RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 ATP6V0CP27449 155 aa8.8□□□□□ -1
CCDC58-207ENST00000498466 PRR27Q6MZM9 219 aa8.8□□□□□ -1
CCDC58-207ENST00000498466 NTM-AS1Q6ZSK4 140 aa8.8□□□□□ -1
CCDC58-207ENST00000498466 DERL1Q9BUN8 251 aa8.8□□□□□ -1
CCDC58-207ENST00000498466 PLAC8Q9NZF1 115 aa8.8□□□□□ -1
CCDC58-207ENST00000498466 ZFP30Q9Y2G7 519 aa8.8□□□□□ -1
CCDC58-207ENST00000498466 TRBV25-1A0A075B6N4 114 aa8.79□□□□□ -1
CCDC58-207ENST00000498466 GAS8-AS1O95177 125 aa8.79□□□□□ -1
CCDC58-207ENST00000498466 SERF2P84101 59 aa8.79□□□□□ -1
CCDC58-207ENST00000498466 REG3AQ06141 175 aa8.79□□□□□ -1
CCDC58-207ENST00000498466 COX8CQ7Z4L0 72 aa8.79□□□□□ -1
CCDC58-207ENST00000498466 GTSF1Q8WW33 167 aa8.79□□□□□ -1
CCDC58-207ENST00000498466 HIST1H2BAQ96A08 127 aa8.79□□□□□ -1
CCDC58-207ENST00000498466 TRBV6-1A0A0K0K1D8 114 aa8.78□□□□□ -1
CCDC58-207ENST00000498466 F5H697 171 aa8.78□□□□□ -1
CCDC58-207ENST00000498466 SLPIP03973 132 aa8.78□□□□□ -1
CCDC58-207ENST00000498466 UBE2G1P62253 170 aa8.78□□□□□ -1
CCDC58-207ENST00000498466 ZNF674Q2M3X9 581 aa8.78□□□□□ -1
CCDC58-207ENST00000498466 WDR73Q6P4I2 378 aa8.78□□□□□ -1
CCDC58-207ENST00000498466 TNFSF18Q9UNG2 199 aa8.78□□□□□ -1
CCDC58-207ENST00000498466 A0A0J9YXV3 536 aa8.77□□□□□ -1.01
CCDC58-207ENST00000498466 A6NHS1 94 aa8.77□□□□□ -1.01
CCDC58-207ENST00000498466 RAB5CP51148 216 aa8.77□□□□□ -1.01
CCDC58-207ENST00000498466 PRR3P79522 188 aaKnown RBP8.77□□□□□ -1.01
CCDC58-207ENST00000498466 OR10AG1Q8NH19 301 aa8.77□□□□□ -1.01
CCDC58-207ENST00000498466 FMC1Q96HJ9 113 aa8.77□□□□□ -1.01
CCDC58-207ENST00000498466 NKX6-2Q9C056 277 aaPredicted RBP8.77□□□□□ -1.01
CCDC58-207ENST00000498466 VAX2Q9UIW0 290 aa8.77□□□□□ -1.01
CCDC58-207ENST00000498466 TRAV8-4A0A0B4J246 113 aa8.76□□□□□ -1.01
CCDC58-207ENST00000498466 FAM74A7A6NL05 159 aa8.76□□□□□ -1.01
CCDC58-207ENST00000498466 P01737 135 aa8.76□□□□□ -1.01
CCDC58-207ENST00000498466 MARVELD1Q9BSK0 173 aa8.76□□□□□ -1.01
CCDC58-207ENST00000498466 ZNF471Q9BX82 626 aaPredicted RBP8.76□□□□□ -1.01
CCDC58-207ENST00000498466 IGHV1-24A0A0C4DH33 117 aa8.75□□□□□ -1.01
CCDC58-207ENST00000498466 UPK1BO75841 260 aa8.75□□□□□ -1.01
CCDC58-207ENST00000498466 COX6A2Q02221 97 aa8.75□□□□□ -1.01
CCDC58-207ENST00000498466 IQCJQ1A5X6 159 aa8.75□□□□□ -1.01
CCDC58-207ENST00000498466 MAJINQ3KP22 176 aa8.75□□□□□ -1.01
CCDC58-207ENST00000498466 S100ZQ8WXG8 99 aa8.75□□□□□ -1.01
CCDC58-207ENST00000498466 IGKV2-24A0A0C4DH68 120 aa8.74□□□□□ -1.01
CCDC58-207ENST00000498466 MUC21A0A0G2JKD1 596 aa8.74□□□□□ -1.01
CCDC58-207ENST00000498466 MUC21A0A140T8X8 626 aa8.74□□□□□ -1.01
CCDC58-207ENST00000498466 CTXND1A0A1B0GTU2 59 aa8.74□□□□□ -1.01
CCDC58-207ENST00000498466 LTAP01374 205 aa8.74□□□□□ -1.01
CCDC58-207ENST00000498466 GZMBP10144 247 aa8.74□□□□□ -1.01
CCDC58-207ENST00000498466 DEFA3P59666 94 aa8.74□□□□□ -1.01
CCDC58-207ENST00000498466 KRTAP10-8P60410 259 aa8.74□□□□□ -1.01
CCDC58-207ENST00000498466 SSTP61278 116 aa8.74□□□□□ -1.01
CCDC58-207ENST00000498466 ZNF726P1Q15940 193 aa8.74□□□□□ -1.01
CCDC58-207ENST00000498466 SPANXN1Q5VSR9 72 aa8.74□□□□□ -1.01
CCDC58-207ENST00000498466 REG3GQ6UW15 175 aa8.74□□□□□ -1.01
CCDC58-207ENST00000498466 C20orf203Q8NBC4 194 aa8.74□□□□□ -1.01
CCDC58-207ENST00000498466 LYPD6BQ8NI32 183 aa8.74□□□□□ -1.01
CCDC58-207ENST00000498466 LPAP08519 4548 aa8.74□□□□□ -1.01
CCDC58-207ENST00000498466 SMIM17P0DL12 118 aa8.73□□□□□ -1.01
CCDC58-207ENST00000498466 XP32Q5T750 250 aa8.73□□□□□ -1.01
CCDC58-207ENST00000498466 STPG4Q8N801 248 aa8.73□□□□□ -1.01
CCDC58-207ENST00000498466 IGLV4-60A0A075B6I1 120 aa8.72□□□□□ -1.01
CCDC58-207ENST00000498466 NDUFS6O75380 124 aaKnown RBP8.72□□□□□ -1.01
CCDC58-207ENST00000498466 IFITM3Q01628 133 aa8.72□□□□□ -1.01
CCDC58-207ENST00000498466 SPINK6Q6UWN8 80 aa8.72□□□□□ -1.01
CCDC58-207ENST00000498466 LINC00299Q6ZSB3 139 aa8.72□□□□□ -1.01
CCDC58-207ENST00000498466 AQP10Q96PS8 301 aa8.72□□□□□ -1.01
CCDC58-207ENST00000498466 NDUFA13Q9P0J0 144 aa8.72□□□□□ -1.01
CCDC58-207ENST00000498466 SNAI2O43623 268 aa8.71□□□□□ -1.02
CCDC58-207ENST00000498466 CXCL1P09341 107 aa8.71□□□□□ -1.02
CCDC58-207ENST00000498466 RPS10P46783 165 aaKnown RBP8.71□□□□□ -1.02
CCDC58-207ENST00000498466 CFAP161Q6P656 301 aa8.71□□□□□ -1.02
CCDC58-207ENST00000498466 PRSS3P2Q8NHM4 247 aa8.71□□□□□ -1.02
CCDC58-207ENST00000498466 GFRA4Q9GZZ7 299 aa8.71□□□□□ -1.02
CCDC58-207ENST00000498466 A0A1B0GUV1 79 aa8.7□□□□□ -1.02
CCDC58-207ENST00000498466 AKR1C3P42330 323 aa8.7□□□□□ -1.02
CCDC58-207ENST00000498466 SULT1A2P50226 295 aa8.7□□□□□ -1.02
CCDC58-207ENST00000498466 HIGD2BQ4VC39 106 aa8.7□□□□□ -1.02
CCDC58-207ENST00000498466 CST9LP1Q5W188 147 aa8.7□□□□□ -1.02
CCDC58-207ENST00000498466 C15orf56Q8N910 161 aa8.7□□□□□ -1.02
CCDC58-207ENST00000498466 STOML3Q8TAV4 291 aa8.7□□□□□ -1.02
CCDC58-207ENST00000498466 AP1S3Q96PC3 154 aa8.7□□□□□ -1.02
CCDC58-207ENST00000498466 TMEM243Q9BU79 118 aa8.7□□□□□ -1.02
CCDC58-207ENST00000498466 SSBP4Q9BWG4 385 aaPredicted RBP8.7□□□□□ -1.02
CCDC58-207ENST00000498466 MGPP08493 103 aa8.69□□□□□ -1.02
CCDC58-207ENST00000498466 OR5AL1P0C617 328 aa8.69□□□□□ -1.02
CCDC58-207ENST00000498466 RPL7L1Q6DKI1 246 aaKnown RBP8.69□□□□□ -1.02
CCDC58-207ENST00000498466 TCEAL7Q9BRU2 100 aa8.69□□□□□ -1.02
CCDC58-207ENST00000498466 BORCS7-ASMTA0A0B4J1R7 106 aa8.68□□□□□ -1.02
CCDC58-207ENST00000498466 GAGE12HA6NDE8 117 aa8.68□□□□□ -1.02
CCDC58-207ENST00000498466 UBE2L6O14933 153 aa8.68□□□□□ -1.02
CCDC58-207ENST00000498466 AKR1C8PQ5T2L2 129 aa8.68□□□□□ -1.02
CCDC58-207ENST00000498466 IGKV3OR2-268A0A0C4DH90 116 aa8.67□□□□□ -1.02
CCDC58-207ENST00000498466 MAP1LC3B2A6NCE7 125 aa8.67□□□□□ -1.02
CCDC58-207ENST00000498466 H7C1H1 209 aa8.67□□□□□ -1.02
CCDC58-207ENST00000498466 M0QY20 66 aa8.67□□□□□ -1.02
CCDC58-207ENST00000498466 FHITP49789 147 aa8.67□□□□□ -1.02
CCDC58-207ENST00000498466 NKX2-5P52952 324 aaPredicted RBP8.67□□□□□ -1.02
CCDC58-207ENST00000498466 MAP1LC3BQ9GZQ8 125 aa8.67□□□□□ -1.02
CCDC58-207ENST00000498466 A0A096LNI7 61 aa8.66□□□□□ -1.02
CCDC58-207ENST00000498466 DEFA1P59665 94 aa8.66□□□□□ -1.02
CCDC58-207ENST00000498466 SUMO4Q6EEV6 95 aa8.66□□□□□ -1.02
CCDC58-207ENST00000498466 INO80EQ8NBZ0 244 aaPredicted RBP8.66□□□□□ -1.02
CCDC58-207ENST00000498466 SRSF9Q13242 221 aaKnown RBP eCLIP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 253.6 ms