RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 NEXN-AS1Q8NBZ9 246 aa8.29□□□□□ -1.08
CSNK1E-213ENST00000495232 ANAPC16Q96DE5 110 aa8.29□□□□□ -1.08
CSNK1E-213ENST00000495232 M0QY20 66 aa8.28□□□□□ -1.08
CSNK1E-213ENST00000495232 LINC00694P0DN24 101 aa8.28□□□□□ -1.08
CSNK1E-213ENST00000495232 UBE2D3P61077 147 aa8.28□□□□□ -1.08
CSNK1E-213ENST00000495232 UBE2D2P62837 147 aa8.28□□□□□ -1.08
CSNK1E-213ENST00000495232 RASL11AQ6T310 242 aa8.28□□□□□ -1.08
CSNK1E-213ENST00000495232 DNAJC30Q96LL9 226 aa8.28□□□□□ -1.08
CSNK1E-213ENST00000495232 SEC11CQ9BY50 192 aa8.28□□□□□ -1.08
CSNK1E-213ENST00000495232 IGHV3-38A0A0C4DH36 116 aa8.27□□□□□ -1.09
CSNK1E-213ENST00000495232 A0A1B0GW15 77 aa8.27□□□□□ -1.09
CSNK1E-213ENST00000495232 C1orf134Q5TEV5 83 aa8.27□□□□□ -1.09
CSNK1E-213ENST00000495232 Q6ZR54 194 aa8.27□□□□□ -1.09
CSNK1E-213ENST00000495232 DAZ4Q86SG3 579 aaKnown RBP8.27□□□□□ -1.09
CSNK1E-213ENST00000495232 WFDC10BQ8IUB3 73 aa8.27□□□□□ -1.09
CSNK1E-213ENST00000495232 TMEM191AQ9H0A3 160 aa8.27□□□□□ -1.09
CSNK1E-213ENST00000495232 NIT2Q9NQR4 276 aa8.27□□□□□ -1.09
CSNK1E-213ENST00000495232 DAZ3Q9NR90 486 aaKnown RBP8.27□□□□□ -1.09
CSNK1E-213ENST00000495232 DNAH2Q9P225 4427 aa8.26□□□□□ -1.09
CSNK1E-213ENST00000495232 K7EP13 123 aa8.26□□□□□ -1.09
CSNK1E-213ENST00000495232 S100A8P05109 93 aa8.26□□□□□ -1.09
CSNK1E-213ENST00000495232 TMEM97Q5BJF2 176 aa8.26□□□□□ -1.09
CSNK1E-213ENST00000495232 FRZBQ92765 325 aa8.26□□□□□ -1.09
CSNK1E-213ENST00000495232 TRAV26-2A0A0B4J265 109 aa8.25□□□□□ -1.09
CSNK1E-213ENST00000495232 DNAH10OSP0CZ25 163 aa8.25□□□□□ -1.09
CSNK1E-213ENST00000495232 ADCYAP1P18509 176 aa8.25□□□□□ -1.09
CSNK1E-213ENST00000495232 CAMPP49913 170 aa8.25□□□□□ -1.09
CSNK1E-213ENST00000495232 MRPL54Q6P161 138 aaKnown RBP8.25□□□□□ -1.09
CSNK1E-213ENST00000495232 KCNIP4Q6PIL6 250 aa8.25□□□□□ -1.09
CSNK1E-213ENST00000495232 C6orf223Q8N319 242 aa8.25□□□□□ -1.09
CSNK1E-213ENST00000495232 C10orf126Q8N4M7 172 aa8.25□□□□□ -1.09
CSNK1E-213ENST00000495232 GATD1Q8NB37 220 aa8.25□□□□□ -1.09
CSNK1E-213ENST00000495232 URGCP-MRPS24S4R325 110 aa8.25□□□□□ -1.09
CSNK1E-213ENST00000495232 HBBP68871 147 aa8.24□□□□□ -1.09
CSNK1E-213ENST00000495232 DNAH10Q8IVF4 4471 aa8.24□□□□□ -1.09
CSNK1E-213ENST00000495232 FRAS1Q86XX4 4008 aa8.23□□□□□ -1.09
CSNK1E-213ENST00000495232 TRBV6-8A0A0A6YYG3 113 aa8.23□□□□□ -1.09
CSNK1E-213ENST00000495232 TMEM262E9PQX1 116 aa8.23□□□□□ -1.09
CSNK1E-213ENST00000495232 BTF3P20290 206 aaKnown RBP8.23□□□□□ -1.09
CSNK1E-213ENST00000495232 LINC01556Q5JQF7 62 aa8.23□□□□□ -1.09
CSNK1E-213ENST00000495232 LINC00336Q6ZUF6 198 aa8.23□□□□□ -1.09
CSNK1E-213ENST00000495232 ATP5L2Q7Z4Y8 100 aa8.23□□□□□ -1.09
CSNK1E-213ENST00000495232 AMN1Q8IY45 258 aa8.23□□□□□ -1.09
CSNK1E-213ENST00000495232 MRAP2Q96G30 205 aa8.23□□□□□ -1.09
CSNK1E-213ENST00000495232 CTDSP1Q9GZU7 261 aa8.23□□□□□ -1.09
CSNK1E-213ENST00000495232 TRBV25-1A0A075B6N4 114 aa8.22□□□□□ -1.09
CSNK1E-213ENST00000495232 A0A087WX48 190 aa8.22□□□□□ -1.09
CSNK1E-213ENST00000495232 IGHV3-30P01768 117 aa8.22□□□□□ -1.09
CSNK1E-213ENST00000495232 IGHV3-33P01772 117 aa8.22□□□□□ -1.09
CSNK1E-213ENST00000495232 IGHV3-30-3P0DP02 117 aa8.22□□□□□ -1.09
CSNK1E-213ENST00000495232 IGHV3-30-5P0DP03 117 aa8.22□□□□□ -1.09
CSNK1E-213ENST00000495232 RAB4AP20338 218 aa8.22□□□□□ -1.09
CSNK1E-213ENST00000495232 NDUFA5Q16718 116 aa8.22□□□□□ -1.09
CSNK1E-213ENST00000495232 PPP1R17O96001 155 aa8.21□□□□□ -1.1
CSNK1E-213ENST00000495232 PKIAP61925 76 aa8.21□□□□□ -1.1
CSNK1E-213ENST00000495232 COTL1Q14019 142 aa8.21□□□□□ -1.1
CSNK1E-213ENST00000495232 C10orf91Q5T1B1 145 aa8.21□□□□□ -1.1
CSNK1E-213ENST00000495232 FAM104BQ5XKR9 115 aa8.21□□□□□ -1.1
CSNK1E-213ENST00000495232 NFE4Q86UQ8 179 aa8.21□□□□□ -1.1
CSNK1E-213ENST00000495232 RPL39LQ96EH5 51 aaKnown RBP8.21□□□□□ -1.1
CSNK1E-213ENST00000495232 RNF185Q96GF1 192 aa8.21□□□□□ -1.1
CSNK1E-213ENST00000495232 BTF3L4Q96K17 158 aa8.21□□□□□ -1.1
CSNK1E-213ENST00000495232 IMMP2LQ96T52 175 aa8.21□□□□□ -1.1
CSNK1E-213ENST00000495232 CHCHD5Q9BSY4 110 aa8.21□□□□□ -1.1
CSNK1E-213ENST00000495232 KRTAP1-5Q9BYS1 174 aa8.21□□□□□ -1.1
CSNK1E-213ENST00000495232 CARHSP1Q9Y2V2 147 aaKnown RBP8.21□□□□□ -1.1
CSNK1E-213ENST00000495232 IGHV1-24A0A0C4DH33 117 aa8.2□□□□□ -1.1
CSNK1E-213ENST00000495232 PRSS29PA6NIE9 313 aa8.2□□□□□ -1.1
CSNK1E-213ENST00000495232 RTL8CO15255 209 aa8.2□□□□□ -1.1
CSNK1E-213ENST00000495232 PMCHP20382 165 aa8.2□□□□□ -1.1
CSNK1E-213ENST00000495232 S100PP25815 95 aa8.2□□□□□ -1.1
CSNK1E-213ENST00000495232 RHEBQ15382 184 aa8.2□□□□□ -1.1
CSNK1E-213ENST00000495232 ST20Q9HBF5 79 aa8.2□□□□□ -1.1
CSNK1E-213ENST00000495232 A0A1B0GXF2 115 aa8.19□□□□□ -1.1
CSNK1E-213ENST00000495232 SDHAF1A6NFY7 115 aa8.19□□□□□ -1.1
CSNK1E-213ENST00000495232 UBE2L6O14933 153 aa8.19□□□□□ -1.1
CSNK1E-213ENST00000495232 APOC3P02656 99 aa8.19□□□□□ -1.1
CSNK1E-213ENST00000495232 CKS2P33552 79 aa8.19□□□□□ -1.1
CSNK1E-213ENST00000495232 ELOBQ15370 118 aa8.19□□□□□ -1.1
CSNK1E-213ENST00000495232 MRPL51Q4U2R6 128 aaKnown RBP8.19□□□□□ -1.1
CSNK1E-213ENST00000495232 NIT1Q86X76 327 aa8.19□□□□□ -1.1
CSNK1E-213ENST00000495232 CHCHD7Q9BUK0 85 aa8.19□□□□□ -1.1
CSNK1E-213ENST00000495232 RPS10P5Q9NQ39 176 aa8.19□□□□□ -1.1
CSNK1E-213ENST00000495232 TRBV6-5A0A0K0K1A5 114 aa8.18□□□□□ -1.1
CSNK1E-213ENST00000495232 C7orf77A4D0Y5 90 aa8.18□□□□□ -1.1
CSNK1E-213ENST00000495232 IBA57-AS1B1ANH7 110 aa8.18□□□□□ -1.1
CSNK1E-213ENST00000495232 I3L3M4 83 aa8.18□□□□□ -1.1
CSNK1E-213ENST00000495232 NCR2O95944 276 aa8.18□□□□□ -1.1
CSNK1E-213ENST00000495232 AMTP48728 403 aa8.18□□□□□ -1.1
CSNK1E-213ENST00000495232 IQCJQ1A5X6 159 aa8.18□□□□□ -1.1
CSNK1E-213ENST00000495232 NTM-AS1Q6ZSK4 140 aa8.18□□□□□ -1.1
CSNK1E-213ENST00000495232 SVBPQ8N300 66 aa8.18□□□□□ -1.1
CSNK1E-213ENST00000495232 CLRN3Q8NCR9 226 aa8.18□□□□□ -1.1
CSNK1E-213ENST00000495232 TMEM243Q9BU79 118 aa8.18□□□□□ -1.1
CSNK1E-213ENST00000495232 TMEM242Q9NWH2 141 aa8.18□□□□□ -1.1
CSNK1E-213ENST00000495232 SMKR1H3BMG3 65 aa8.17□□□□□ -1.1
CSNK1E-213ENST00000495232 SNAPINO95295 136 aa8.17□□□□□ -1.1
CSNK1E-213ENST00000495232 LAGE3Q14657 143 aa8.17□□□□□ -1.1
CSNK1E-213ENST00000495232 DEFB104AQ8WTQ1 72 aa8.17□□□□□ -1.1
CSNK1E-213ENST00000495232 Q9HAA7 133 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 223.9 ms