RNA–Protein interactions for RNA: ENST00000498034.5

LMBR1-219, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-219ENST00000498034 C15orf54Q8N8G6 183 aa13.32□□□□□ -0.28
LMBR1-219ENST00000498034 TRAV1-1A0A0B4J248 108 aa13.31□□□□□ -0.28
LMBR1-219ENST00000498034 IGLV2-8P01709 118 aa13.31□□□□□ -0.28
LMBR1-219ENST00000498034 CENPWQ5EE01 88 aa13.31□□□□□ -0.28
LMBR1-219ENST00000498034 CHCHD5Q9BSY4 110 aa13.31□□□□□ -0.28
LMBR1-219ENST00000498034 SMIM17P0DL12 118 aa13.3□□□□□ -0.28
LMBR1-219ENST00000498034 NTM-AS1Q6ZSK4 140 aa13.3□□□□□ -0.28
LMBR1-219ENST00000498034 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.3□□□□□ -0.28
LMBR1-219ENST00000498034 C1orf43Q9BWL3 253 aa13.3□□□□□ -0.28
LMBR1-219ENST00000498034 HERC1Q15751 4861 aa13.3□□□□□ -0.28
LMBR1-219ENST00000498034 FLG2Q5D862 2391 aaPredicted RBP13.29□□□□□ -0.28
LMBR1-219ENST00000498034 RAB19A4D1S5 217 aa13.29□□□□□ -0.28
LMBR1-219ENST00000498034 CRPP02741 224 aa13.29□□□□□ -0.28
LMBR1-219ENST00000498034 ANGP03950 147 aaKnown RBP13.29□□□□□ -0.28
LMBR1-219ENST00000498034 RAB5CP51148 216 aa13.29□□□□□ -0.28
LMBR1-219ENST00000498034 LINC00528Q8N1L1 170 aa13.29□□□□□ -0.28
LMBR1-219ENST00000498034 AP1S3Q96PC3 154 aa13.29□□□□□ -0.28
LMBR1-219ENST00000498034 TPPP3Q9BW30 176 aa13.29□□□□□ -0.28
LMBR1-219ENST00000498034 VAX2Q9UIW0 290 aa13.29□□□□□ -0.28
LMBR1-219ENST00000498034 SRRM2Q9UQ35 2752 aaKnown RBP13.28□□□□□ -0.28
LMBR1-219ENST00000498034 IGLC6P0CF74 106 aa13.28□□□□□ -0.28
LMBR1-219ENST00000498034 OR2D3Q8NGH3 330 aa13.28□□□□□ -0.28
LMBR1-219ENST00000498034 DAZAP1Q96EP5 407 aaKnown RBP13.28□□□□□ -0.28
LMBR1-219ENST00000498034 C19orf71A6NCJ1 209 aa13.27□□□□□ -0.29
LMBR1-219ENST00000498034 SULT1A2P50226 295 aa13.27□□□□□ -0.29
LMBR1-219ENST00000498034 SCXQ7RTU7 201 aa13.27□□□□□ -0.29
LMBR1-219ENST00000498034 FER1L6-AS1Q8NA97 138 aa13.27□□□□□ -0.29
LMBR1-219ENST00000498034 TEX46H3BTG2 121 aa13.26□□□□□ -0.29
LMBR1-219ENST00000498034 PLA2G1BP04054 148 aaKnown RBP13.26□□□□□ -0.29
LMBR1-219ENST00000498034 MGPP08493 103 aa13.26□□□□□ -0.29
LMBR1-219ENST00000498034 TMEM97Q5BJF2 176 aa13.26□□□□□ -0.29
LMBR1-219ENST00000498034 EIF5AL1Q6IS14 154 aaKnown RBP13.26□□□□□ -0.29
LMBR1-219ENST00000498034 GNG4P50150 75 aa13.25□□□□□ -0.29
LMBR1-219ENST00000498034 RPS20P60866 119 aaKnown RBP13.25□□□□□ -0.29
LMBR1-219ENST00000498034 PKIAP61925 76 aa13.25□□□□□ -0.29
LMBR1-219ENST00000498034 MEF2BQ02080 365 aaPredicted RBP13.25□□□□□ -0.29
LMBR1-219ENST00000498034 GAGE6Q13070 117 aa13.25□□□□□ -0.29
LMBR1-219ENST00000498034 MYCBP2O75592 4640 aa13.25□□□□□ -0.29
LMBR1-219ENST00000498034 M0QY20 66 aa13.24□□□□□ -0.29
LMBR1-219ENST00000498034 MED9Q9NWA0 146 aa13.24□□□□□ -0.29
LMBR1-219ENST00000498034 DMBT1Q9UGM3 2413 aaPredicted RBP13.23□□□□□ -0.29
LMBR1-219ENST00000498034 TRBV20OR9-2A0A075B6H5 130 aa13.23□□□□□ -0.29
LMBR1-219ENST00000498034 TRBV25-1A0A075B6N4 114 aa13.23□□□□□ -0.29
LMBR1-219ENST00000498034 PDE6DO43924 150 aa13.23□□□□□ -0.29
LMBR1-219ENST00000498034 HLA-DQA1P01909 254 aa13.23□□□□□ -0.29
LMBR1-219ENST00000498034 RBX1P62877 108 aa13.23□□□□□ -0.29
LMBR1-219ENST00000498034 CACNG7P62955 275 aa13.23□□□□□ -0.29
LMBR1-219ENST00000498034 C14orf177Q52M58 125 aa13.23□□□□□ -0.29
LMBR1-219ENST00000498034 SUMO4Q6EEV6 95 aa13.23□□□□□ -0.29
LMBR1-219ENST00000498034 CLPSL2Q6UWE3 100 aa13.23□□□□□ -0.29
LMBR1-219ENST00000498034 SMIM12Q96EX1 92 aa13.23□□□□□ -0.29
LMBR1-219ENST00000498034 CHAC1Q9BUX1 264 aa13.23□□□□□ -0.29
LMBR1-219ENST00000498034 USP17L23D6RBM5 183 aa13.22□□□□□ -0.29
LMBR1-219ENST00000498034 P01737 135 aa13.22□□□□□ -0.29
LMBR1-219ENST00000498034 MIAQ16674 131 aa13.22□□□□□ -0.29
LMBR1-219ENST00000498034 H7C1H1 209 aa13.21□□□□□ -0.29
LMBR1-219ENST00000498034 IFNA1P01562 189 aa13.21□□□□□ -0.29
LMBR1-219ENST00000498034 BCL2P10415 239 aa13.21□□□□□ -0.29
LMBR1-219ENST00000498034 IQCJQ1A5X6 159 aa13.21□□□□□ -0.29
LMBR1-219ENST00000498034 LYZL1Q6UWQ5 148 aa13.21□□□□□ -0.29
LMBR1-219ENST00000498034 LINC00269Q8N2A0 174 aa13.21□□□□□ -0.29
LMBR1-219ENST00000498034 CIRBP-AS1Q8TBR5 109 aa13.21□□□□□ -0.29
LMBR1-219ENST00000498034 PRR34Q9NV39 138 aa13.21□□□□□ -0.29
LMBR1-219ENST00000498034 IGHV1-24A0A0C4DH33 117 aa13.2□□□□□ -0.3
LMBR1-219ENST00000498034 XKRY2A2RUG3 117 aa13.2□□□□□ -0.3
LMBR1-219ENST00000498034 NKX2-5P52952 324 aaPredicted RBP13.2□□□□□ -0.3
LMBR1-219ENST00000498034 TCTE3Q8IZS6 198 aa13.2□□□□□ -0.3
LMBR1-219ENST00000498034 F2Z2F3 143 aa13.19□□□□□ -0.3
LMBR1-219ENST00000498034 NTF3P20783 257 aa13.19□□□□□ -0.3
LMBR1-219ENST00000498034 KRTAP26-1Q6PEX3 210 aa13.19□□□□□ -0.3
LMBR1-219ENST00000498034 SLC51BQ86UW2 128 aa13.19□□□□□ -0.3
LMBR1-219ENST00000498034 J3QL48 77 aa13.18□□□□□ -0.3
LMBR1-219ENST00000498034 PRSS1P07477 247 aa13.18□□□□□ -0.3
LMBR1-219ENST00000498034 RASL11AQ6T310 242 aa13.18□□□□□ -0.3
LMBR1-219ENST00000498034 NUDT10Q8NFP7 164 aa13.18□□□□□ -0.3
LMBR1-219ENST00000498034 DEFB104AQ8WTQ1 72 aa13.18□□□□□ -0.3
LMBR1-219ENST00000498034 NUDT11Q96G61 164 aa13.18□□□□□ -0.3
LMBR1-219ENST00000498034 BIN3Q9NQY0 253 aa13.18□□□□□ -0.3
LMBR1-219ENST00000498034 TRGC1P0CF51 173 aa13.17□□□□□ -0.3
LMBR1-219ENST00000498034 DPH3P1Q9H4G8 78 aa13.17□□□□□ -0.3
LMBR1-219ENST00000498034 C9orf62Q8N4C0 152 aa13.16□□□□□ -0.3
LMBR1-219ENST00000498034 C20orf203Q8NBC4 194 aa13.16□□□□□ -0.3
LMBR1-219ENST00000498034 IGLV10-54A0A075B6I4 117 aa13.15□□□□□ -0.3
LMBR1-219ENST00000498034 KRTAP10-4P60372 401 aaPredicted RBP13.15□□□□□ -0.3
LMBR1-219ENST00000498034 REG3AQ06141 175 aa13.15□□□□□ -0.3
LMBR1-219ENST00000498034 TMEM243Q9BU79 118 aa13.15□□□□□ -0.3
LMBR1-219ENST00000498034 NIT2Q9NQR4 276 aa13.15□□□□□ -0.3
LMBR1-219ENST00000498034 IGLV4-60A0A075B6I1 120 aa13.14□□□□□ -0.31
LMBR1-219ENST00000498034 RNASE7Q9H1E1 156 aaKnown RBP13.14□□□□□ -0.31
LMBR1-219ENST00000498034 K7EN84 100 aa13.13□□□□□ -0.31
LMBR1-219ENST00000498034 CTRLP40313 264 aa13.13□□□□□ -0.31
LMBR1-219ENST00000498034 DGAT2L7PQ6IED9 249 aa13.13□□□□□ -0.31
LMBR1-219ENST00000498034 WDR73Q6P4I2 378 aa13.13□□□□□ -0.31
LMBR1-219ENST00000498034 OCC1Q8TAD7 63 aa13.13□□□□□ -0.31
LMBR1-219ENST00000498034 GFRA4Q9GZZ7 299 aa13.13□□□□□ -0.31
LMBR1-219ENST00000498034 KRTAP29-1A8MX34 341 aaPredicted RBP13.12□□□□□ -0.31
LMBR1-219ENST00000498034 TAGLN2P37802 199 aaKnown RBP13.12□□□□□ -0.31
LMBR1-219ENST00000498034 TWIST1Q15672 202 aa13.12□□□□□ -0.31
LMBR1-219ENST00000498034 C9orf163Q8N9P6 203 aa13.12□□□□□ -0.31
LMBR1-219ENST00000498034 PGLYRP4Q96LB8 373 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms