RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 DNAH10Q8IVF4 4471 aa11.41□□□□□ -0.58
PRKCB-210ENST00000498739 A0A087WWC5 75 aa11.41□□□□□ -0.58
PRKCB-210ENST00000498739 IGHV3-38A0A0C4DH36 116 aa11.41□□□□□ -0.58
PRKCB-210ENST00000498739 DNAH10OSP0CZ25 163 aa11.41□□□□□ -0.58
PRKCB-210ENST00000498739 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.41□□□□□ -0.58
PRKCB-210ENST00000498739 TNFRSF18Q9Y5U5 241 aa11.41□□□□□ -0.58
PRKCB-210ENST00000498739 TRAV9-2A0A087WT02 112 aa11.4□□□□□ -0.58
PRKCB-210ENST00000498739 SMIM27A0A1W2PRY6 76 aa11.4□□□□□ -0.58
PRKCB-210ENST00000498739 RIGQ13278 110 aa11.4□□□□□ -0.58
PRKCB-210ENST00000498739 RASL11AQ6T310 242 aa11.4□□□□□ -0.58
PRKCB-210ENST00000498739 LINC00336Q6ZUF6 198 aa11.4□□□□□ -0.58
PRKCB-210ENST00000498739 DNAJC30Q96LL9 226 aa11.4□□□□□ -0.58
PRKCB-210ENST00000498739 DNAH2Q9P225 4427 aa11.4□□□□□ -0.58
PRKCB-210ENST00000498739 TRAV26-2A0A0B4J265 109 aa11.39□□□□□ -0.59
PRKCB-210ENST00000498739 TMEM218A2RU14 115 aa11.39□□□□□ -0.59
PRKCB-210ENST00000498739 F8W036 122 aa11.39□□□□□ -0.59
PRKCB-210ENST00000498739 PRSS29PA6NIE9 313 aa11.38□□□□□ -0.59
PRKCB-210ENST00000498739 PPP1R2P9O14990 202 aa11.38□□□□□ -0.59
PRKCB-210ENST00000498739 IGHV3-30P01768 117 aa11.38□□□□□ -0.59
PRKCB-210ENST00000498739 IGHV3-33P01772 117 aa11.38□□□□□ -0.59
PRKCB-210ENST00000498739 IGHV3-30-3P0DP02 117 aa11.38□□□□□ -0.59
PRKCB-210ENST00000498739 IGHV3-30-5P0DP03 117 aa11.38□□□□□ -0.59
PRKCB-210ENST00000498739 ADCYAP1P18509 176 aa11.38□□□□□ -0.59
PRKCB-210ENST00000498739 LINC01556Q5JQF7 62 aa11.38□□□□□ -0.59
PRKCB-210ENST00000498739 GATD1Q8NB37 220 aa11.38□□□□□ -0.59
PRKCB-210ENST00000498739 NIT2Q9NQR4 276 aa11.38□□□□□ -0.59
PRKCB-210ENST00000498739 LINC00862A6NCI5 91 aa11.37□□□□□ -0.59
PRKCB-210ENST00000498739 K7EP13 123 aa11.37□□□□□ -0.59
PRKCB-210ENST00000498739 DAZ4Q86SG3 579 aaKnown RBP11.37□□□□□ -0.59
PRKCB-210ENST00000498739 TMEM191AQ9H0A3 160 aa11.37□□□□□ -0.59
PRKCB-210ENST00000498739 DAZ3Q9NR90 486 aaKnown RBP11.37□□□□□ -0.59
PRKCB-210ENST00000498739 MT-ND4LP03901 98 aa11.36□□□□□ -0.59
PRKCB-210ENST00000498739 C10orf126Q8N4M7 172 aa11.36□□□□□ -0.59
PRKCB-210ENST00000498739 ANAPC16Q96DE5 110 aa11.36□□□□□ -0.59
PRKCB-210ENST00000498739 TRBV6-8A0A0A6YYG3 113 aa11.35□□□□□ -0.59
PRKCB-210ENST00000498739 BTF3P20290 206 aaKnown RBP11.35□□□□□ -0.59
PRKCB-210ENST00000498739 Q8N3U1 123 aa11.35□□□□□ -0.59
PRKCB-210ENST00000498739 CAMPP49913 170 aa11.34□□□□□ -0.59
PRKCB-210ENST00000498739 TMEM97Q5BJF2 176 aa11.34□□□□□ -0.59
PRKCB-210ENST00000498739 MRPL54Q6P161 138 aaKnown RBP11.34□□□□□ -0.59
PRKCB-210ENST00000498739 AMN1Q8IY45 258 aa11.34□□□□□ -0.59
PRKCB-210ENST00000498739 FRZBQ92765 325 aa11.34□□□□□ -0.59
PRKCB-210ENST00000498739 RPL39LQ96EH5 51 aaKnown RBP11.34□□□□□ -0.59
PRKCB-210ENST00000498739 RNF185Q96GF1 192 aa11.34□□□□□ -0.59
PRKCB-210ENST00000498739 SEC11CQ9BY50 192 aa11.34□□□□□ -0.59
PRKCB-210ENST00000498739 URGCP-MRPS24S4R325 110 aa11.34□□□□□ -0.59
PRKCB-210ENST00000498739 FRAS1Q86XX4 4008 aa11.34□□□□□ -0.59
PRKCB-210ENST00000498739 RAB4AP20338 218 aa11.33□□□□□ -0.6
PRKCB-210ENST00000498739 NTM-AS1Q6ZSK4 140 aa11.33□□□□□ -0.6
PRKCB-210ENST00000498739 NIT1Q86X76 327 aa11.33□□□□□ -0.6
PRKCB-210ENST00000498739 EPPK1P58107 5090 aaKnown RBP11.32□□□□□ -0.6
PRKCB-210ENST00000498739 A0A1B0GW15 77 aa11.32□□□□□ -0.6
PRKCB-210ENST00000498739 TNP2Q05952 138 aa11.32□□□□□ -0.6
PRKCB-210ENST00000498739 KCNIP4Q6PIL6 250 aa11.32□□□□□ -0.6
PRKCB-210ENST00000498739 CHCHD5Q9BSY4 110 aa11.32□□□□□ -0.6
PRKCB-210ENST00000498739 DNAH17Q9UFH2 4485 aa11.31□□□□□ -0.6
PRKCB-210ENST00000498739 TRBV25-1A0A075B6N4 114 aa11.31□□□□□ -0.6
PRKCB-210ENST00000498739 A0A087WX48 190 aa11.31□□□□□ -0.6
PRKCB-210ENST00000498739 IBA57-AS1B1ANH7 110 aa11.31□□□□□ -0.6
PRKCB-210ENST00000498739 HBBP68871 147 aa11.31□□□□□ -0.6
PRKCB-210ENST00000498739 NFE4Q86UQ8 179 aa11.31□□□□□ -0.6
PRKCB-210ENST00000498739 DEFB104AQ8WTQ1 72 aa11.31□□□□□ -0.6
PRKCB-210ENST00000498739 MRAP2Q96G30 205 aa11.31□□□□□ -0.6
PRKCB-210ENST00000498739 IGHV1-24A0A0C4DH33 117 aa11.3□□□□□ -0.6
PRKCB-210ENST00000498739 TMEM262E9PQX1 116 aa11.3□□□□□ -0.6
PRKCB-210ENST00000498739 GAS8-AS1O95177 125 aa11.3□□□□□ -0.6
PRKCB-210ENST00000498739 S100A8P05109 93 aa11.3□□□□□ -0.6
PRKCB-210ENST00000498739 Q9HAA7 133 aa11.3□□□□□ -0.6
PRKCB-210ENST00000498739 FAT2Q9NYQ8 4349 aa11.29□□□□□ -0.6
PRKCB-210ENST00000498739 A0A1B0GXF2 115 aa11.29□□□□□ -0.6
PRKCB-210ENST00000498739 SMKR1H3BMG3 65 aa11.29□□□□□ -0.6
PRKCB-210ENST00000498739 NCR2O95944 276 aa11.29□□□□□ -0.6
PRKCB-210ENST00000498739 COTL1Q14019 142 aa11.29□□□□□ -0.6
PRKCB-210ENST00000498739 FAM104BQ5XKR9 115 aa11.29□□□□□ -0.6
PRKCB-210ENST00000498739 Q6ZRN7 208 aaPredicted RBP11.29□□□□□ -0.6
PRKCB-210ENST00000498739 CHCHD7Q9BUK0 85 aa11.29□□□□□ -0.6
PRKCB-210ENST00000498739 TRBV6-5A0A0K0K1A5 114 aa11.28□□□□□ -0.6
PRKCB-210ENST00000498739 A0A1B0GVY2 172 aa11.28□□□□□ -0.6
PRKCB-210ENST00000498739 SDHAF1A6NFY7 115 aa11.28□□□□□ -0.6
PRKCB-210ENST00000498739 IQCJQ1A5X6 159 aa11.28□□□□□ -0.6
PRKCB-210ENST00000498739 ATP5L2Q7Z4Y8 100 aa11.28□□□□□ -0.6
PRKCB-210ENST00000498739 RPS10P46783 165 aaKnown RBP11.27□□□□□ -0.61
PRKCB-210ENST00000498739 AMTP48728 403 aa11.27□□□□□ -0.61
PRKCB-210ENST00000498739 PKIAP61925 76 aa11.27□□□□□ -0.61
PRKCB-210ENST00000498739 GAGE6Q13070 117 aa11.27□□□□□ -0.61
PRKCB-210ENST00000498739 LAGE3Q14657 143 aa11.27□□□□□ -0.61
PRKCB-210ENST00000498739 MRPL51Q4U2R6 128 aaKnown RBP11.27□□□□□ -0.61
PRKCB-210ENST00000498739 MPV17L2Q567V2 206 aa11.27□□□□□ -0.61
PRKCB-210ENST00000498739 C10orf91Q5T1B1 145 aa11.27□□□□□ -0.61
PRKCB-210ENST00000498739 CTDSP1Q9GZU7 261 aa11.27□□□□□ -0.61
PRKCB-210ENST00000498739 ST20Q9HBF5 79 aa11.27□□□□□ -0.61
PRKCB-210ENST00000498739 KLK12Q9UKR0 248 aa11.27□□□□□ -0.61
PRKCB-210ENST00000498739 ELOBQ15370 118 aa11.26□□□□□ -0.61
PRKCB-210ENST00000498739 TMEM243Q9BU79 118 aa11.26□□□□□ -0.61
PRKCB-210ENST00000498739 CARHSP1Q9Y2V2 147 aaKnown RBP11.26□□□□□ -0.61
PRKCB-210ENST00000498739 PMCHP20382 165 aa11.25□□□□□ -0.61
PRKCB-210ENST00000498739 ATRAIDQ6UW56 229 aa11.25□□□□□ -0.61
PRKCB-210ENST00000498739 BTF3L4Q96K17 158 aa11.25□□□□□ -0.61
PRKCB-210ENST00000498739 TMEM70Q9BUB7 260 aa11.25□□□□□ -0.61
PRKCB-210ENST00000498739 TRAV8-3A0A0A6YYJ7 113 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms