RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 GAGE12JA6NER3 117 aa5.94□□□□□ -1.46
ITGB1-217ENST00000494395 F2Z2F3 143 aa5.94□□□□□ -1.46
ITGB1-217ENST00000494395 RAB4BP61018 213 aa5.94□□□□□ -1.46
ITGB1-217ENST00000494395 GAGE1Q13065 139 aa5.94□□□□□ -1.46
ITGB1-217ENST00000494395 GAGE4Q13068 117 aa5.94□□□□□ -1.46
ITGB1-217ENST00000494395 GAGE5Q13069 117 aa5.94□□□□□ -1.46
ITGB1-217ENST00000494395 LELP1Q5T871 98 aa5.94□□□□□ -1.46
ITGB1-217ENST00000494395 SPANXN1Q5VSR9 72 aa5.94□□□□□ -1.46
ITGB1-217ENST00000494395 LYZL1Q6UWQ5 148 aa5.94□□□□□ -1.46
ITGB1-217ENST00000494395 LINC01551Q86U37 167 aa5.94□□□□□ -1.46
ITGB1-217ENST00000494395 OR10G8Q8NGN5 311 aa5.94□□□□□ -1.46
ITGB1-217ENST00000494395 GTSF1LQ9H1H1 148 aa5.94□□□□□ -1.46
ITGB1-217ENST00000494395 PKHD1P08F94 4074 aa5.94□□□□□ -1.46
ITGB1-217ENST00000494395 PKD1P98161 4303 aa5.93□□□□□ -1.46
ITGB1-217ENST00000494395 ZNF727A8MUV8 499 aa5.93□□□□□ -1.46
ITGB1-217ENST00000494395 CEBPGP53567 150 aa5.93□□□□□ -1.46
ITGB1-217ENST00000494395 CACNG7P62955 275 aa5.93□□□□□ -1.46
ITGB1-217ENST00000494395 LINC01556Q5JQF7 62 aa5.93□□□□□ -1.46
ITGB1-217ENST00000494395 SOHLH1Q5JUK2 328 aa5.93□□□□□ -1.46
ITGB1-217ENST00000494395 WDR73Q6P4I2 378 aa5.93□□□□□ -1.46
ITGB1-217ENST00000494395 NEXN-AS1Q8NBZ9 246 aa5.93□□□□□ -1.46
ITGB1-217ENST00000494395 GTSF1Q8WW33 167 aa5.93□□□□□ -1.46
ITGB1-217ENST00000494395 AP1S3Q96PC3 154 aa5.93□□□□□ -1.46
ITGB1-217ENST00000494395 K7EP13 123 aa5.92□□□□□ -1.46
ITGB1-217ENST00000494395 NTF3P20783 257 aa5.92□□□□□ -1.46
ITGB1-217ENST00000494395 UBE2D3P61077 147 aa5.92□□□□□ -1.46
ITGB1-217ENST00000494395 UBE2D2P62837 147 aa5.92□□□□□ -1.46
ITGB1-217ENST00000494395 ZNF56Q15929 161 aa5.92□□□□□ -1.46
ITGB1-217ENST00000494395 TPPP3Q9BW30 176 aa5.92□□□□□ -1.46
ITGB1-217ENST00000494395 SMDT1Q9H4I9 107 aa5.92□□□□□ -1.46
ITGB1-217ENST00000494395 TRBV7-3A0A075B6L6 115 aa5.91□□□□□ -1.46
ITGB1-217ENST00000494395 IGHV3-38A0A0C4DH36 116 aa5.91□□□□□ -1.46
ITGB1-217ENST00000494395 GATCO43716 136 aaKnown RBP5.91□□□□□ -1.46
ITGB1-217ENST00000494395 EVI2AP22794 236 aa5.91□□□□□ -1.46
ITGB1-217ENST00000494395 FOXA3P55318 350 aaPredicted RBP5.91□□□□□ -1.46
ITGB1-217ENST00000494395 SSTP61278 116 aa5.91□□□□□ -1.46
ITGB1-217ENST00000494395 RPL23P62829 140 aaKnown RBP5.91□□□□□ -1.46
ITGB1-217ENST00000494395 RPL36AP83881 106 aaKnown RBP5.91□□□□□ -1.46
ITGB1-217ENST00000494395 IFITM2Q01629 132 aa5.91□□□□□ -1.46
ITGB1-217ENST00000494395 FAM74A3Q4VXF1 159 aa5.91□□□□□ -1.46
ITGB1-217ENST00000494395 RPL36ALQ969Q0 106 aaKnown RBP5.91□□□□□ -1.46
ITGB1-217ENST00000494395 ISOC2Q96AB3 205 aa5.91□□□□□ -1.46
ITGB1-217ENST00000494395 OSTCQ9NRP0 149 aa5.91□□□□□ -1.46
ITGB1-217ENST00000494395 TNFRSF18Q9Y5U5 241 aa5.91□□□□□ -1.46
ITGB1-217ENST00000494395 DNAH11Q96DT5 4516 aa5.9□□□□□ -1.46
ITGB1-217ENST00000494395 TRAV8-6A0A0B4J262 113 aa5.9□□□□□ -1.46
ITGB1-217ENST00000494395 A8MWL6 223 aa5.9□□□□□ -1.46
ITGB1-217ENST00000494395 M0QY20 66 aa5.9□□□□□ -1.46
ITGB1-217ENST00000494395 TRGC1P0CF51 173 aa5.9□□□□□ -1.46
ITGB1-217ENST00000494395 PEA15Q15121 130 aa5.9□□□□□ -1.46
ITGB1-217ENST00000494395 TMEM241Q24JQ0 296 aa5.9□□□□□ -1.46
ITGB1-217ENST00000494395 OR10J3Q5JRS4 329 aa5.9□□□□□ -1.46
ITGB1-217ENST00000494395 DPH3P1Q9H4G8 78 aa5.9□□□□□ -1.46
ITGB1-217ENST00000494395 V9GYV3 84 aa5.9□□□□□ -1.46
ITGB1-217ENST00000494395 A0A087WWC5 75 aa5.89□□□□□ -1.47
ITGB1-217ENST00000494395 FAM231BA6NCW3 169 aa5.89□□□□□ -1.47
ITGB1-217ENST00000494395 IBA57-AS1B1ANH7 110 aa5.89□□□□□ -1.47
ITGB1-217ENST00000494395 SMIM17P0DL12 118 aa5.89□□□□□ -1.47
ITGB1-217ENST00000494395 ERVFC1-1P60608 527 aa5.89□□□□□ -1.47
ITGB1-217ENST00000494395 SUMO4Q6EEV6 95 aa5.89□□□□□ -1.47
ITGB1-217ENST00000494395 C10orf126Q8N4M7 172 aa5.89□□□□□ -1.47
ITGB1-217ENST00000494395 TSKUQ8WUA8 353 aa5.89□□□□□ -1.47
ITGB1-217ENST00000494395 GFRA4Q9GZZ7 299 aa5.89□□□□□ -1.47
ITGB1-217ENST00000494395 NAT8Q9UHE5 227 aa5.89□□□□□ -1.47
ITGB1-217ENST00000494395 TRAV9-2A0A087WT02 112 aa5.88□□□□□ -1.47
ITGB1-217ENST00000494395 HIGD1CA8MV81 97 aa5.88□□□□□ -1.47
ITGB1-217ENST00000494395 MGPP08493 103 aa5.88□□□□□ -1.47
ITGB1-217ENST00000494395 CLLU1Q5K131 121 aa5.88□□□□□ -1.47
ITGB1-217ENST00000494395 NTM-AS1Q6ZSK4 140 aa5.88□□□□□ -1.47
ITGB1-217ENST00000494395 NIT1Q86X76 327 aa5.88□□□□□ -1.47
ITGB1-217ENST00000494395 PGLYRP4Q96LB8 373 aa5.88□□□□□ -1.47
ITGB1-217ENST00000494395 TRBV6-8A0A0A6YYG3 113 aa5.87□□□□□ -1.47
ITGB1-217ENST00000494395 IGHV3-30P01768 117 aa5.87□□□□□ -1.47
ITGB1-217ENST00000494395 IGHV3-33P01772 117 aa5.87□□□□□ -1.47
ITGB1-217ENST00000494395 IGHV3-30-3P0DP02 117 aa5.87□□□□□ -1.47
ITGB1-217ENST00000494395 IGHV3-30-5P0DP03 117 aa5.87□□□□□ -1.47
ITGB1-217ENST00000494395 SUMO2P61956 95 aaKnown RBP5.87□□□□□ -1.47
ITGB1-217ENST00000494395 LAGE3Q14657 143 aa5.87□□□□□ -1.47
ITGB1-217ENST00000494395 TWIST1Q15672 202 aa5.87□□□□□ -1.47
ITGB1-217ENST00000494395 ADIRFQ15847 76 aa5.87□□□□□ -1.47
ITGB1-217ENST00000494395 RASL11AQ6T310 242 aa5.87□□□□□ -1.47
ITGB1-217ENST00000494395 DAZ4Q86SG3 579 aaKnown RBP5.87□□□□□ -1.47
ITGB1-217ENST00000494395 NFE4Q86UQ8 179 aa5.87□□□□□ -1.47
ITGB1-217ENST00000494395 GATD1Q8NB37 220 aa5.87□□□□□ -1.47
ITGB1-217ENST00000494395 DNAJC30Q96LL9 226 aa5.87□□□□□ -1.47
ITGB1-217ENST00000494395 KRTAP9-2Q9BYQ4 174 aa5.87□□□□□ -1.47
ITGB1-217ENST00000494395 DAZ3Q9NR90 486 aaKnown RBP5.87□□□□□ -1.47
ITGB1-217ENST00000494395 DYNC1H1Q14204 4646 aaKnown RBP5.87□□□□□ -1.47
ITGB1-217ENST00000494395 H7C1H1 209 aa5.86□□□□□ -1.47
ITGB1-217ENST00000494395 C15orf54Q8N8G6 183 aa5.86□□□□□ -1.47
ITGB1-217ENST00000494395 NUP35Q8NFH5 326 aa5.86□□□□□ -1.47
ITGB1-217ENST00000494395 CHCHD7Q9BUK0 85 aa5.86□□□□□ -1.47
ITGB1-217ENST00000494395 NIT2Q9NQR4 276 aa5.86□□□□□ -1.47
ITGB1-217ENST00000494395 TRAV26-2A0A0B4J265 109 aa5.85□□□□□ -1.47
ITGB1-217ENST00000494395 A0A1B0GUT8 65 aa5.85□□□□□ -1.47
ITGB1-217ENST00000494395 SMIM27A0A1W2PRY6 76 aa5.85□□□□□ -1.47
ITGB1-217ENST00000494395 KRTAP10-2P60368 255 aa5.85□□□□□ -1.47
ITGB1-217ENST00000494395 RAB14P61106 215 aa5.85□□□□□ -1.47
ITGB1-217ENST00000494395 IQCJQ1A5X6 159 aa5.85□□□□□ -1.47
ITGB1-217ENST00000494395 RNF185Q96GF1 192 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms