RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.51□□□□□ -1.85
PRKD3-210ENST00000494667 MGPP08493 103 aa3.51□□□□□ -1.85
PRKD3-210ENST00000494667 ZNF576Q9H609 170 aa3.51□□□□□ -1.85
PRKD3-210ENST00000494667 FAM223BA6NKX1 122 aa3.5□□□□□ -1.85
PRKD3-210ENST00000494667 APELAP0DMC3 54 aa3.5□□□□□ -1.85
PRKD3-210ENST00000494667 FP248Q71RG6 208 aaPredicted RBP3.5□□□□□ -1.85
PRKD3-210ENST00000494667 CNEP1R1Q8N9A8 125 aa3.5□□□□□ -1.85
PRKD3-210ENST00000494667 TRAV7A0A075B6U4 112 aa3.5□□□□□ -1.85
PRKD3-210ENST00000494667 M0R1W7 72 aa3.5□□□□□ -1.85
PRKD3-210ENST00000494667 NDPQ00604 133 aa3.5□□□□□ -1.85
PRKD3-210ENST00000494667 C20orf173Q96LM9 149 aa3.5□□□□□ -1.85
PRKD3-210ENST00000494667 XCL1P47992 114 aa3.5□□□□□ -1.85
PRKD3-210ENST00000494667 CIRBPQ14011 172 aaKnown RBP3.5□□□□□ -1.85
PRKD3-210ENST00000494667 C19orf54Q5BKX5 351 aa3.5□□□□□ -1.85
PRKD3-210ENST00000494667 HIST2H2BCQ6DN03 193 aa3.5□□□□□ -1.85
PRKD3-210ENST00000494667 HIST2H2BDQ6DRA6 164 aa3.5□□□□□ -1.85
PRKD3-210ENST00000494667 CCDC140Q96MF4 163 aa3.5□□□□□ -1.85
PRKD3-210ENST00000494667 DPM3Q9P2X0 92 aa3.5□□□□□ -1.85
PRKD3-210ENST00000494667 XCL2Q9UBD3 114 aa3.5□□□□□ -1.85
PRKD3-210ENST00000494667 ZNF580Q9UK33 172 aa3.5□□□□□ -1.85
PRKD3-210ENST00000494667 MALRD1Q5VYJ5 2156 aa3.5□□□□□ -1.85
PRKD3-210ENST00000494667 H0YGX0 51 aa3.49□□□□□ -1.85
PRKD3-210ENST00000494667 AVPP01185 164 aa3.49□□□□□ -1.85
PRKD3-210ENST00000494667 PRSS2P07478 247 aa3.49□□□□□ -1.85
PRKD3-210ENST00000494667 FAM218AQ96MZ4 157 aa3.49□□□□□ -1.85
PRKD3-210ENST00000494667 LINC00846Q9NV44 126 aa3.49□□□□□ -1.85
PRKD3-210ENST00000494667 V9GYY9 64 aa3.49□□□□□ -1.85
PRKD3-210ENST00000494667 INTS1Q8N201 2190 aaKnown RBP3.49□□□□□ -1.85
PRKD3-210ENST00000494667 TRAV13-2A0A0B4J235 113 aa3.49□□□□□ -1.85
PRKD3-210ENST00000494667 IBA57-AS1B1ANH7 110 aa3.49□□□□□ -1.85
PRKD3-210ENST00000494667 DNAL4O96015 105 aa3.49□□□□□ -1.85
PRKD3-210ENST00000494667 CCKP06307 115 aa3.49□□□□□ -1.85
PRKD3-210ENST00000494667 S100A4P26447 101 aaKnown RBP3.49□□□□□ -1.85
PRKD3-210ENST00000494667 ERC2-IT1O76042 136 aa3.49□□□□□ -1.85
PRKD3-210ENST00000494667 Q6ZSV7 163 aa3.49□□□□□ -1.85
PRKD3-210ENST00000494667 ZNF625Q96I27 306 aaPredicted RBP3.49□□□□□ -1.85
PRKD3-210ENST00000494667 MUC4Q99102 2169 aa3.49□□□□□ -1.85
PRKD3-210ENST00000494667 IGHV7-81A0A0B4J1V7 117 aa3.48□□□□□ -1.85
PRKD3-210ENST00000494667 KNCNA6PVL3 124 aa3.48□□□□□ -1.85
PRKD3-210ENST00000494667 MINOS1Q5TGZ0 78 aa3.48□□□□□ -1.85
PRKD3-210ENST00000494667 TMEM243Q9BU79 118 aa3.48□□□□□ -1.85
PRKD3-210ENST00000494667 MINOS1-NBL1R4GNA1 71 aa3.48□□□□□ -1.85
PRKD3-210ENST00000494667 USP34Q70CQ2 3546 aa3.48□□□□□ -1.85
PRKD3-210ENST00000494667 IGHV3-16A0A0C4DH30 117 aa3.48□□□□□ -1.85
PRKD3-210ENST00000494667 RBMY1BA6NDE4 496 aaKnown RBP3.48□□□□□ -1.85
PRKD3-210ENST00000494667 RBMY1EA6NEQ0 496 aaKnown RBP3.48□□□□□ -1.85
PRKD3-210ENST00000494667 RBMY1DP0C7P1 496 aaKnown RBP3.48□□□□□ -1.85
PRKD3-210ENST00000494667 RBMY1A1P0DJD3 496 aaKnown RBP3.48□□□□□ -1.85
PRKD3-210ENST00000494667 RBMY1CP0DJD4 496 aa3.48□□□□□ -1.85
PRKD3-210ENST00000494667 RBMY1FQ15415 496 aaKnown RBP3.48□□□□□ -1.85
PRKD3-210ENST00000494667 C10orf105Q8TEF2 133 aa3.48□□□□□ -1.85
PRKD3-210ENST00000494667 LAMTOR3Q9UHA4 124 aa3.48□□□□□ -1.85
PRKD3-210ENST00000494667 RANBP2P49792 3224 aaKnown RBP3.48□□□□□ -1.85
PRKD3-210ENST00000494667 SOSTDC1Q6X4U4 206 aa3.48□□□□□ -1.85
PRKD3-210ENST00000494667 RNASE6Q93091 150 aaKnown RBP3.48□□□□□ -1.85
PRKD3-210ENST00000494667 LY6G6DO95868 133 aa3.48□□□□□ -1.85
PRKD3-210ENST00000494667 PRB4P10163 310 aaPredicted RBP3.48□□□□□ -1.85
PRKD3-210ENST00000494667 RPL35AP18077 110 aaKnown RBP3.48□□□□□ -1.85
PRKD3-210ENST00000494667 GNRH2O43555 120 aa3.47□□□□□ -1.85
PRKD3-210ENST00000494667 GHRHP01286 108 aa3.47□□□□□ -1.85
PRKD3-210ENST00000494667 IGF1P05019 195 aa3.47□□□□□ -1.85
PRKD3-210ENST00000494667 SS18Q15532 418 aa3.47□□□□□ -1.85
PRKD3-210ENST00000494667 C16orf92Q96LL3 132 aa3.47□□□□□ -1.85
PRKD3-210ENST00000494667 OPRPNQ99935 248 aaPredicted RBP3.47□□□□□ -1.85
PRKD3-210ENST00000494667 C5orf42Q9H799 3197 aa3.47□□□□□ -1.85
PRKD3-210ENST00000494667 TRBV12-3P01733 135 aa3.47□□□□□ -1.85
PRKD3-210ENST00000494667 FAM223AQ8IWN6 122 aa3.47□□□□□ -1.85
PRKD3-210ENST00000494667 CHCHD7Q9BUK0 85 aa3.47□□□□□ -1.85
PRKD3-210ENST00000494667 A0A1W2PRX2 142 aa3.47□□□□□ -1.85
PRKD3-210ENST00000494667 CD28P10747 220 aa3.47□□□□□ -1.85
PRKD3-210ENST00000494667 C1orf195Q5TG92 126 aa3.47□□□□□ -1.85
PRKD3-210ENST00000494667 LINC00482Q8N8I6 264 aa3.47□□□□□ -1.85
PRKD3-210ENST00000494667 Q8N9W7 124 aa3.47□□□□□ -1.85
PRKD3-210ENST00000494667 PRRC2AP48634 2157 aaKnown RBP3.47□□□□□ -1.85
PRKD3-210ENST00000494667 REV3LO60673 3130 aa3.47□□□□□ -1.85
PRKD3-210ENST00000494667 XIRP2A4UGR9 3374 aa3.47□□□□□ -1.85
PRKD3-210ENST00000494667 A0A1W2PNU3 283 aaPredicted RBP3.46□□□□□ -1.85
PRKD3-210ENST00000494667 JMJD7-PLA2G4BH0Y9G9 81 aa3.46□□□□□ -1.85
PRKD3-210ENST00000494667 NDUFA4O00483 81 aa3.46□□□□□ -1.85
PRKD3-210ENST00000494667 RPL11P62913 178 aaKnown RBP3.46□□□□□ -1.85
PRKD3-210ENST00000494667 C15orf32Q32M92 178 aa3.46□□□□□ -1.85
PRKD3-210ENST00000494667 C6orf226Q5I0X4 101 aa3.46□□□□□ -1.85
PRKD3-210ENST00000494667 PLXNB1O43157 2135 aa3.46□□□□□ -1.86
PRKD3-210ENST00000494667 Q6ZRU5 148 aa3.46□□□□□ -1.86
PRKD3-210ENST00000494667 PRR15Q8IV56 129 aa3.46□□□□□ -1.86
PRKD3-210ENST00000494667 FAM215AQ9Y5M1 114 aa3.46□□□□□ -1.86
PRKD3-210ENST00000494667 C1orf43Q9BWL3 253 aa3.46□□□□□ -1.86
PRKD3-210ENST00000494667 TRBV7-6A0A0J9YX20 115 aa3.46□□□□□ -1.86
PRKD3-210ENST00000494667 H3BUA1 57 aa3.46□□□□□ -1.86
PRKD3-210ENST00000494667 S4R3C0 116 aa3.46□□□□□ -1.86
PRKD3-210ENST00000494667 SVILO95425 2214 aa3.45□□□□□ -1.86
PRKD3-210ENST00000494667 ARHGAP32A7KAX9 2087 aa3.45□□□□□ -1.86
PRKD3-210ENST00000494667 A0A087WVE0 104 aa3.45□□□□□ -1.86
PRKD3-210ENST00000494667 LINC00467Q9BRT7 94 aa3.45□□□□□ -1.86
PRKD3-210ENST00000494667 DNAJC13O75165 2243 aa3.45□□□□□ -1.86
PRKD3-210ENST00000494667 IGHV3-64A0A075B6Q5 118 aa3.45□□□□□ -1.86
PRKD3-210ENST00000494667 A8MTW9 85 aa3.45□□□□□ -1.86
PRKD3-210ENST00000494667 ADARB2-AS1A8MUL3 147 aa3.45□□□□□ -1.86
PRKD3-210ENST00000494667 OXLD1Q5BKU9 147 aa3.45□□□□□ -1.86
PRKD3-210ENST00000494667 LOC110117498A0A087WWA1 95 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms