RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 MDFICQ9P1T7 246 aa8.6□□□□□ -1.03
RFC4-214ENST00000494047 INAFM1C9JVW0 142 aa8.59□□□□□ -1.03
RFC4-214ENST00000494047 K7EQG2 157 aa8.59□□□□□ -1.03
RFC4-214ENST00000494047 IGHV3-11P01762 117 aa8.59□□□□□ -1.03
RFC4-214ENST00000494047 PRB4P10163 310 aaPredicted RBP8.59□□□□□ -1.03
RFC4-214ENST00000494047 UBE2D1P51668 147 aa8.59□□□□□ -1.03
RFC4-214ENST00000494047 TCTAP57738 103 aa8.59□□□□□ -1.03
RFC4-214ENST00000494047 LINC00315P59091 139 aa8.59□□□□□ -1.03
RFC4-214ENST00000494047 ZNF876PQ49A33 203 aa8.59□□□□□ -1.03
RFC4-214ENST00000494047 LCNL1Q6ZST4 164 aa8.59□□□□□ -1.03
RFC4-214ENST00000494047 PLEKHB2Q96CS7 222 aa8.59□□□□□ -1.03
RFC4-214ENST00000494047 UBE2E2Q96LR5 201 aa8.59□□□□□ -1.03
RFC4-214ENST00000494047 IGHV3-16A0A0C4DH30 117 aa8.58□□□□□ -1.04
RFC4-214ENST00000494047 F5H697 171 aa8.58□□□□□ -1.04
RFC4-214ENST00000494047 I3L3M4 83 aa8.58□□□□□ -1.04
RFC4-214ENST00000494047 M0QXV9 152 aa8.58□□□□□ -1.04
RFC4-214ENST00000494047 IGHV4-31P0DP07 118 aa8.58□□□□□ -1.04
RFC4-214ENST00000494047 LGALS3P17931 250 aaKnown RBP8.58□□□□□ -1.04
RFC4-214ENST00000494047 KLK15Q9H2R5 256 aa8.58□□□□□ -1.04
RFC4-214ENST00000494047 MRPL16Q9NX20 251 aaKnown RBP8.58□□□□□ -1.04
RFC4-214ENST00000494047 LINC00527Q9UJ94 153 aa8.58□□□□□ -1.04
RFC4-214ENST00000494047 PYGO1Q9Y3Y4 419 aa8.58□□□□□ -1.04
RFC4-214ENST00000494047 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.57□□□□□ -1.04
RFC4-214ENST00000494047 TMEM238C9JI98 176 aa8.57□□□□□ -1.04
RFC4-214ENST00000494047 H3BMG7 143 aa8.57□□□□□ -1.04
RFC4-214ENST00000494047 J3KRW8 73 aa8.57□□□□□ -1.04
RFC4-214ENST00000494047 RHODO00212 210 aa8.57□□□□□ -1.04
RFC4-214ENST00000494047 GNRH2O43555 120 aa8.57□□□□□ -1.04
RFC4-214ENST00000494047 RPL24P83731 157 aaKnown RBP8.57□□□□□ -1.04
RFC4-214ENST00000494047 ZNF56Q15929 161 aa8.57□□□□□ -1.04
RFC4-214ENST00000494047 MAPKAPK5-AS1Q8N8E1 139 aa8.57□□□□□ -1.04
RFC4-214ENST00000494047 LINC00467Q9BRT7 94 aa8.57□□□□□ -1.04
RFC4-214ENST00000494047 VPREB3Q9UKI3 123 aa8.57□□□□□ -1.04
RFC4-214ENST00000494047 IGLV4-69A0A075B6H9 119 aa8.56□□□□□ -1.04
RFC4-214ENST00000494047 IGHV3OR16-10A0A075B7F0 116 aa8.56□□□□□ -1.04
RFC4-214ENST00000494047 A8MTW9 85 aa8.56□□□□□ -1.04
RFC4-214ENST00000494047 A8MWV9 139 aa8.56□□□□□ -1.04
RFC4-214ENST00000494047 SMAGPQ0VAQ4 97 aa8.56□□□□□ -1.04
RFC4-214ENST00000494047 PEMTQ9UBM1 199 aa8.56□□□□□ -1.04
RFC4-214ENST00000494047 M0QY20 66 aa8.55□□□□□ -1.04
RFC4-214ENST00000494047 LEPROTO15243 131 aa8.55□□□□□ -1.04
RFC4-214ENST00000494047 TGFAP01135 160 aa8.55□□□□□ -1.04
RFC4-214ENST00000494047 BLCAPP62952 87 aa8.55□□□□□ -1.04
RFC4-214ENST00000494047 C21orf62-AS1Q17RA5 79 aa8.55□□□□□ -1.04
RFC4-214ENST00000494047 CD300EQ496F6 205 aaPredicted RBP8.55□□□□□ -1.04
RFC4-214ENST00000494047 SLC25A29Q8N8R3 303 aa8.55□□□□□ -1.04
RFC4-214ENST00000494047 WFDC12Q8WWY7 111 aa8.55□□□□□ -1.04
RFC4-214ENST00000494047 DNAJC30Q96LL9 226 aa8.55□□□□□ -1.04
RFC4-214ENST00000494047 PGPEP1Q9NXJ5 209 aa8.55□□□□□ -1.04
RFC4-214ENST00000494047 TRAV12-3A0A0B4J271 114 aa8.54□□□□□ -1.04
RFC4-214ENST00000494047 A0A0J9YY99 117 aa8.54□□□□□ -1.04
RFC4-214ENST00000494047 K7ERJ3 54 aa8.54□□□□□ -1.04
RFC4-214ENST00000494047 SAP30O75446 220 aa8.54□□□□□ -1.04
RFC4-214ENST00000494047 CRYGDP07320 174 aa8.54□□□□□ -1.04
RFC4-214ENST00000494047 MTURNQ8N3F0 131 aa8.54□□□□□ -1.04
RFC4-214ENST00000494047 C20orf203Q8NBC4 194 aa8.54□□□□□ -1.04
RFC4-214ENST00000494047 CLUHP3Q96NS8 147 aa8.54□□□□□ -1.04
RFC4-214ENST00000494047 SIGMAR1Q99720 223 aa8.54□□□□□ -1.04
RFC4-214ENST00000494047 SPATA25Q9BR10 227 aa8.54□□□□□ -1.04
RFC4-214ENST00000494047 TTTY13Q9BZ97 58 aa8.54□□□□□ -1.04
RFC4-214ENST00000494047 A0A0B4J2C4 111 aa8.53□□□□□ -1.04
RFC4-214ENST00000494047 TEX48A0A1B0GUV7 120 aa8.53□□□□□ -1.04
RFC4-214ENST00000494047 F6UB75 175 aa8.53□□□□□ -1.04
RFC4-214ENST00000494047 J3QQQ9 107 aa8.53□□□□□ -1.04
RFC4-214ENST00000494047 UBE2D3P61077 147 aa8.53□□□□□ -1.04
RFC4-214ENST00000494047 UBE2D2P62837 147 aa8.53□□□□□ -1.04
RFC4-214ENST00000494047 ZNF415Q09FC8 603 aa8.53□□□□□ -1.04
RFC4-214ENST00000494047 TMEM170BQ5T4T1 132 aa8.53□□□□□ -1.04
RFC4-214ENST00000494047 COPS9Q8WXC6 57 aa8.53□□□□□ -1.04
RFC4-214ENST00000494047 SPAG8Q99932 426 aaPredicted RBP8.53□□□□□ -1.04
RFC4-214ENST00000494047 SPXQ9BT56 116 aa8.53□□□□□ -1.04
RFC4-214ENST00000494047 SPANXA1Q9NS26 97 aa8.53□□□□□ -1.04
RFC4-214ENST00000494047 ANK3Q12955 4377 aaKnown RBP8.53□□□□□ -1.04
RFC4-214ENST00000494047 ZNF688P0C7X2 276 aa8.52□□□□□ -1.05
RFC4-214ENST00000494047 Q8N1Y9 231 aa8.52□□□□□ -1.05
RFC4-214ENST00000494047 C10orf126Q8N4M7 172 aa8.52□□□□□ -1.05
RFC4-214ENST00000494047 RNF183Q96D59 192 aa8.52□□□□□ -1.05
RFC4-214ENST00000494047 NAA38Q9BRA0 125 aaKnown RBP8.52□□□□□ -1.05
RFC4-214ENST00000494047 C1QTNF4Q9BXJ3 329 aa8.52□□□□□ -1.05
RFC4-214ENST00000494047 APOMO95445 188 aa8.51□□□□□ -1.05
RFC4-214ENST00000494047 SRD5A1P18405 259 aa8.51□□□□□ -1.05
RFC4-214ENST00000494047 FAM74A4Q5TZK3 123 aa8.51□□□□□ -1.05
RFC4-214ENST00000494047 MORN3Q6PF18 240 aaPredicted RBP8.51□□□□□ -1.05
RFC4-214ENST00000494047 Q6ZQT7 251 aa8.51□□□□□ -1.05
RFC4-214ENST00000494047 NDUFA11Q86Y39 141 aa8.51□□□□□ -1.05
RFC4-214ENST00000494047 IGKV3-7A0A075B6H7 116 aa8.5□□□□□ -1.05
RFC4-214ENST00000494047 TMEM223A0PJW6 202 aa8.5□□□□□ -1.05
RFC4-214ENST00000494047 TMEM262E9PQX1 116 aa8.5□□□□□ -1.05
RFC4-214ENST00000494047 M0R2P5 195 aa8.5□□□□□ -1.05
RFC4-214ENST00000494047 TSHBP01222 138 aa8.5□□□□□ -1.05
RFC4-214ENST00000494047 IGHV3-30P01768 117 aa8.5□□□□□ -1.05
RFC4-214ENST00000494047 IGHV3-30-5P0DP03 117 aa8.5□□□□□ -1.05
RFC4-214ENST00000494047 DEFB112Q30KQ8 113 aa8.5□□□□□ -1.05
RFC4-214ENST00000494047 CFAP126Q5VTH2 177 aa8.5□□□□□ -1.05
RFC4-214ENST00000494047 PRIMA1Q86XR5 153 aa8.5□□□□□ -1.05
RFC4-214ENST00000494047 TMEM86BQ8N661 226 aa8.5□□□□□ -1.05
RFC4-214ENST00000494047 PRO1854Q9UHT4 67 aa8.5□□□□□ -1.05
RFC4-214ENST00000494047 ATRQ13535 2644 aa8.5□□□□□ -1.05
RFC4-214ENST00000494047 AGRNO00468 2067 aa8.5□□□□□ -1.05
RFC4-214ENST00000494047 A0A087WWL8 130 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms