RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 Q8N8P6 123 aa1.01□□□□□ -2.25
SSR3-208ENST00000496050 CEP350Q5VT06 3117 aa1.01□□□□□ -2.25
SSR3-208ENST00000496050 MYH9P35579 1960 aaKnown RBP1.01□□□□□ -2.25
SSR3-208ENST00000496050 SETD2Q9BYW2 2564 aaPredicted RBP1.01□□□□□ -2.25
SSR3-208ENST00000496050 QRICH2Q9H0J4 1663 aa1□□□□□ -2.25
SSR3-208ENST00000496050 LRP5O75197 1615 aa1□□□□□ -2.25
SSR3-208ENST00000496050 ABCA2Q9BZC7 2435 aa1□□□□□ -2.25
SSR3-208ENST00000496050 A0A0C4DFX4 3053 aa1□□□□□ -2.25
SSR3-208ENST00000496050 MAPKBP1O60336 1514 aa1□□□□□ -2.25
SSR3-208ENST00000496050 PTPRMP28827 1452 aa1□□□□□ -2.25
SSR3-208ENST00000496050 DAPK1P53355 1430 aa1□□□□□ -2.25
SSR3-208ENST00000496050 TRAV17A0A0B4J275 112 aa1□□□□□ -2.25
SSR3-208ENST00000496050 IFITM1P13164 125 aa1□□□□□ -2.25
SSR3-208ENST00000496050 UBE2G1P62253 170 aa1□□□□□ -2.25
SSR3-208ENST00000496050 IQCJQ1A5X6 159 aa1□□□□□ -2.25
SSR3-208ENST00000496050 SLC48A1Q6P1K1 146 aa1□□□□□ -2.25
SSR3-208ENST00000496050 GTF2H5Q6ZYL4 71 aa1□□□□□ -2.25
SSR3-208ENST00000496050 TSKUQ8WUA8 353 aa1□□□□□ -2.25
SSR3-208ENST00000496050 PTPN13Q12923 2485 aa1□□□□□ -2.25
SSR3-208ENST00000496050 SPAG17Q6Q759 2223 aa1□□□□□ -2.25
SSR3-208ENST00000496050 IFT140Q96RY7 1462 aa0.99□□□□□ -2.25
SSR3-208ENST00000496050 PIGBOS1A0A0B4J2F0 54 aa0.99□□□□□ -2.25
SSR3-208ENST00000496050 LOC101927531A0A1B0GV80 90 aa0.99□□□□□ -2.25
SSR3-208ENST00000496050 FXYD1O00168 92 aa0.99□□□□□ -2.25
SSR3-208ENST00000496050 IFNA17P01571 189 aa0.99□□□□□ -2.25
SSR3-208ENST00000496050 CCKP06307 115 aa0.99□□□□□ -2.25
SSR3-208ENST00000496050 C9orf153Q5TBE3 101 aa0.99□□□□□ -2.25
SSR3-208ENST00000496050 C4orf33Q8N1A6 199 aa0.99□□□□□ -2.25
SSR3-208ENST00000496050 C5orf56Q8N8D9 126 aa0.99□□□□□ -2.25
SSR3-208ENST00000496050 LINC00208Q96KT6 92 aa0.99□□□□□ -2.25
SSR3-208ENST00000496050 MACF1Q9UPN3 7388 aaKnown RBP0.99□□□□□ -2.25
SSR3-208ENST00000496050 ZFYVE16Q7Z3T8 1539 aa0.99□□□□□ -2.25
SSR3-208ENST00000496050 CNTLNQ9NXG0 1405 aa0.98□□□□□ -2.25
SSR3-208ENST00000496050 A6NIN4 97 aa0.98□□□□□ -2.25
SSR3-208ENST00000496050 M0R143 59 aa0.98□□□□□ -2.25
SSR3-208ENST00000496050 SPINK8P0C7L1 97 aa0.98□□□□□ -2.25
SSR3-208ENST00000496050 NPC2P61916 151 aa0.98□□□□□ -2.25
SSR3-208ENST00000496050 CCL8P80075 99 aa0.98□□□□□ -2.25
SSR3-208ENST00000496050 SVBPQ8N300 66 aa0.98□□□□□ -2.25
SSR3-208ENST00000496050 TTC9CQ8N5M4 171 aa0.98□□□□□ -2.25
SSR3-208ENST00000496050 IFI27L1Q96BM0 104 aa0.98□□□□□ -2.25
SSR3-208ENST00000496050 AQP10Q96PS8 301 aa0.98□□□□□ -2.25
SSR3-208ENST00000496050 DPH3P1Q9H4G8 78 aa0.98□□□□□ -2.25
SSR3-208ENST00000496050 PLXNA2O75051 1894 aa0.98□□□□□ -2.25
SSR3-208ENST00000496050 HMCN1Q96RW7 5635 aa0.98□□□□□ -2.25
SSR3-208ENST00000496050 KIAA0100Q14667 2235 aaKnown RBP0.97□□□□□ -2.25
SSR3-208ENST00000496050 TRAV12-3A0A0B4J271 114 aa0.97□□□□□ -2.25
SSR3-208ENST00000496050 TEX49A0A1B0GTD5 131 aa0.97□□□□□ -2.25
SSR3-208ENST00000496050 TCRBV3S1A0A5B6 114 aa0.97□□□□□ -2.25
SSR3-208ENST00000496050 TMEM262E9PQX1 116 aa0.97□□□□□ -2.25
SSR3-208ENST00000496050 H3BQ15 152 aa0.97□□□□□ -2.25
SSR3-208ENST00000496050 SSSCA1O60232 199 aa0.97□□□□□ -2.25
SSR3-208ENST00000496050 PKIAP61925 76 aa0.97□□□□□ -2.25
SSR3-208ENST00000496050 INSL4Q14641 139 aa0.97□□□□□ -2.25
SSR3-208ENST00000496050 RPL7L1Q6DKI1 246 aaKnown RBP0.97□□□□□ -2.25
SSR3-208ENST00000496050 C5orf38Q86SI9 138 aa0.97□□□□□ -2.25
SSR3-208ENST00000496050 DSCR8Q96T75 97 aa0.97□□□□□ -2.25
SSR3-208ENST00000496050 NCOR2Q9Y618 2525 aa0.97□□□□□ -2.25
SSR3-208ENST00000496050 STAB1Q9NY15 2570 aa0.97□□□□□ -2.25
SSR3-208ENST00000496050 LAMB1P07942 1786 aa0.96□□□□□ -2.26
SSR3-208ENST00000496050 VWFP04275 2813 aa0.96□□□□□ -2.26
SSR3-208ENST00000496050 TRBV10-3A0A0K0K1G6 114 aa0.96□□□□□ -2.26
SSR3-208ENST00000496050 FAM24AA6NFZ4 105 aa0.96□□□□□ -2.26
SSR3-208ENST00000496050 SIX6O95475 246 aa0.96□□□□□ -2.26
SSR3-208ENST00000496050 DCDP81605 110 aaKnown RBP0.96□□□□□ -2.26
SSR3-208ENST00000496050 NCMAPQ5T1S8 102 aa0.96□□□□□ -2.26
SSR3-208ENST00000496050 KRTAP5-10Q6L8G5 202 aa0.96□□□□□ -2.26
SSR3-208ENST00000496050 ZNF818PQ6ZRF7 136 aa0.96□□□□□ -2.26
SSR3-208ENST00000496050 NAV2Q8IVL1 2488 aa0.96□□□□□ -2.26
SSR3-208ENST00000496050 BLMP54132 1417 aaPredicted RBP0.96□□□□□ -2.26
SSR3-208ENST00000496050 ANKRD17O75179 2603 aaKnown RBP0.95□□□□□ -2.26
SSR3-208ENST00000496050 CUL7Q14999 1698 aa0.95□□□□□ -2.26
SSR3-208ENST00000496050 RREB1Q92766 1687 aa0.95□□□□□ -2.26
SSR3-208ENST00000496050 UBE2L5PA0A1B0GUS4 154 aa0.95□□□□□ -2.26
SSR3-208ENST00000496050 HCG22E2RYF7 251 aa0.95□□□□□ -2.26
SSR3-208ENST00000496050 MPC2O95563 127 aa0.95□□□□□ -2.26
SSR3-208ENST00000496050 LY6G6CO95867 125 aa0.95□□□□□ -2.26
SSR3-208ENST00000496050 TFF1P04155 84 aa0.95□□□□□ -2.26
SSR3-208ENST00000496050 UBE2D1P51668 147 aa0.95□□□□□ -2.26
SSR3-208ENST00000496050 UBE2L3P68036 154 aaKnown RBP0.95□□□□□ -2.26
SSR3-208ENST00000496050 RBM3P98179 157 aaKnown RBP0.95□□□□□ -2.26
SSR3-208ENST00000496050 ZNF56Q15929 161 aa0.95□□□□□ -2.26
SSR3-208ENST00000496050 S100A7L2Q5SY68 101 aa0.95□□□□□ -2.26
SSR3-208ENST00000496050 COMMD6Q7Z4G1 85 aa0.95□□□□□ -2.26
SSR3-208ENST00000496050 C10orf82Q8WW14 230 aa0.95□□□□□ -2.26
SSR3-208ENST00000496050 CYP4F30PQ9H0H9 118 aa0.95□□□□□ -2.26
SSR3-208ENST00000496050 ZNF609O15014 1411 aa0.95□□□□□ -2.26
SSR3-208ENST00000496050 NRKQ7Z2Y5 1582 aa0.95□□□□□ -2.26
SSR3-208ENST00000496050 ASH1LQ9NR48 2969 aaKnown RBP0.95□□□□□ -2.26
SSR3-208ENST00000496050 CHD6Q8TD26 2715 aa0.95□□□□□ -2.26
SSR3-208ENST00000496050 JMJD1CQ15652 2540 aa0.94□□□□□ -2.26
SSR3-208ENST00000496050 AHNAKQ09666 5890 aaKnown RBP0.94□□□□□ -2.26
SSR3-208ENST00000496050 AFDNP55196 1824 aaKnown RBP0.94□□□□□ -2.26
SSR3-208ENST00000496050 TNRC18O15417 2968 aaPredicted RBP0.94□□□□□ -2.26
SSR3-208ENST00000496050 COL6A5A8TX70 2615 aa0.94□□□□□ -2.26
SSR3-208ENST00000496050 KDM6BO15054 1643 aa0.94□□□□□ -2.26
SSR3-208ENST00000496050 ABCA4P78363 2273 aa0.94□□□□□ -2.26
SSR3-208ENST00000496050 TRAV13-2A0A0B4J235 113 aa0.94□□□□□ -2.26
SSR3-208ENST00000496050 CLPSL1A2RUU4 121 aa0.94□□□□□ -2.26
SSR3-208ENST00000496050 ATP5EP56381 51 aaPredicted RBP0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms