RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 C11orf52Q96A22 123 aa5.64□□□□□ -1.51
LRCH3-219ENST00000494069 KRTAP9-9Q9BYP9 154 aa5.64□□□□□ -1.51
LRCH3-219ENST00000494069 KRTAP9-4Q9BYQ2 154 aa5.64□□□□□ -1.51
LRCH3-219ENST00000494069 KIF25-AS1Q9Y6Z4 181 aa5.64□□□□□ -1.51
LRCH3-219ENST00000494069 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.63□□□□□ -1.51
LRCH3-219ENST00000494069 TRAV8-3A0A0A6YYJ7 113 aa5.63□□□□□ -1.51
LRCH3-219ENST00000494069 TRAV1-1A0A0B4J248 108 aa5.63□□□□□ -1.51
LRCH3-219ENST00000494069 OR5AL1P0C617 328 aa5.63□□□□□ -1.51
LRCH3-219ENST00000494069 SULT1A2P50226 295 aa5.63□□□□□ -1.51
LRCH3-219ENST00000494069 RAB4BP61018 213 aa5.63□□□□□ -1.51
LRCH3-219ENST00000494069 LINC01620Q4KN68 170 aa5.63□□□□□ -1.51
LRCH3-219ENST00000494069 Q5VSD8 79 aa5.63□□□□□ -1.51
LRCH3-219ENST00000494069 SPANXN1Q5VSR9 72 aa5.63□□□□□ -1.51
LRCH3-219ENST00000494069 OR10G8Q8NGN5 311 aa5.63□□□□□ -1.51
LRCH3-219ENST00000494069 NTN5Q8WTR8 489 aaPredicted RBP5.63□□□□□ -1.51
LRCH3-219ENST00000494069 TPPP3Q9BW30 176 aa5.63□□□□□ -1.51
LRCH3-219ENST00000494069 TM2D2Q9BX73 214 aa5.63□□□□□ -1.51
LRCH3-219ENST00000494069 MANBALQ9NQG1 85 aa5.63□□□□□ -1.51
LRCH3-219ENST00000494069 TRBV20OR9-2A0A075B6H5 130 aa5.62□□□□□ -1.51
LRCH3-219ENST00000494069 IGKV2D-24A0A075B6R9 120 aa5.62□□□□□ -1.51
LRCH3-219ENST00000494069 C19orf71A6NCJ1 209 aa5.62□□□□□ -1.51
LRCH3-219ENST00000494069 TMEM262E9PQX1 116 aa5.62□□□□□ -1.51
LRCH3-219ENST00000494069 F5H697 171 aa5.62□□□□□ -1.51
LRCH3-219ENST00000494069 C1QBP02746 253 aa5.62□□□□□ -1.51
LRCH3-219ENST00000494069 RAB5CP51148 216 aa5.62□□□□□ -1.51
LRCH3-219ENST00000494069 TCTE3Q8IZS6 198 aa5.62□□□□□ -1.51
LRCH3-219ENST00000494069 OR2D3Q8NGH3 330 aa5.62□□□□□ -1.51
LRCH3-219ENST00000494069 UBE2WQ96B02 151 aa5.62□□□□□ -1.51
LRCH3-219ENST00000494069 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.62□□□□□ -1.51
LRCH3-219ENST00000494069 URGCP-MRPS24S4R325 110 aa5.62□□□□□ -1.51
LRCH3-219ENST00000494069 A0A087WX48 190 aa5.61□□□□□ -1.51
LRCH3-219ENST00000494069 TRBV6-8A0A0A6YYG3 113 aa5.61□□□□□ -1.51
LRCH3-219ENST00000494069 IGLC6P0CF74 106 aa5.61□□□□□ -1.51
LRCH3-219ENST00000494069 INAFM2P0DMQ5 153 aa5.61□□□□□ -1.51
LRCH3-219ENST00000494069 MPV17L2Q567V2 206 aa5.61□□□□□ -1.51
LRCH3-219ENST00000494069 TOR2AQ5JU69 321 aa5.61□□□□□ -1.51
LRCH3-219ENST00000494069 ENHOQ6UWT2 76 aa5.61□□□□□ -1.51
LRCH3-219ENST00000494069 Q6ZNX1 250 aa5.61□□□□□ -1.51
LRCH3-219ENST00000494069 NTM-AS1Q6ZSK4 140 aa5.61□□□□□ -1.51
LRCH3-219ENST00000494069 FRZBQ92765 325 aa5.61□□□□□ -1.51
LRCH3-219ENST00000494069 TMEM70Q9BUB7 260 aa5.61□□□□□ -1.51
LRCH3-219ENST00000494069 BCL2P10415 239 aa5.6□□□□□ -1.51
LRCH3-219ENST00000494069 GNG4P50150 75 aa5.6□□□□□ -1.51
LRCH3-219ENST00000494069 MEF2BQ02080 365 aaPredicted RBP5.6□□□□□ -1.51
LRCH3-219ENST00000494069 EIF5AL1Q6IS14 154 aaKnown RBP5.6□□□□□ -1.51
LRCH3-219ENST00000494069 SLC51BQ86UW2 128 aa5.6□□□□□ -1.51
LRCH3-219ENST00000494069 C15orf54Q8N8G6 183 aa5.6□□□□□ -1.51
LRCH3-219ENST00000494069 Q8N976 141 aa5.6□□□□□ -1.51
LRCH3-219ENST00000494069 FER1L6-AS1Q8NA97 138 aa5.6□□□□□ -1.51
LRCH3-219ENST00000494069 DEFB104AQ8WTQ1 72 aa5.6□□□□□ -1.51
LRCH3-219ENST00000494069 DAZAP1Q96EP5 407 aaKnown RBP5.6□□□□□ -1.51
LRCH3-219ENST00000494069 MED9Q9NWA0 146 aa5.6□□□□□ -1.51
LRCH3-219ENST00000494069 SRRM2Q9UQ35 2752 aaKnown RBP5.59□□□□□ -1.51
LRCH3-219ENST00000494069 H3BS24 57 aa5.59□□□□□ -1.51
LRCH3-219ENST00000494069 M0QY20 66 aa5.59□□□□□ -1.51
LRCH3-219ENST00000494069 MGPP08493 103 aa5.59□□□□□ -1.51
LRCH3-219ENST00000494069 GAGE6Q13070 117 aa5.59□□□□□ -1.51
LRCH3-219ENST00000494069 SUMO4Q6EEV6 95 aa5.59□□□□□ -1.51
LRCH3-219ENST00000494069 ATRAIDQ6UW56 229 aa5.59□□□□□ -1.51
LRCH3-219ENST00000494069 Q6ZSA8 131 aa5.59□□□□□ -1.51
LRCH3-219ENST00000494069 C9orf62Q8N4C0 152 aa5.59□□□□□ -1.51
LRCH3-219ENST00000494069 AP1S3Q96PC3 154 aa5.59□□□□□ -1.51
LRCH3-219ENST00000494069 CHCHD5Q9BSY4 110 aa5.59□□□□□ -1.51
LRCH3-219ENST00000494069 AP5S1Q9NUS5 200 aa5.59□□□□□ -1.51
LRCH3-219ENST00000494069 VAX2Q9UIW0 290 aa5.59□□□□□ -1.51
LRCH3-219ENST00000494069 FLG2Q5D862 2391 aaPredicted RBP5.58□□□□□ -1.52
LRCH3-219ENST00000494069 TEX46H3BTG2 121 aa5.58□□□□□ -1.52
LRCH3-219ENST00000494069 K7EN84 100 aa5.58□□□□□ -1.52
LRCH3-219ENST00000494069 PDE6DO43924 150 aa5.58□□□□□ -1.52
LRCH3-219ENST00000494069 IFNA1P01562 189 aa5.58□□□□□ -1.52
LRCH3-219ENST00000494069 P01737 135 aa5.58□□□□□ -1.52
LRCH3-219ENST00000494069 ANGP03950 147 aaKnown RBP5.58□□□□□ -1.52
LRCH3-219ENST00000494069 SMIM17P0DL12 118 aa5.58□□□□□ -1.52
LRCH3-219ENST00000494069 RPS20P60866 119 aaKnown RBP5.58□□□□□ -1.52
LRCH3-219ENST00000494069 ELOBQ15370 118 aa5.58□□□□□ -1.52
LRCH3-219ENST00000494069 KCNIP4Q6PIL6 250 aa5.58□□□□□ -1.52
LRCH3-219ENST00000494069 CLPSL2Q6UWE3 100 aa5.58□□□□□ -1.52
LRCH3-219ENST00000494069 LYZL1Q6UWQ5 148 aa5.58□□□□□ -1.52
LRCH3-219ENST00000494069 NUDT10Q8NFP7 164 aa5.58□□□□□ -1.52
LRCH3-219ENST00000494069 RMI2Q96E14 147 aa5.58□□□□□ -1.52
LRCH3-219ENST00000494069 NUDT11Q96G61 164 aa5.58□□□□□ -1.52
LRCH3-219ENST00000494069 CHCHD7Q9BUK0 85 aa5.58□□□□□ -1.52
LRCH3-219ENST00000494069 RNASE7Q9H1E1 156 aaKnown RBP5.58□□□□□ -1.52
LRCH3-219ENST00000494069 COX11Q9Y6N1 276 aa5.58□□□□□ -1.52
LRCH3-219ENST00000494069 NTF3P20783 257 aa5.57□□□□□ -1.52
LRCH3-219ENST00000494069 NKX2-5P52952 324 aaPredicted RBP5.57□□□□□ -1.52
LRCH3-219ENST00000494069 RBX1P62877 108 aa5.57□□□□□ -1.52
LRCH3-219ENST00000494069 CACNG7P62955 275 aa5.57□□□□□ -1.52
LRCH3-219ENST00000494069 ALKAL2Q6UX46 152 aa5.57□□□□□ -1.52
LRCH3-219ENST00000494069 OCC1Q8TAD7 63 aa5.57□□□□□ -1.52
LRCH3-219ENST00000494069 FOXA3P55318 350 aaPredicted RBP5.56□□□□□ -1.52
LRCH3-219ENST00000494069 Q0VG73 95 aa5.56□□□□□ -1.52
LRCH3-219ENST00000494069 KRTAP26-1Q6PEX3 210 aa5.56□□□□□ -1.52
LRCH3-219ENST00000494069 AKAP14Q86UN6 197 aa5.56□□□□□ -1.52
LRCH3-219ENST00000494069 LINC00269Q8N2A0 174 aa5.56□□□□□ -1.52
LRCH3-219ENST00000494069 SMIM12Q96EX1 92 aa5.56□□□□□ -1.52
LRCH3-219ENST00000494069 C1orf43Q9BWL3 253 aa5.56□□□□□ -1.52
LRCH3-219ENST00000494069 FAT3Q8TDW7 4589 aa5.55□□□□□ -1.52
LRCH3-219ENST00000494069 IGLV4-60A0A075B6I1 120 aa5.55□□□□□ -1.52
LRCH3-219ENST00000494069 TRBV25-1A0A075B6N4 114 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms