RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, human

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CRNKL1-205	ENST00000496549		Q6ZS52	159 aa		6.22	□□□□□ -1.41
CRNKL1-205	ENST00000496549	NAV3	Q8IVL0	2385 aa		6.22	□□□□□ -1.41
CRNKL1-205	ENST00000496549	GAFA1	Q96PS6	74 aa		6.22	□□□□□ -1.41
CRNKL1-205	ENST00000496549	CHD8	Q9HCK8	2581 aa		6.22	□□□□□ -1.41
CRNKL1-205	ENST00000496549	MOB4	Q9Y3A3	225 aa		6.22	□□□□□ -1.41
CRNKL1-205	ENST00000496549	C2orf16	Q68DN1	1984 aa		6.22	□□□□□ -1.41
CRNKL1-205	ENST00000496549	TSPEAR-AS2	P59090	65 aa		6.22	□□□□□ -1.41
CRNKL1-205	ENST00000496549		F6UB75	175 aa		6.22	□□□□□ -1.41
CRNKL1-205	ENST00000496549		I3L2K1	104 aa		6.22	□□□□□ -1.41
CRNKL1-205	ENST00000496549	XCL1	P47992	114 aa		6.22	□□□□□ -1.41
CRNKL1-205	ENST00000496549	XCL2	Q9UBD3	114 aa		6.22	□□□□□ -1.41
CRNKL1-205	ENST00000496549	IGHV3-49	A0A0A0MS15	119 aa		6.21	□□□□□ -1.41
CRNKL1-205	ENST00000496549	FAM222A	Q5U5X8	452 aa		6.21	□□□□□ -1.41
CRNKL1-205	ENST00000496549	FAM223A	Q8IWN6	122 aa		6.21	□□□□□ -1.41
CRNKL1-205	ENST00000496549	DCHS1	Q96JQ0	3298 aa		6.21	□□□□□ -1.41
CRNKL1-205	ENST00000496549	MAP1B	P46821	2468 aa	Known RBP	6.21	□□□□□ -1.42
CRNKL1-205	ENST00000496549		A0A087WWL8	130 aa		6.21	□□□□□ -1.42
CRNKL1-205	ENST00000496549		A0A1W2PRX2	142 aa		6.21	□□□□□ -1.42
CRNKL1-205	ENST00000496549	NXPH4	O95158	308 aa		6.21	□□□□□ -1.42
CRNKL1-205	ENST00000496549	RNF5	Q99942	180 aa		6.21	□□□□□ -1.42
CRNKL1-205	ENST00000496549	IGHV1-58	A0A0C4DH39	117 aa		6.21	□□□□□ -1.42
CRNKL1-205	ENST00000496549	IGLV4-69	A0A075B6H9	119 aa		6.2	□□□□□ -1.42
CRNKL1-205	ENST00000496549	PINLYP	A6NC86	204 aa		6.2	□□□□□ -1.42
CRNKL1-205	ENST00000496549		H0YGX0	51 aa		6.2	□□□□□ -1.42
CRNKL1-205	ENST00000496549	NBR2	O15453	112 aa		6.2	□□□□□ -1.42
CRNKL1-205	ENST00000496549	HOXD3	P31249	432 aa	Predicted RBP	6.2	□□□□□ -1.42
CRNKL1-205	ENST00000496549	HAMP	P81172	84 aa		6.2	□□□□□ -1.42
CRNKL1-205	ENST00000496549		Q5XG85	94 aa		6.2	□□□□□ -1.42
CRNKL1-205	ENST00000496549	C9orf139	Q6ZV77	190 aa		6.2	□□□□□ -1.42
CRNKL1-205	ENST00000496549	CTSZ	Q9UBR2	303 aa		6.2	□□□□□ -1.42
CRNKL1-205	ENST00000496549	CEP295	Q9C0D2	2601 aa		6.2	□□□□□ -1.42
CRNKL1-205	ENST00000496549	IGKV3-7	A0A075B6H7	116 aa		6.2	□□□□□ -1.42
CRNKL1-205	ENST00000496549	COX8C	Q7Z4L0	72 aa		6.2	□□□□□ -1.42
CRNKL1-205	ENST00000496549	LINC01600	Q96MT4	127 aa		6.2	□□□□□ -1.42
CRNKL1-205	ENST00000496549	HES7	Q9BYE0	225 aa		6.2	□□□□□ -1.42
CRNKL1-205	ENST00000496549		Q9HAA7	133 aa		6.2	□□□□□ -1.42
CRNKL1-205	ENST00000496549	BUB3	O43684	328 aa		6.2	□□□□□ -1.42
CRNKL1-205	ENST00000496549	ECSCR	Q19T08	205 aa		6.2	□□□□□ -1.42
CRNKL1-205	ENST00000496549	UPK3B	Q9BT76	320 aa		6.2	□□□□□ -1.42
CRNKL1-205	ENST00000496549	LENEP	Q9Y5L5	61 aa		6.2	□□□□□ -1.42
CRNKL1-205	ENST00000496549	CGB3	P0DN86	165 aa		6.19	□□□□□ -1.42
CRNKL1-205	ENST00000496549	CGB7	P0DN87	165 aa		6.19	□□□□□ -1.42
CRNKL1-205	ENST00000496549	C2orf48	Q96LS8	159 aa		6.19	□□□□□ -1.42
CRNKL1-205	ENST00000496549	ORMDL1	Q9P0S3	153 aa		6.19	□□□□□ -1.42
CRNKL1-205	ENST00000496549	IGHV1-3	A0A0C4DH29	117 aa		6.19	□□□□□ -1.42
CRNKL1-205	ENST00000496549	CCL4	P13236	92 aa		6.19	□□□□□ -1.42
CRNKL1-205	ENST00000496549	BLCAP	P62952	87 aa		6.19	□□□□□ -1.42
CRNKL1-205	ENST00000496549	TMEM105	Q8N8V8	129 aa		6.19	□□□□□ -1.42
CRNKL1-205	ENST00000496549		K7EIM0	57 aa		6.19	□□□□□ -1.42
CRNKL1-205	ENST00000496549	TRAV7	A0A075B6U4	112 aa		6.18	□□□□□ -1.42
CRNKL1-205	ENST00000496549		F8WEM9	126 aa		6.18	□□□□□ -1.42
CRNKL1-205	ENST00000496549	JMJD7-PLA2G4B	H0Y9G9	81 aa		6.18	□□□□□ -1.42
CRNKL1-205	ENST00000496549	IGKV3-15	P01624	115 aa		6.18	□□□□□ -1.42
CRNKL1-205	ENST00000496549	IGLV2-23	P01705	113 aa		6.18	□□□□□ -1.42
CRNKL1-205	ENST00000496549	IGLV3-19	P01714	112 aa		6.18	□□□□□ -1.42
CRNKL1-205	ENST00000496549	SNRPD3	P62318	126 aa	Known RBP	6.18	□□□□□ -1.42
CRNKL1-205	ENST00000496549	SMCR5	Q8TEV8	140 aa		6.18	□□□□□ -1.42
CRNKL1-205	ENST00000496549	DCANP1	Q8TF63	244 aa		6.18	□□□□□ -1.42
CRNKL1-205	ENST00000496549	MRPL53	Q96EL3	112 aa	Known RBP	6.18	□□□□□ -1.42
CRNKL1-205	ENST00000496549	COL4A2	P08572	1712 aa		6.18	□□□□□ -1.42
CRNKL1-205	ENST00000496549	FAM223B	A6NKX1	122 aa		6.18	□□□□□ -1.42
CRNKL1-205	ENST00000496549	PCSK5	Q92824	1860 aa		6.18	□□□□□ -1.42
CRNKL1-205	ENST00000496549	CAD	P27708	2225 aa		6.18	□□□□□ -1.42
CRNKL1-205	ENST00000496549	IGHV4-4	A0A075B6R2	117 aa		6.18	□□□□□ -1.42
CRNKL1-205	ENST00000496549	ENHO	Q6UWT2	76 aa		6.18	□□□□□ -1.42
CRNKL1-205	ENST00000496549	ACACB	O00763	2458 aa		6.17	□□□□□ -1.42
CRNKL1-205	ENST00000496549	PF4	P02776	101 aa		6.17	□□□□□ -1.42
CRNKL1-205	ENST00000496549	IGHV1-8	P0DP01	117 aa		6.17	□□□□□ -1.42
CRNKL1-205	ENST00000496549		Q9H8V8	135 aa		6.17	□□□□□ -1.42
CRNKL1-205	ENST00000496549	IGHV1-18	A0A0C4DH31	117 aa		6.17	□□□□□ -1.42
CRNKL1-205	ENST00000496549	IGIP	A6NJ69	53 aa		6.17	□□□□□ -1.42
CRNKL1-205	ENST00000496549	PRAC2	D3DTV9	90 aa		6.17	□□□□□ -1.42
CRNKL1-205	ENST00000496549	MED14OS	P0DP75	135 aa		6.17	□□□□□ -1.42
CRNKL1-205	ENST00000496549	HIST2H2BC	Q6DN03	193 aa		6.17	□□□□□ -1.42
CRNKL1-205	ENST00000496549	HIST2H2BD	Q6DRA6	164 aa		6.17	□□□□□ -1.42
CRNKL1-205	ENST00000496549	SUMO4	Q6EEV6	95 aa		6.17	□□□□□ -1.42
CRNKL1-205	ENST00000496549	ZNF292	O60281	2723 aa		6.17	□□□□□ -1.42
CRNKL1-205	ENST00000496549	CEP192	Q8TEP8	1941 aa		6.17	□□□□□ -1.42
CRNKL1-205	ENST00000496549	BUB1B-PAK6	H3BSN5	160 aa		6.17	□□□□□ -1.42
CRNKL1-205	ENST00000496549	FHL2	Q14192	279 aa		6.17	□□□□□ -1.42
CRNKL1-205	ENST00000496549	SNURF	Q9Y675	71 aa		6.17	□□□□□ -1.42
CRNKL1-205	ENST00000496549	RP1L1	Q8IWN7	2480 aa	Predicted RBP	6.17	□□□□□ -1.42
CRNKL1-205	ENST00000496549	TRBV7-6	A0A0J9YX20	115 aa		6.16	□□□□□ -1.42
CRNKL1-205	ENST00000496549	FREM2	Q5SZK8	3169 aa		6.16	□□□□□ -1.42
CRNKL1-205	ENST00000496549	EPG5	Q9HCE0	2579 aa		6.16	□□□□□ -1.42
CRNKL1-205	ENST00000496549	TEX22	C9J3V5	150 aa		6.16	□□□□□ -1.42
CRNKL1-205	ENST00000496549	TRBV12-3	P01733	135 aa		6.16	□□□□□ -1.42
CRNKL1-205	ENST00000496549	IGHV7-4-1	A0A0J9YVY3	117 aa		6.16	□□□□□ -1.42
CRNKL1-205	ENST00000496549	PAX4	O43316	350 aa		6.16	□□□□□ -1.42
CRNKL1-205	ENST00000496549	LINC00158	P58513	81 aa		6.16	□□□□□ -1.42
CRNKL1-205	ENST00000496549	LINC01561	Q8N1V8	128 aa		6.16	□□□□□ -1.42
CRNKL1-205	ENST00000496549	OPRPN	Q99935	248 aa	Predicted RBP	6.16	□□□□□ -1.42
CRNKL1-205	ENST00000496549	CLEC19A	Q6UXS0	136 aa		6.15	□□□□□ -1.42
CRNKL1-205	ENST00000496549	IGHV1-46	P01743	117 aa		6.15	□□□□□ -1.42
CRNKL1-205	ENST00000496549	C20orf203	Q8NBC4	194 aa		6.15	□□□□□ -1.42
CRNKL1-205	ENST00000496549	TOMM7	Q9P0U1	55 aa		6.15	□□□□□ -1.42
CRNKL1-205	ENST00000496549	DPM3	Q9P2X0	92 aa		6.15	□□□□□ -1.42
CRNKL1-205	ENST00000496549	DOPEY2	Q9Y3R5	2298 aa		6.15	□□□□□ -1.42
CRNKL1-205	ENST00000496549	RPL36A	P83881	106 aa	Known RBP	6.15	□□□□□ -1.43
CRNKL1-205	ENST00000496549	RPL36AL	Q969Q0	106 aa	Known RBP	6.15	□□□□□ -1.43

Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms