802 TMEM155Q4W5P6 130 aa2.35□□□□□ -2.03
HMGB1P3-201ENST00000502802 GOLT1AQ6ZVE7 132 aa2.35□□□□□ -2.03
HMGB1P3-201ENST00000502802 OR5AS1Q8N127 324 aa2.35□□□□□ -2.03
HMGB1P3-201ENST00000502802 TEX29Q8N6K0 151 aa2.35□□□□□ -2.03
HMGB1P3-201ENST00000502802 TCTEX1D1Q8N7M0 179 aa2.35□□□□□ -2.03
HMGB1P3-201ENST00000502802 DCANP1Q8TF63 244 aa2.35□□□□□ -2.03
HMGB1P3-201ENST00000502802 THEM6Q8WUY1 208 aa2.35□□□□□ -2.03
HMGB1P3-201ENST00000502802 POP5Q969H6 163 aaKnown RBP2.35□□□□□ -2.03
HMGB1P3-201ENST00000502802 TMEM106AQ96A25 262 aa2.35□□□□□ -2.03
HMGB1P3-201ENST00000502802 ISOC1Q96CN7 298 aa2.35□□□□□ -2.03
HMGB1P3-201ENST00000502802 SCGB3A1Q96QR1 104 aa2.35□□□□□ -2.03
HMGB1P3-201ENST00000502802 CST9LQ9H4G1 147 aa2.35□□□□□ -2.03
HMGB1P3-201ENST00000502802 SLC39A9Q9NUM3 307 aa2.35□□□□□ -2.03
HMGB1P3-201ENST00000502802 NAT8BQ9UHF3 227 aa2.35□□□□□ -2.03
HMGB1P3-201ENST00000502802 LHFPL6Q9Y693 200 aa2.35□□□□□ -2.03
HMGB1P3-201ENST00000502802 NBEAL2Q6ZNJ1 2754 aa2.35□□□□□ -2.03
HMGB1P3-201ENST00000502802 DNAH9Q9NYC9 4486 aa2.34□□□□□ -2.03
HMGB1P3-201ENST00000502802 BBIP1A8MTZ0 92 aa2.34□□□□□ -2.03
HMGB1P3-201ENST00000502802 ZNF705FA8MVS1 300 aaPredicted RBP2.34□□□□□ -2.03
HMGB1P3-201ENST00000502802 IQCF6A8MYZ5 107 aa2.34□□□□□ -2.03
HMGB1P3-201ENST00000502802 BUB1B-PAK6H3BSN5 160 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms