RNA–Protein interactions for RNA: ENST00000498284.1

PTPRK-215, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 524 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-215ENST00000498284 Q96M85 177 aa1.47□□□□□ -2.17
PTPRK-215ENST00000498284 CCDC32Q9BV29 185 aa1.47□□□□□ -2.17
PTPRK-215ENST00000498284 SLC39A9Q9NUM3 307 aa1.47□□□□□ -2.17
PTPRK-215ENST00000498284 A0A1B0GX51 115 aa1.46□□□□□ -2.18
PTPRK-215ENST00000498284 ATP6V1G2-DDX39BF2Z307 99 aa1.46□□□□□ -2.18
PTPRK-215ENST00000498284 SDCBPO00560 298 aaPredicted RBP1.46□□□□□ -2.18
PTPRK-215ENST00000498284 DEGS1O15121 323 aa1.46□□□□□ -2.18
PTPRK-215ENST00000498284 OGNP20774 298 aaKnown RBP1.46□□□□□ -2.18
PTPRK-215ENST00000498284 KDELR1P24390 212 aa1.46□□□□□ -2.18
PTPRK-215ENST00000498284 DYNLT3P51808 116 aa1.46□□□□□ -2.18
PTPRK-215ENST00000498284 GTF2A1P52655 376 aaPredicted RBP1.46□□□□□ -2.18
PTPRK-215ENST00000498284 DYNLT1P63172 113 aa1.46□□□□□ -2.18
PTPRK-215ENST00000498284 PLCXD2Q0VAA5 305 aa1.46□□□□□ -2.18
PTPRK-215ENST00000498284 SPCS2Q15005 226 aa1.46□□□□□ -2.18
PTPRK-215ENST00000498284 ELOBQ15370 118 aa1.46□□□□□ -2.18
PTPRK-215ENST00000498284 NNATQ16517 81 aa1.46□□□□□ -2.18
PTPRK-215ENST00000498284 LYRM7Q5U5X0 104 aa1.46□□□□□ -2.18
PTPRK-215ENST00000498284 Q6ZSA8 131 aa1.46□□□□□ -2.18
PTPRK-215ENST00000498284 FP248Q71RG6 208 aaPredicted RBP1.46□□□□□ -2.18
PTPRK-215ENST00000498284 HIST3H2BBQ8N257 126 aa1.46□□□□□ -2.18
PTPRK-215ENST00000498284 NUP35Q8NFH5 326 aa1.46□□□□□ -2.18
PTPRK-215ENST00000498284 OR8B3Q8NGG8 313 aa1.46□□□□□ -2.18
PTPRK-215ENST00000498284 OR8D4Q8NGM9 314 aa1.46□□□□□ -2.18
PTPRK-215ENST00000498284 LZICQ8WZA0 190 aa1.46□□□□□ -2.18
PTPRK-215ENST00000498284 TEX37Q96LM6 180 aa1.46□□□□□ -2.18
PTPRK-215ENST00000498284 SLC25A21Q9BQT8 299 aaPredicted RBP1.46□□□□□ -2.18
PTPRK-215ENST00000498284 IMUPQ9GZP8 106 aa1.46□□□□□ -2.18
PTPRK-215ENST00000498284 POPDC3Q9HBV1 291 aa1.46□□□□□ -2.18
PTPRK-215ENST00000498284 DYNLRB1Q9NP97 96 aa1.46□□□□□ -2.18
PTPRK-215ENST00000498284 NIT2Q9NQR4 276 aa1.46□□□□□ -2.18
PTPRK-215ENST00000498284 KMT2AQ03164 3969 aa1.46□□□□□ -2.18
PTPRK-215ENST00000498284 HUWE1Q7Z6Z7 4374 aaKnown RBP1.45□□□□□ -2.18
PTPRK-215ENST00000498284 IGKV1D-42A0A075B6H8 117 aa1.45□□□□□ -2.18
PTPRK-215ENST00000498284 LOC107984640A0A0U1RRK4 108 aa1.45□□□□□ -2.18
PTPRK-215ENST00000498284 A0A1B0GV90 55 aa1.45□□□□□ -2.18
PTPRK-215ENST00000498284 LINC00587B1AMM8 73 aa1.45□□□□□ -2.18
PTPRK-215ENST00000498284 F8W036 122 aa1.45□□□□□ -2.18
PTPRK-215ENST00000498284 LYNX1G3V0Z9 82 aa1.45□□□□□ -2.18
PTPRK-215ENST00000498284 M0QZK8 103 aa1.45□□□□□ -2.18
PTPRK-215ENST00000498284 M0R233 179 aa1.45□□□□□ -2.18
PTPRK-215ENST00000498284 PROSCO94903 275 aa1.45□□□□□ -2.18
PTPRK-215ENST00000498284 APOA2P02652 100 aa1.45□□□□□ -2.18
PTPRK-215ENST00000498284 UBBP0CG47 229 aa1.45□□□□□ -2.18
PTPRK-215ENST00000498284 MPC1LP0DKB6 136 aa1.45□□□□□ -2.18
PTPRK-215ENST00000498284 LYNX1P0DP58 116 aa1.45□□□□□ -2.18
PTPRK-215ENST00000498284 S100A4P26447 101 aaKnown RBP1.45□□□□□ -2.18
PTPRK-215ENST00000498284 RPL22P35268 128 aaKnown RBP1.45□□□□□ -2.18
PTPRK-215ENST00000498284 RAB5CP51148 216 aa1.45□□□□□ -2.18
PTPRK-215ENST00000498284 FXYD2P54710 66 aa1.45□□□□□ -2.18
PTPRK-215ENST00000498284 UBE2BP63146 152 aa1.45□□□□□ -2.18
PTPRK-215ENST00000498284 RTL8BQ17RB0 113 aa1.45□□□□□ -2.18
PTPRK-215ENST00000498284 C1orf140Q5VVS0 124 aa1.45□□□□□ -2.18
PTPRK-215ENST00000498284 DEFB108BQ8NET1 73 aa1.45□□□□□ -2.18
PTPRK-215ENST00000498284 OR9Q1Q8NGQ5 310 aa1.45□□□□□ -2.18
PTPRK-215ENST00000498284 AQP3Q92482 292 aa1.45□□□□□ -2.18
PTPRK-215ENST00000498284 PFDN5Q99471 154 aa1.45□□□□□ -2.18
PTPRK-215ENST00000498284 TMEM70Q9BUB7 260 aa1.45□□□□□ -2.18
PTPRK-215ENST00000498284 RTL8AQ9BWD3 113 aa1.45□□□□□ -2.18
PTPRK-215ENST00000498284 TMEM126AQ9H061 195 aa1.45□□□□□ -2.18
PTPRK-215ENST00000498284 OSTCQ9NRP0 149 aa1.45□□□□□ -2.18
PTPRK-215ENST00000498284 BAIAP2Q9UQB8 552 aa1.45□□□□□ -2.18
PTPRK-215ENST00000498284 NUBP2Q9Y5Y2 271 aa1.45□□□□□ -2.18
PTPRK-215ENST00000498284 DNAH10Q8IVF4 4471 aa1.44□□□□□ -2.18
PTPRK-215ENST00000498284 A0A087X0T9 212 aa1.44□□□□□ -2.18
PTPRK-215ENST00000498284 TRAV3A0A0B4J244 114 aa1.44□□□□□ -2.18
PTPRK-215ENST00000498284 PMP2P02689 132 aa1.44□□□□□ -2.18
PTPRK-215ENST00000498284 MT-ND4LP03901 98 aa1.44□□□□□ -2.18
PTPRK-215ENST00000498284 METTL15P1P0C7V9 234 aa1.44□□□□□ -2.18
PTPRK-215ENST00000498284 BCL2P10415 239 aa1.44□□□□□ -2.18
PTPRK-215ENST00000498284 SSR2P43308 183 aa1.44□□□□□ -2.18
PTPRK-215ENST00000498284 TMBIM6P55061 237 aa1.44□□□□□ -2.18
PTPRK-215ENST00000498284 Q1T7F1 81 aa1.44□□□□□ -2.18
PTPRK-215ENST00000498284 DEFB112Q30KQ8 113 aa1.44□□□□□ -2.18
PTPRK-215ENST00000498284 SCGB2B2Q4G0G5 96 aa1.44□□□□□ -2.18
PTPRK-215ENST00000498284 CCDC58Q4VC31 144 aa1.44□□□□□ -2.18
PTPRK-215ENST00000498284 PATE2Q6UY27 113 aa1.44□□□□□ -2.18
PTPRK-215ENST00000498284 PDZD9Q8IXQ8 264 aa1.44□□□□□ -2.18
PTPRK-215ENST00000498284 TMEM229BQ8NBD8 167 aa1.44□□□□□ -2.18
PTPRK-215ENST00000498284 OR2T10Q8NGZ9 312 aa1.44□□□□□ -2.18
PTPRK-215ENST00000498284 ISOC1Q96CN7 298 aa1.44□□□□□ -2.18
PTPRK-215ENST00000498284 SCGB3A1Q96QR1 104 aa1.44□□□□□ -2.18
PTPRK-215ENST00000498284 CGREF1Q99674 301 aa1.44□□□□□ -2.18
PTPRK-215ENST00000498284 HIST1H2BLQ99880 126 aa1.44□□□□□ -2.18
PTPRK-215ENST00000498284 GINS4Q9BRT9 223 aa1.44□□□□□ -2.18
PTPRK-215ENST00000498284 OR2H1Q9GZK4 316 aa1.44□□□□□ -2.18
PTPRK-215ENST00000498284 CKLFQ9UBR5 152 aa1.44□□□□□ -2.18
PTPRK-215ENST00000498284 HSPB8Q9UJY1 196 aa1.44□□□□□ -2.18
PTPRK-215ENST00000498284 SRRM2Q9UQ35 2752 aaKnown RBP1.44□□□□□ -2.18
PTPRK-215ENST00000498284 TMEM189A5PLL7 270 aa1.43□□□□□ -2.18
PTPRK-215ENST00000498284 IBA57-AS1B1ANH7 110 aa1.43□□□□□ -2.18
PTPRK-215ENST00000498284 C9JAW5 83 aa1.43□□□□□ -2.18
PTPRK-215ENST00000498284 APOC4-APOC2K7ER74 178 aa1.43□□□□□ -2.18
PTPRK-215ENST00000498284 APOC2P02655 101 aa1.43□□□□□ -2.18
PTPRK-215ENST00000498284 SRP9P49458 86 aaKnown RBP1.43□□□□□ -2.18
PTPRK-215ENST00000498284 HIST1H1AQ02539 215 aaPredicted RBP1.43□□□□□ -2.18
PTPRK-215ENST00000498284 VMA21Q3ZAQ7 101 aa1.43□□□□□ -2.18
PTPRK-215ENST00000498284 AAED1Q7RTV5 226 aa1.43□□□□□ -2.18
PTPRK-215ENST00000498284 NDUFA11Q86Y39 141 aa1.43□□□□□ -2.18
PTPRK-215ENST00000498284 WFDC9Q8NEX5 89 aa1.43□□□□□ -2.18
PTPRK-215ENST00000498284 OR5A1Q8NGJ0 315 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms