RNA–Protein interactions for RNA: ENST00000497179.1

USP11-212, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 5

Gene USP11, Length 900 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-212ENST00000497179 TMEM242Q9NWH2 141 aa9.97□□□□□ -0.81
USP11-212ENST00000497179 MRPS16Q9Y3D3 137 aaKnown RBP9.97□□□□□ -0.81
USP11-212ENST00000497179 RYR3Q15413 4870 aa9.96□□□□□ -0.81
USP11-212ENST00000497179 S100A8P05109 93 aa9.96□□□□□ -0.82
USP11-212ENST00000497179 HBBP68871 147 aa9.96□□□□□ -0.82
USP11-212ENST00000497179 MRPL54Q6P161 138 aaKnown RBP9.96□□□□□ -0.82
USP11-212ENST00000497179 GATD1Q8NB37 220 aa9.96□□□□□ -0.82
USP11-212ENST00000497179 ZNRF2Q8NHG8 242 aa9.96□□□□□ -0.82
USP11-212ENST00000497179 TRBV7-3A0A075B6L6 115 aa9.95□□□□□ -0.82
USP11-212ENST00000497179 SNAPINO95295 136 aa9.95□□□□□ -0.82
USP11-212ENST00000497179 CAMPP49913 170 aa9.95□□□□□ -0.82
USP11-212ENST00000497179 UBE2D3P61077 147 aa9.95□□□□□ -0.82
USP11-212ENST00000497179 UBE2D2P62837 147 aa9.95□□□□□ -0.82
USP11-212ENST00000497179 RASL11AQ6T310 242 aa9.95□□□□□ -0.82
USP11-212ENST00000497179 ATP6V0E2Q8NHE4 81 aa9.95□□□□□ -0.82
USP11-212ENST00000497179 FRZBQ92765 325 aa9.95□□□□□ -0.82
USP11-212ENST00000497179 DNAJC30Q96LL9 226 aa9.95□□□□□ -0.82
USP11-212ENST00000497179 UPK3BQ9BT76 320 aa9.95□□□□□ -0.82
USP11-212ENST00000497179 KCNIP4Q6PIL6 250 aa9.94□□□□□ -0.82
USP11-212ENST00000497179 RNF185Q96GF1 192 aa9.94□□□□□ -0.82
USP11-212ENST00000497179 BTF3L4Q96K17 158 aa9.94□□□□□ -0.82
USP11-212ENST00000497179 GTSF1LQ9H1H1 148 aa9.94□□□□□ -0.82
USP11-212ENST00000497179 RPS10P5Q9NQ39 176 aa9.94□□□□□ -0.82
USP11-212ENST00000497179 TRAV9-1A0A075B6T8 112 aa9.93□□□□□ -0.82
USP11-212ENST00000497179 TRAV26-2A0A0B4J265 109 aa9.93□□□□□ -0.82
USP11-212ENST00000497179 RAB4AP20338 218 aa9.93□□□□□ -0.82
USP11-212ENST00000497179 FAM104BQ5XKR9 115 aa9.93□□□□□ -0.82
USP11-212ENST00000497179 AMN1Q8IY45 258 aa9.93□□□□□ -0.82
USP11-212ENST00000497179 NIT2Q9NQR4 276 aa9.93□□□□□ -0.82
USP11-212ENST00000497179 S100PP25815 95 aa9.92□□□□□ -0.82
USP11-212ENST00000497179 MRAP2Q96G30 205 aa9.92□□□□□ -0.82
USP11-212ENST00000497179 TNFRSF18Q9Y5U5 241 aa9.92□□□□□ -0.82
USP11-212ENST00000497179 HYDINQ4G0P3 5121 aa9.92□□□□□ -0.82
USP11-212ENST00000497179 KMT2AQ03164 3969 aa9.91□□□□□ -0.82
USP11-212ENST00000497179 MRPL51Q4U2R6 128 aaKnown RBP9.9□□□□□ -0.82
USP11-212ENST00000497179 LELP1Q5T871 98 aa9.9□□□□□ -0.82
USP11-212ENST00000497179 DAZ4Q86SG3 579 aaKnown RBP9.9□□□□□ -0.82
USP11-212ENST00000497179 RPL39LQ96EH5 51 aaKnown RBP9.9□□□□□ -0.82
USP11-212ENST00000497179 DAZ3Q9NR90 486 aaKnown RBP9.9□□□□□ -0.82
USP11-212ENST00000497179 TRBV6-5A0A0K0K1A5 114 aa9.89□□□□□ -0.83
USP11-212ENST00000497179 GAS8-AS1O95177 125 aa9.89□□□□□ -0.83
USP11-212ENST00000497179 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.89□□□□□ -0.83
USP11-212ENST00000497179 Q9H8V8 135 aa9.89□□□□□ -0.83
USP11-212ENST00000497179 URGCP-MRPS24S4R325 110 aa9.89□□□□□ -0.83
USP11-212ENST00000497179 IGHV3-38A0A0C4DH36 116 aa9.88□□□□□ -0.83
USP11-212ENST00000497179 SMKR1H3BMG3 65 aa9.88□□□□□ -0.83
USP11-212ENST00000497179 SIVA1O15304 175 aa9.88□□□□□ -0.83
USP11-212ENST00000497179 NCR2O95944 276 aa9.88□□□□□ -0.83
USP11-212ENST00000497179 OR10J3Q5JRS4 329 aa9.88□□□□□ -0.83
USP11-212ENST00000497179 ATRAIDQ6UW56 229 aa9.88□□□□□ -0.83
USP11-212ENST00000497179 WFDC10BQ8IUB3 73 aa9.88□□□□□ -0.83
USP11-212ENST00000497179 DNAH2Q9P225 4427 aa9.88□□□□□ -0.83
USP11-212ENST00000497179 IGLV2-18A0A075B6J9 118 aa9.87□□□□□ -0.83
USP11-212ENST00000497179 TRAV8-6A0A0B4J262 113 aa9.87□□□□□ -0.83
USP11-212ENST00000497179 PPP1R17O96001 155 aa9.87□□□□□ -0.83
USP11-212ENST00000497179 RPS10P46783 165 aaKnown RBP9.87□□□□□ -0.83
USP11-212ENST00000497179 TMEM97Q5BJF2 176 aa9.87□□□□□ -0.83
USP11-212ENST00000497179 NRACQ8N912 160 aa9.87□□□□□ -0.83
USP11-212ENST00000497179 NBDYA0A0U1RRE5 68 aa9.86□□□□□ -0.83
USP11-212ENST00000497179 TMEM136Q6ZRR5 245 aa9.86□□□□□ -0.83
USP11-212ENST00000497179 TRBV6-8A0A0A6YYG3 113 aa9.85□□□□□ -0.83
USP11-212ENST00000497179 SDHAF1A6NFY7 115 aa9.85□□□□□ -0.83
USP11-212ENST00000497179 D6R8Y8 96 aa9.85□□□□□ -0.83
USP11-212ENST00000497179 PPBPP02775 128 aa9.85□□□□□ -0.83
USP11-212ENST00000497179 DNAH10OSP0CZ25 163 aa9.85□□□□□ -0.83
USP11-212ENST00000497179 CKS2P33552 79 aa9.85□□□□□ -0.83
USP11-212ENST00000497179 Q6ZR54 194 aa9.85□□□□□ -0.83
USP11-212ENST00000497179 NTM-AS1Q6ZSK4 140 aa9.85□□□□□ -0.83
USP11-212ENST00000497179 ST20Q9HBF5 79 aa9.85□□□□□ -0.83
USP11-212ENST00000497179 DNAH10Q8IVF4 4471 aa9.84□□□□□ -0.83
USP11-212ENST00000497179 TRBV24-1A0A075B6N3 115 aa9.84□□□□□ -0.83
USP11-212ENST00000497179 ELOBQ15370 118 aa9.84□□□□□ -0.83
USP11-212ENST00000497179 COX19Q49B96 90 aa9.84□□□□□ -0.83
USP11-212ENST00000497179 TTC32Q5I0X7 151 aa9.84□□□□□ -0.83
USP11-212ENST00000497179 LINC01556Q5JQF7 62 aa9.84□□□□□ -0.83
USP11-212ENST00000497179 TMEM70Q9BUB7 260 aa9.84□□□□□ -0.83
USP11-212ENST00000497179 M0R2N4 97 aa9.83□□□□□ -0.84
USP11-212ENST00000497179 PHOX2AO14813 284 aa9.83□□□□□ -0.84
USP11-212ENST00000497179 HLA-DQA1P01909 254 aa9.83□□□□□ -0.84
USP11-212ENST00000497179 POLR2KP53803 58 aaKnown RBP9.83□□□□□ -0.84
USP11-212ENST00000497179 COTL1Q14019 142 aa9.83□□□□□ -0.84
USP11-212ENST00000497179 IQCJQ1A5X6 159 aa9.83□□□□□ -0.84
USP11-212ENST00000497179 ORMDL3Q8N138 153 aa9.83□□□□□ -0.84
USP11-212ENST00000497179 YPEL4Q96NS1 127 aa9.83□□□□□ -0.84
USP11-212ENST00000497179 GNB1LQ9BYB4 327 aa9.83□□□□□ -0.84
USP11-212ENST00000497179 KRTAP1-5Q9BYS1 174 aa9.83□□□□□ -0.84
USP11-212ENST00000497179 TRBV25-1A0A075B6N4 114 aa9.82□□□□□ -0.84
USP11-212ENST00000497179 TGIF2-C20orf24A0A0A6YYL0 155 aa9.82□□□□□ -0.84
USP11-212ENST00000497179 IGHV1-24A0A0C4DH33 117 aa9.82□□□□□ -0.84
USP11-212ENST00000497179 TRBV27A0A0K0K1C4 114 aa9.82□□□□□ -0.84
USP11-212ENST00000497179 I3L3M4 83 aa9.82□□□□□ -0.84
USP11-212ENST00000497179 K7EP13 123 aa9.82□□□□□ -0.84
USP11-212ENST00000497179 TNFRSF6BO95407 300 aa9.82□□□□□ -0.84
USP11-212ENST00000497179 SUMO2P61956 95 aaKnown RBP9.82□□□□□ -0.84
USP11-212ENST00000497179 RPL32P62910 135 aaKnown RBP9.82□□□□□ -0.84
USP11-212ENST00000497179 PRELID3AQ96N28 172 aa9.82□□□□□ -0.84
USP11-212ENST00000497179 C20orf78Q9BR46 151 aa9.82□□□□□ -0.84
USP11-212ENST00000497179 NPYP01303 97 aa9.81□□□□□ -0.84
USP11-212ENST00000497179 MT-ND6P03923 174 aa9.81□□□□□ -0.84
USP11-212ENST00000497179 NIT1Q86X76 327 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms