RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 IGHV3-30-3P0DP02 117 aa13.13□□□□□ -0.31
HMGXB3-201ENST00000502717 TRBV7-3A0A075B6L6 115 aa13.13□□□□□ -0.31
HMGXB3-201ENST00000502717 TINCRA0A1B0GVN0 87 aa13.13□□□□□ -0.31
HMGXB3-201ENST00000502717 HHLA3Q9XRX5 114 aa13.13□□□□□ -0.31
HMGXB3-201ENST00000502717 TEX49A0A1B0GTD5 131 aa13.12□□□□□ -0.31
HMGXB3-201ENST00000502717 P0DMU3 169 aa13.12□□□□□ -0.31
HMGXB3-201ENST00000502717 FAM231AP0DMU4 169 aa13.12□□□□□ -0.31
HMGXB3-201ENST00000502717 FAM231CP0DMU5 169 aa13.12□□□□□ -0.31
HMGXB3-201ENST00000502717 RS1O15537 224 aa13.12□□□□□ -0.31
HMGXB3-201ENST00000502717 GRNP28799 593 aaKnown RBP13.12□□□□□ -0.31
HMGXB3-201ENST00000502717 INSL3P51460 131 aa13.12□□□□□ -0.31
HMGXB3-201ENST00000502717 XGP55808 180 aa13.12□□□□□ -0.31
HMGXB3-201ENST00000502717 PRORYQ9H606 182 aa13.12□□□□□ -0.31
HMGXB3-201ENST00000502717 A0A1B0GX51 115 aa13.12□□□□□ -0.31
HMGXB3-201ENST00000502717 VPREB3Q9UKI3 123 aa13.12□□□□□ -0.31
HMGXB3-201ENST00000502717 MDFICQ9P1T7 246 aa13.11□□□□□ -0.31
HMGXB3-201ENST00000502717 DSCAML1Q8TD84 2053 aa13.11□□□□□ -0.31
HMGXB3-201ENST00000502717 DOPEY1Q5JWR5 2465 aa13.11□□□□□ -0.31
HMGXB3-201ENST00000502717 A0A0J9YXY3 114 aa13.11□□□□□ -0.31
HMGXB3-201ENST00000502717 ORMDL1Q9P0S3 153 aa13.11□□□□□ -0.31
HMGXB3-201ENST00000502717 HAMPP81172 84 aa13.1□□□□□ -0.31
HMGXB3-201ENST00000502717 MIAQ16674 131 aa13.1□□□□□ -0.31
HMGXB3-201ENST00000502717 WDR87Q6ZQQ6 2873 aa13.1□□□□□ -0.31
HMGXB3-201ENST00000502717 DAD1P61803 113 aa13.1□□□□□ -0.31
HMGXB3-201ENST00000502717 IGHV3-33P01772 117 aa13.09□□□□□ -0.31
HMGXB3-201ENST00000502717 NRACQ8N912 160 aa13.09□□□□□ -0.31
HMGXB3-201ENST00000502717 LRP4O75096 1905 aa13.09□□□□□ -0.31
HMGXB3-201ENST00000502717 CNFNQ9BYD5 112 aa13.09□□□□□ -0.31
HMGXB3-201ENST00000502717 DAND5Q8N907 189 aa13.08□□□□□ -0.32
HMGXB3-201ENST00000502717 OPRPNQ99935 248 aaPredicted RBP13.08□□□□□ -0.32
HMGXB3-201ENST00000502717 DEFB130BP0DP73 79 aa13.08□□□□□ -0.32
HMGXB3-201ENST00000502717 DEFB130AP0DP74 79 aa13.08□□□□□ -0.32
HMGXB3-201ENST00000502717 AJUBAQ96IF1 538 aa13.08□□□□□ -0.32
HMGXB3-201ENST00000502717 TRBV30A0A0K0K1B3 111 aa13.08□□□□□ -0.32
HMGXB3-201ENST00000502717 C5orf56Q8N8D9 126 aa13.08□□□□□ -0.32
HMGXB3-201ENST00000502717 CRLF1O75462 422 aa13.07□□□□□ -0.32
HMGXB3-201ENST00000502717 SMAD5-AS1Q9Y6J3 95 aa13.07□□□□□ -0.32
HMGXB3-201ENST00000502717 IGF2RP11717 2491 aa13.07□□□□□ -0.32
HMGXB3-201ENST00000502717 UQCRQO14949 82 aa13.07□□□□□ -0.32
HMGXB3-201ENST00000502717 IGHV3-30P01768 117 aa13.07□□□□□ -0.32
HMGXB3-201ENST00000502717 IGHV3-30-5P0DP03 117 aa13.07□□□□□ -0.32
HMGXB3-201ENST00000502717 SND1-IT1Q9HBX3 110 aa13.07□□□□□ -0.32
HMGXB3-201ENST00000502717 ADORA2A-AS1P86434 159 aa13.06□□□□□ -0.32
HMGXB3-201ENST00000502717 VSIG2Q96IQ7 327 aa13.06□□□□□ -0.32
HMGXB3-201ENST00000502717 DEFB112Q30KQ8 113 aa13.06□□□□□ -0.32
HMGXB3-201ENST00000502717 IGKV3D-7A0A0C4DH55 119 aa13.06□□□□□ -0.32
HMGXB3-201ENST00000502717 K7EMT4 169 aa13.06□□□□□ -0.32
HMGXB3-201ENST00000502717 MRAPQ8TCY5 172 aa13.06□□□□□ -0.32
HMGXB3-201ENST00000502717 HIVEP3Q5T1R4 2406 aa13.06□□□□□ -0.32
HMGXB3-201ENST00000502717 IGHV4-61A0A0C4DH41 118 aa13.06□□□□□ -0.32
HMGXB3-201ENST00000502717 F5H768 121 aa13.06□□□□□ -0.32
HMGXB3-201ENST00000502717 DEFB1P60022 68 aa13.06□□□□□ -0.32
HMGXB3-201ENST00000502717 Q8NA96 180 aa13.06□□□□□ -0.32
HMGXB3-201ENST00000502717 IGHV4-30-2A0A087WSY4 118 aa13.05□□□□□ -0.32
HMGXB3-201ENST00000502717 TNRC6BQ9UPQ9 1833 aaKnown RBP13.05□□□□□ -0.32
HMGXB3-201ENST00000502717 TMEM223A0PJW6 202 aa13.05□□□□□ -0.32
HMGXB3-201ENST00000502717 FBXL19-AS1Q494R0 122 aa13.05□□□□□ -0.32
HMGXB3-201ENST00000502717 C9orf66Q5T8R8 295 aa13.05□□□□□ -0.32
HMGXB3-201ENST00000502717 NFE4Q86UQ8 179 aa13.05□□□□□ -0.32
HMGXB3-201ENST00000502717 CCDC140Q96MF4 163 aa13.05□□□□□ -0.32
HMGXB3-201ENST00000502717 WNK1Q9H4A3 2382 aa13.05□□□□□ -0.32
HMGXB3-201ENST00000502717 A0A096LNJ9 63 aa13.05□□□□□ -0.32
HMGXB3-201ENST00000502717 U3KQE9 123 aa13.05□□□□□ -0.32
HMGXB3-201ENST00000502717 COL5A1P20908 1838 aaPredicted RBP13.04□□□□□ -0.32
HMGXB3-201ENST00000502717 NXPH4O95158 308 aa13.04□□□□□ -0.32
HMGXB3-201ENST00000502717 C10orf105Q8TEF2 133 aa13.04□□□□□ -0.32
HMGXB3-201ENST00000502717 DSCR8Q96T75 97 aa13.04□□□□□ -0.32
HMGXB3-201ENST00000502717 ABCA2Q9BZC7 2435 aa13.04□□□□□ -0.32
HMGXB3-201ENST00000502717 HOXD3P31249 432 aaPredicted RBP13.03□□□□□ -0.32
HMGXB3-201ENST00000502717 ODF3BA8MYP8 253 aa13.03□□□□□ -0.32
HMGXB3-201ENST00000502717 TRIAP1O43715 76 aa13.03□□□□□ -0.32
HMGXB3-201ENST00000502717 ZNF22P17026 224 aaPredicted RBP13.03□□□□□ -0.32
HMGXB3-201ENST00000502717 RNF152Q8N8N0 203 aa13.03□□□□□ -0.32
HMGXB3-201ENST00000502717 GAS8-AS1O95177 125 aa13.03□□□□□ -0.32
HMGXB3-201ENST00000502717 IGHV4-4A0A075B6R2 117 aa13.02□□□□□ -0.32
HMGXB3-201ENST00000502717 COX7A2LO14548 114 aa13.02□□□□□ -0.32
HMGXB3-201ENST00000502717 LY6LH3BQJ8 138 aa13.02□□□□□ -0.32
HMGXB3-201ENST00000502717 RMI2Q96E14 147 aa13.02□□□□□ -0.33
HMGXB3-201ENST00000502717 ZFAND3Q9H8U3 227 aa13.02□□□□□ -0.33
HMGXB3-201ENST00000502717 UNQ9165/PRO28630Q6UXU0 137 aa13.01□□□□□ -0.33
HMGXB3-201ENST00000502717 TANC2Q9HCD6 1990 aa13.01□□□□□ -0.33
HMGXB3-201ENST00000502717 TRAV4A0A0B4J268 109 aa13.01□□□□□ -0.33
HMGXB3-201ENST00000502717 IGHV4-59P01825 116 aa13.01□□□□□ -0.33
HMGXB3-201ENST00000502717 CFHR3Q02985 330 aa13□□□□□ -0.33
HMGXB3-201ENST00000502717 MRPS12O15235 138 aaKnown RBP13□□□□□ -0.33
HMGXB3-201ENST00000502717 FSTL3O95633 263 aa13□□□□□ -0.33
HMGXB3-201ENST00000502717 Q6Q795 121 aa13□□□□□ -0.33
HMGXB3-201ENST00000502717 IMUPQ9GZP8 106 aa13□□□□□ -0.33
HMGXB3-201ENST00000502717 C3orf22Q8N5N4 141 aa13□□□□□ -0.33
HMGXB3-201ENST00000502717 ZFAND2AQ8N6M9 145 aa12.99□□□□□ -0.33
HMGXB3-201ENST00000502717 LRRC75A-AS1Q8N1F1 130 aa12.99□□□□□ -0.33
HMGXB3-201ENST00000502717 RBM3P98179 157 aaKnown RBP12.99□□□□□ -0.33
HMGXB3-201ENST00000502717 CCL24O00175 119 aa12.99□□□□□ -0.33
HMGXB3-201ENST00000502717 DAZ2Q13117 558 aaKnown RBP12.99□□□□□ -0.33
HMGXB3-201ENST00000502717 DAZ4Q86SG3 579 aaKnown RBP12.99□□□□□ -0.33
HMGXB3-201ENST00000502717 SIRPDQ9H106 197 aa12.99□□□□□ -0.33
HMGXB3-201ENST00000502717 DAZ3Q9NR90 486 aaKnown RBP12.99□□□□□ -0.33
HMGXB3-201ENST00000502717 C11orf21Q9P2W6 132 aa12.99□□□□□ -0.33
HMGXB3-201ENST00000502717 UBE2D1P51668 147 aa12.98□□□□□ -0.33
HMGXB3-201ENST00000502717 GPHB5Q86YW7 130 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms