RNA–Protein interactions for RNA: ENST00000496360.5

MACF1-223, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 2,080 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-223ENST00000496360 LINC00477Q96M19 166 aa11.31□□□□□ -0.6
MACF1-223ENST00000496360 LINC01587Q99440 93 aa11.31□□□□□ -0.6
MACF1-223ENST00000496360 AKAP9Q99996 3911 aa11.31□□□□□ -0.6
MACF1-223ENST00000496360 F8P00451 2351 aa11.31□□□□□ -0.6
MACF1-223ENST00000496360 VCYO14598 125 aa11.31□□□□□ -0.6
MACF1-223ENST00000496360 IGHV1-69P01742 117 aa11.31□□□□□ -0.6
MACF1-223ENST00000496360 PHLDA3Q9Y5J5 127 aa11.31□□□□□ -0.6
MACF1-223ENST00000496360 CADP27708 2225 aa11.3□□□□□ -0.6
MACF1-223ENST00000496360 NXPH4O95158 308 aa11.3□□□□□ -0.6
MACF1-223ENST00000496360 S100A4P26447 101 aaKnown RBP11.3□□□□□ -0.6
MACF1-223ENST00000496360 DYNLRB1Q9NP97 96 aa11.3□□□□□ -0.6
MACF1-223ENST00000496360 A0A1W2PPR1 153 aa11.29□□□□□ -0.6
MACF1-223ENST00000496360 POLR2KP53803 58 aaKnown RBP11.29□□□□□ -0.6
MACF1-223ENST00000496360 C22orf34Q6ZV56 151 aa11.29□□□□□ -0.6
MACF1-223ENST00000496360 C9orf139Q6ZV77 190 aa11.29□□□□□ -0.6
MACF1-223ENST00000496360 TMEM223A0PJW6 202 aa11.29□□□□□ -0.6
MACF1-223ENST00000496360 OOSP1A8MZH6 123 aa11.29□□□□□ -0.6
MACF1-223ENST00000496360 MGPP08493 103 aa11.29□□□□□ -0.6
MACF1-223ENST00000496360 MUSTN1Q8IVN3 82 aa11.29□□□□□ -0.6
MACF1-223ENST00000496360 C14orf178Q8N769 122 aaPredicted RBP11.29□□□□□ -0.6
MACF1-223ENST00000496360 EIF4EBP3O60516 100 aaPredicted RBP11.28□□□□□ -0.6
MACF1-223ENST00000496360 EBI3Q14213 229 aa11.28□□□□□ -0.6
MACF1-223ENST00000496360 TEP1Q99973 2627 aaKnown RBP11.28□□□□□ -0.6
MACF1-223ENST00000496360 LY6G5BQ8NDX9 201 aa11.28□□□□□ -0.6
MACF1-223ENST00000496360 FAM110DQ8TAY7 271 aaPredicted RBP11.28□□□□□ -0.6
MACF1-223ENST00000496360 METTL26Q96S19 204 aa11.28□□□□□ -0.6
MACF1-223ENST00000496360 ROS1P08922 2347 aa11.27□□□□□ -0.61
MACF1-223ENST00000496360 ABCA1O95477 2261 aa11.27□□□□□ -0.61
MACF1-223ENST00000496360 BSPH1Q075Z2 132 aa11.27□□□□□ -0.61
MACF1-223ENST00000496360 ZNRF2Q8NHG8 242 aa11.27□□□□□ -0.61
MACF1-223ENST00000496360 HIVEP1P15822 2718 aa11.27□□□□□ -0.61
MACF1-223ENST00000496360 PRRC2AP48634 2157 aaKnown RBP11.27□□□□□ -0.61
MACF1-223ENST00000496360 TRBV6-5A0A0K0K1A5 114 aa11.26□□□□□ -0.61
MACF1-223ENST00000496360 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.26□□□□□ -0.61
MACF1-223ENST00000496360 OVOL1O14753 267 aa11.26□□□□□ -0.61
MACF1-223ENST00000496360 TRIAP1O43715 76 aa11.26□□□□□ -0.61
MACF1-223ENST00000496360 IGHV3-23P01764 117 aa11.26□□□□□ -0.61
MACF1-223ENST00000496360 IGHV4-39P01824 125 aa11.26□□□□□ -0.61
MACF1-223ENST00000496360 U3KQE9 123 aa11.26□□□□□ -0.61
MACF1-223ENST00000496360 H7C423 109 aa11.26□□□□□ -0.61
MACF1-223ENST00000496360 RHOHQ15669 191 aa11.26□□□□□ -0.61
MACF1-223ENST00000496360 ZNF56Q15929 161 aa11.26□□□□□ -0.61
MACF1-223ENST00000496360 C5orf47Q569G3 176 aa11.26□□□□□ -0.61
MACF1-223ENST00000496360 LRRC75A-AS1Q8N1F1 130 aa11.26□□□□□ -0.61
MACF1-223ENST00000496360 ICOSQ9Y6W8 199 aa11.26□□□□□ -0.61
MACF1-223ENST00000496360 A0A1B0GX51 115 aa11.25□□□□□ -0.61
MACF1-223ENST00000496360 CLPSL1A2RUU4 121 aa11.25□□□□□ -0.61
MACF1-223ENST00000496360 NDPQ00604 133 aa11.25□□□□□ -0.61
MACF1-223ENST00000496360 Q8N6K4 173 aa11.25□□□□□ -0.61
MACF1-223ENST00000496360 CELSR1Q9NYQ6 3014 aa11.25□□□□□ -0.61
MACF1-223ENST00000496360 ITPR3Q14573 2671 aa11.25□□□□□ -0.61
MACF1-223ENST00000496360 TRBV27A0A0K0K1C4 114 aa11.24□□□□□ -0.61
MACF1-223ENST00000496360 ODF3BA8MYP8 253 aa11.24□□□□□ -0.61
MACF1-223ENST00000496360 M0R1W7 72 aa11.24□□□□□ -0.61
MACF1-223ENST00000496360 UQCRQO14949 82 aa11.24□□□□□ -0.61
MACF1-223ENST00000496360 DEFB113Q30KQ7 82 aa11.24□□□□□ -0.61
MACF1-223ENST00000496360 APRG1Q8IVJ8 170 aa11.24□□□□□ -0.61
MACF1-223ENST00000496360 C3orf22Q8N5N4 141 aa11.24□□□□□ -0.61
MACF1-223ENST00000496360 ZFAND2AQ8N6M9 145 aa11.24□□□□□ -0.61
MACF1-223ENST00000496360 MED13LQ71F56 2210 aa11.24□□□□□ -0.61
MACF1-223ENST00000496360 UBTD1Q9HAC8 227 aa11.24□□□□□ -0.61
MACF1-223ENST00000496360 KIF25-AS1Q9Y6Z4 181 aa11.24□□□□□ -0.61
MACF1-223ENST00000496360 H7C2G1 150 aa11.23□□□□□ -0.61
MACF1-223ENST00000496360 LST1O00453 97 aa11.23□□□□□ -0.61
MACF1-223ENST00000496360 NSUN5P1Q3KNT7 163 aa11.23□□□□□ -0.61
MACF1-223ENST00000496360 PRR9Q5T870 116 aa11.23□□□□□ -0.61
MACF1-223ENST00000496360 CHCHD5Q9BSY4 110 aa11.23□□□□□ -0.61
MACF1-223ENST00000496360 NDUFA7O95182 113 aa11.23□□□□□ -0.61
MACF1-223ENST00000496360 ELANEP08246 267 aa11.23□□□□□ -0.61
MACF1-223ENST00000496360 C16orf92Q96LL3 132 aa11.23□□□□□ -0.61
MACF1-223ENST00000496360 BEX4Q9NWD9 120 aaPredicted RBP11.23□□□□□ -0.61
MACF1-223ENST00000496360 PLCE1Q9P212 2302 aa11.22□□□□□ -0.61
MACF1-223ENST00000496360 TRBV7-1A0A0A6YYK4 115 aa11.22□□□□□ -0.61
MACF1-223ENST00000496360 B9A039 149 aa11.22□□□□□ -0.61
MACF1-223ENST00000496360 EMP1P54849 157 aa11.22□□□□□ -0.61
MACF1-223ENST00000496360 LINC00315P59091 139 aa11.22□□□□□ -0.61
MACF1-223ENST00000496360 C15orf32Q32M92 178 aa11.22□□□□□ -0.61
MACF1-223ENST00000496360 LINC00526Q96FQ7 95 aa11.22□□□□□ -0.61
MACF1-223ENST00000496360 PPDPFQ9H3Y8 114 aa11.22□□□□□ -0.61
MACF1-223ENST00000496360 A0A0J9YXY3 114 aa11.21□□□□□ -0.61
MACF1-223ENST00000496360 CD3EP07766 207 aa11.21□□□□□ -0.61
MACF1-223ENST00000496360 LINC00643Q86TS7 51 aa11.21□□□□□ -0.61
MACF1-223ENST00000496360 EEF1AKMT3Q96AZ1 226 aa11.21□□□□□ -0.61
MACF1-223ENST00000496360 ZNF22P17026 224 aaPredicted RBP11.21□□□□□ -0.62
MACF1-223ENST00000496360 CXCL5P42830 114 aa11.21□□□□□ -0.62
MACF1-223ENST00000496360 RPS28P62857 69 aaKnown RBP11.21□□□□□ -0.62
MACF1-223ENST00000496360 C9orf153Q5TBE3 101 aa11.21□□□□□ -0.62
MACF1-223ENST00000496360 FAM19A4Q96LR4 140 aa11.21□□□□□ -0.62
MACF1-223ENST00000496360 CCL19Q99731 98 aa11.21□□□□□ -0.62
MACF1-223ENST00000496360 ZNF256Q9Y2P7 627 aaPredicted RBP11.21□□□□□ -0.62
MACF1-223ENST00000496360 CSDC2Q9Y534 153 aaKnown RBP11.21□□□□□ -0.62
MACF1-223ENST00000496360 MAP1AP78559 2803 aaPredicted RBP11.2□□□□□ -0.62
MACF1-223ENST00000496360 TRGV11A0A075B6L2 103 aa11.2□□□□□ -0.62
MACF1-223ENST00000496360 IGHV7-81A0A0B4J1V7 117 aa11.2□□□□□ -0.62
MACF1-223ENST00000496360 J3KT08 172 aa11.2□□□□□ -0.62
MACF1-223ENST00000496360 PRB3Q04118 309 aaPredicted RBP11.2□□□□□ -0.62
MACF1-223ENST00000496360 MINOS1Q5TGZ0 78 aa11.2□□□□□ -0.62
MACF1-223ENST00000496360 MINOS1-NBL1R4GNA1 71 aa11.2□□□□□ -0.62
MACF1-223ENST00000496360 RNASE3P12724 160 aaKnown RBP11.2□□□□□ -0.62
MACF1-223ENST00000496360 RPL39P62891 51 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms