RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 RNASE3P12724 160 aaKnown RBP10.1□□□□□ -0.79
GPC1-209ENST00000495100 RPL35AP18077 110 aaKnown RBP10.1□□□□□ -0.79
GPC1-209ENST00000495100 PAX2Q02962 417 aa10.1□□□□□ -0.79
GPC1-209ENST00000495100 GPHB5Q86YW7 130 aa10.1□□□□□ -0.79
GPC1-209ENST00000495100 Q9UF83 564 aa10.1□□□□□ -0.79
GPC1-209ENST00000495100 INSL3P51460 131 aa10.1□□□□□ -0.79
GPC1-209ENST00000495100 ZFP2Q6ZN57 461 aa10.1□□□□□ -0.79
GPC1-209ENST00000495100 SETXQ7Z333 2677 aaKnown RBP10.09□□□□□ -0.79
GPC1-209ENST00000495100 TOMM7Q9P0U1 55 aa10.09□□□□□ -0.79
GPC1-209ENST00000495100 U3KQK5 164 aa10.09□□□□□ -0.79
GPC1-209ENST00000495100 TRAV8-3A0A0A6YYJ7 113 aa10.09□□□□□ -0.79
GPC1-209ENST00000495100 IGHG2P01859 326 aa10.09□□□□□ -0.79
GPC1-209ENST00000495100 TRAV13-1A0A0B4J241 112 aa10.08□□□□□ -0.8
GPC1-209ENST00000495100 Q96MF0 132 aa10.08□□□□□ -0.8
GPC1-209ENST00000495100 C11orf68Q9H3H3 251 aaKnown RBP10.08□□□□□ -0.8
GPC1-209ENST00000495100 TRGV1A0A0A0MS02 117 aa10.08□□□□□ -0.8
GPC1-209ENST00000495100 TRBV6-1A0A0K0K1D8 114 aa10.08□□□□□ -0.8
GPC1-209ENST00000495100 IGLL5B9A064 214 aa10.08□□□□□ -0.8
GPC1-209ENST00000495100 VCYO14598 125 aa10.08□□□□□ -0.8
GPC1-209ENST00000495100 CDKN1BP46527 198 aa10.08□□□□□ -0.8
GPC1-209ENST00000495100 J3QR89 54 aa10.07□□□□□ -0.8
GPC1-209ENST00000495100 ZNF48Q96MX3 618 aaPredicted RBP10.07□□□□□ -0.8
GPC1-209ENST00000495100 NBEAL1Q6ZS30 2694 aa10.07□□□□□ -0.8
GPC1-209ENST00000495100 MRAP2Q96G30 205 aa10.07□□□□□ -0.8
GPC1-209ENST00000495100 GEMIN7Q9H840 131 aaKnown RBP10.07□□□□□ -0.8
GPC1-209ENST00000495100 IGHV1OR15-1A0A075B7D0 117 aa10.07□□□□□ -0.8
GPC1-209ENST00000495100 RBAKDNA6NC62 111 aa10.07□□□□□ -0.8
GPC1-209ENST00000495100 NSUN5P1Q3KNT7 163 aa10.06□□□□□ -0.8
GPC1-209ENST00000495100 LGALS1P09382 135 aaKnown RBP10.06□□□□□ -0.8
GPC1-209ENST00000495100 A6NDX4 124 aa10.05□□□□□ -0.8
GPC1-209ENST00000495100 SPINK8P0C7L1 97 aa10.05□□□□□ -0.8
GPC1-209ENST00000495100 TMEM61Q8N0U2 210 aa10.05□□□□□ -0.8
GPC1-209ENST00000495100 ZNF575Q86XF7 245 aa10.04□□□□□ -0.8
GPC1-209ENST00000495100 LINC01356Q8N9X3 169 aa10.04□□□□□ -0.8
GPC1-209ENST00000495100 TMEM238LA0A1B0GVL6 79 aa10.04□□□□□ -0.8
GPC1-209ENST00000495100 A6NJY4 79 aa10.04□□□□□ -0.8
GPC1-209ENST00000495100 PMVKQ15126 192 aa10.04□□□□□ -0.8
GPC1-209ENST00000495100 F8P00451 2351 aa10.04□□□□□ -0.8
GPC1-209ENST00000495100 A0A096LPF7 62 aa10.03□□□□□ -0.8
GPC1-209ENST00000495100 SAMD13Q5VXD3 122 aa10.03□□□□□ -0.8
GPC1-209ENST00000495100 OR5A1Q8NGJ0 315 aa10.03□□□□□ -0.8
GPC1-209ENST00000495100 J3QQQ9 107 aa10.02□□□□□ -0.8
GPC1-209ENST00000495100 WFDC10AQ9H1F0 79 aa10.02□□□□□ -0.8
GPC1-209ENST00000495100 C9JAW5 83 aa10.02□□□□□ -0.81
GPC1-209ENST00000495100 TRGV2A0A075B6R0 118 aa10.02□□□□□ -0.81
GPC1-209ENST00000495100 ZNRF2Q8NHG8 242 aa10.02□□□□□ -0.81
GPC1-209ENST00000495100 AZU1P20160 251 aa10.01□□□□□ -0.81
GPC1-209ENST00000495100 MEIG1Q5JSS6 88 aa10.01□□□□□ -0.81
GPC1-209ENST00000495100 SPAG8Q99932 426 aaPredicted RBP10.01□□□□□ -0.81
GPC1-209ENST00000495100 C20orf78Q9BR46 151 aa10.01□□□□□ -0.81
GPC1-209ENST00000495100 APCP25054 2843 aa10.01□□□□□ -0.81
GPC1-209ENST00000495100 IGLV2-18A0A075B6J9 118 aa10.01□□□□□ -0.81
GPC1-209ENST00000495100 GAGE12JA6NER3 117 aa10.01□□□□□ -0.81
GPC1-209ENST00000495100 GAGE4Q13068 117 aa10.01□□□□□ -0.81
GPC1-209ENST00000495100 GAGE5Q13069 117 aa10.01□□□□□ -0.81
GPC1-209ENST00000495100 Q6ZSV7 163 aa10.01□□□□□ -0.81
GPC1-209ENST00000495100 STHQ8IWL8 128 aa10.01□□□□□ -0.81
GPC1-209ENST00000495100 TOMM6Q96B49 74 aa10.01□□□□□ -0.81
GPC1-209ENST00000495100 ESM1Q9NQ30 184 aa10.01□□□□□ -0.81
GPC1-209ENST00000495100 TRPT1Q86TN4 253 aaKnown RBP10□□□□□ -0.81
GPC1-209ENST00000495100 YAE1D1Q9NRH1 226 aa10□□□□□ -0.81
GPC1-209ENST00000495100 A4D1N5 150 aa10□□□□□ -0.81
GPC1-209ENST00000495100 RRN3P1Q2M238 152 aa10□□□□□ -0.81
GPC1-209ENST00000495100 NEXN-AS1Q8NBZ9 246 aa10□□□□□ -0.81
GPC1-209ENST00000495100 A0A0J9YX75 114 aa9.99□□□□□ -0.81
GPC1-209ENST00000495100 DLX4Q92988 240 aaPredicted RBP9.99□□□□□ -0.81
GPC1-209ENST00000495100 NDUFA7O95182 113 aa9.99□□□□□ -0.81
GPC1-209ENST00000495100 DEFB130BP0DP73 79 aa9.99□□□□□ -0.81
GPC1-209ENST00000495100 DEFB130AP0DP74 79 aa9.99□□□□□ -0.81
GPC1-209ENST00000495100 PLA2G2AP14555 144 aa9.99□□□□□ -0.81
GPC1-209ENST00000495100 DCANP1Q8TF63 244 aa9.99□□□□□ -0.81
GPC1-209ENST00000495100 NOTCH1P46531 2555 aa9.99□□□□□ -0.81
GPC1-209ENST00000495100 TSPEAR-AS2P59090 65 aa9.99□□□□□ -0.81
GPC1-209ENST00000495100 FOXI2Q6ZQN5 318 aa9.99□□□□□ -0.81
GPC1-209ENST00000495100 PRORYQ9H606 182 aa9.98□□□□□ -0.81
GPC1-209ENST00000495100 U3KQE9 123 aa9.98□□□□□ -0.81
GPC1-209ENST00000495100 MAST4O15021 2626 aa9.98□□□□□ -0.81
GPC1-209ENST00000495100 CLPSL2Q6UWE3 100 aa9.98□□□□□ -0.81
GPC1-209ENST00000495100 CNFNQ9BYD5 112 aa9.98□□□□□ -0.81
GPC1-209ENST00000495100 NDUFS8O00217 210 aa9.98□□□□□ -0.81
GPC1-209ENST00000495100 PPP1R17O96001 155 aa9.98□□□□□ -0.81
GPC1-209ENST00000495100 BBC3Q96PG8 261 aaPredicted RBP9.98□□□□□ -0.81
GPC1-209ENST00000495100 VPREB3Q9UKI3 123 aa9.98□□□□□ -0.81
GPC1-209ENST00000495100 WFDC11Q8NEX6 87 aa9.97□□□□□ -0.81
GPC1-209ENST00000495100 SIGMAR1Q99720 223 aa9.97□□□□□ -0.81
GPC1-209ENST00000495100 TIMM21Q9BVV7 248 aa9.97□□□□□ -0.81
GPC1-209ENST00000495100 TMEM262E9PQX1 116 aa9.97□□□□□ -0.81
GPC1-209ENST00000495100 SIVA1O15304 175 aa9.97□□□□□ -0.81
GPC1-209ENST00000495100 GAGE7O76087 117 aa9.97□□□□□ -0.81
GPC1-209ENST00000495100 GAGE12FP0CL80 117 aa9.97□□□□□ -0.81
GPC1-209ENST00000495100 GAGE12GP0CL81 117 aa9.97□□□□□ -0.81
GPC1-209ENST00000495100 GAGE12IP0CL82 117 aa9.97□□□□□ -0.81
GPC1-209ENST00000495100 MUSTN1Q8IVN3 82 aa9.97□□□□□ -0.81
GPC1-209ENST00000495100 MGAM2Q2M2H8 2515 aa9.96□□□□□ -0.81
GPC1-209ENST00000495100 HTN3P15516 51 aa9.96□□□□□ -0.81
GPC1-209ENST00000495100 CRIP2P52943 208 aaPredicted RBP9.96□□□□□ -0.81
GPC1-209ENST00000495100 MRPL53Q96EL3 112 aaKnown RBP9.96□□□□□ -0.81
GPC1-209ENST00000495100 ERG28Q9UKR5 140 aa9.96□□□□□ -0.81
GPC1-209ENST00000495100 I3L3M4 83 aa9.96□□□□□ -0.82
GPC1-209ENST00000495100 GAGE12HA6NDE8 117 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms