RNA–Protein interactions for RNA: ENST00000492466.2

SS18L1-205, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18L1, Length 899 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-205ENST00000492466 URGCP-MRPS24S4R325 110 aa9.98□□□□□ -0.81
SS18L1-205ENST00000492466 TRBV7-3A0A075B6L6 115 aa9.97□□□□□ -0.81
SS18L1-205ENST00000492466 IGHV3-30P01768 117 aa9.97□□□□□ -0.81
SS18L1-205ENST00000492466 IGHV3-33P01772 117 aa9.97□□□□□ -0.81
SS18L1-205ENST00000492466 DNAH10OSP0CZ25 163 aa9.97□□□□□ -0.81
SS18L1-205ENST00000492466 LINC00694P0DN24 101 aa9.97□□□□□ -0.81
SS18L1-205ENST00000492466 IGHV3-30-3P0DP02 117 aa9.97□□□□□ -0.81
SS18L1-205ENST00000492466 IGHV3-30-5P0DP03 117 aa9.97□□□□□ -0.81
SS18L1-205ENST00000492466 BTF3P20290 206 aaKnown RBP9.97□□□□□ -0.81
SS18L1-205ENST00000492466 NTF3P20783 257 aa9.97□□□□□ -0.81
SS18L1-205ENST00000492466 KCNIP4Q6PIL6 250 aa9.97□□□□□ -0.81
SS18L1-205ENST00000492466 Q6ZRN7 208 aaPredicted RBP9.97□□□□□ -0.81
SS18L1-205ENST00000492466 PGLYRP4Q96LB8 373 aa9.97□□□□□ -0.81
SS18L1-205ENST00000492466 DPH3P1Q9H4G8 78 aa9.97□□□□□ -0.81
SS18L1-205ENST00000492466 SMDT1Q9H4I9 107 aa9.97□□□□□ -0.81
SS18L1-205ENST00000492466 MSRB1Q9NZV6 116 aa9.97□□□□□ -0.81
SS18L1-205ENST00000492466 NAT8Q9UHE5 227 aa9.97□□□□□ -0.81
SS18L1-205ENST00000492466 CT83Q5H943 113 aa9.96□□□□□ -0.82
SS18L1-205ENST00000492466 NFE4Q86UQ8 179 aa9.96□□□□□ -0.82
SS18L1-205ENST00000492466 Q8N1X5 172 aa9.96□□□□□ -0.82
SS18L1-205ENST00000492466 NEXN-AS1Q8NBZ9 246 aa9.96□□□□□ -0.82
SS18L1-205ENST00000492466 Q9UF83 564 aa9.96□□□□□ -0.82
SS18L1-205ENST00000492466 K7EP13 123 aa9.95□□□□□ -0.82
SS18L1-205ENST00000492466 SRSF3P84103 164 aaKnown RBP9.95□□□□□ -0.82
SS18L1-205ENST00000492466 OSTCQ9NRP0 149 aa9.95□□□□□ -0.82
SS18L1-205ENST00000492466 TNFRSF18Q9Y5U5 241 aa9.95□□□□□ -0.82
SS18L1-205ENST00000492466 UBE2D3P61077 147 aa9.94□□□□□ -0.82
SS18L1-205ENST00000492466 RPL23P62829 140 aaKnown RBP9.94□□□□□ -0.82
SS18L1-205ENST00000492466 UBE2D2P62837 147 aa9.94□□□□□ -0.82
SS18L1-205ENST00000492466 LINC01556Q5JQF7 62 aa9.94□□□□□ -0.82
SS18L1-205ENST00000492466 SUMO4Q6EEV6 95 aa9.94□□□□□ -0.82
SS18L1-205ENST00000492466 WDR73Q6P4I2 378 aa9.94□□□□□ -0.82
SS18L1-205ENST00000492466 GTSF1Q8WW33 167 aa9.94□□□□□ -0.82
SS18L1-205ENST00000492466 ISOC2Q96AB3 205 aa9.94□□□□□ -0.82
SS18L1-205ENST00000492466 Q9HAA7 133 aa9.94□□□□□ -0.82
SS18L1-205ENST00000492466 HIGD1CA8MV81 97 aa9.93□□□□□ -0.82
SS18L1-205ENST00000492466 C9JQL5 133 aa9.93□□□□□ -0.82
SS18L1-205ENST00000492466 PSCAO43653 123 aa9.93□□□□□ -0.82
SS18L1-205ENST00000492466 OR10G8Q8NGN5 311 aa9.93□□□□□ -0.82
SS18L1-205ENST00000492466 TSKUQ8WUA8 353 aa9.93□□□□□ -0.82
SS18L1-205ENST00000492466 KIF25-AS1Q9Y6Z4 181 aa9.93□□□□□ -0.82
SS18L1-205ENST00000492466 A0A087WX48 190 aa9.92□□□□□ -0.82
SS18L1-205ENST00000492466 EREGO14944 169 aa9.92□□□□□ -0.82
SS18L1-205ENST00000492466 RASL11AQ6T310 242 aa9.92□□□□□ -0.82
SS18L1-205ENST00000492466 CNFNQ9BYD5 112 aa9.92□□□□□ -0.82
SS18L1-205ENST00000492466 GFRA4Q9GZZ7 299 aa9.92□□□□□ -0.82
SS18L1-205ENST00000492466 A0A1B0GUT8 65 aa9.91□□□□□ -0.82
SS18L1-205ENST00000492466 TMEM97Q5BJF2 176 aa9.91□□□□□ -0.82
SS18L1-205ENST00000492466 DAZ4Q86SG3 579 aaKnown RBP9.91□□□□□ -0.82
SS18L1-205ENST00000492466 DNAJC30Q96LL9 226 aa9.91□□□□□ -0.82
SS18L1-205ENST00000492466 CHCHD5Q9BSY4 110 aa9.91□□□□□ -0.82
SS18L1-205ENST00000492466 DAZ3Q9NR90 486 aaKnown RBP9.91□□□□□ -0.82
SS18L1-205ENST00000492466 MYCBP2O75592 4640 aa9.91□□□□□ -0.82
SS18L1-205ENST00000492466 VPS13BQ7Z7G8 4022 aa9.91□□□□□ -0.82
SS18L1-205ENST00000492466 TMEM262E9PQX1 116 aa9.9□□□□□ -0.82
SS18L1-205ENST00000492466 CLLU1Q5K131 121 aa9.9□□□□□ -0.82
SS18L1-205ENST00000492466 V9GYV3 84 aa9.9□□□□□ -0.82
SS18L1-205ENST00000492466 TRBV6-8A0A0A6YYG3 113 aa9.89□□□□□ -0.83
SS18L1-205ENST00000492466 FAM231BA6NCW3 169 aa9.89□□□□□ -0.83
SS18L1-205ENST00000492466 M0QY20 66 aa9.89□□□□□ -0.83
SS18L1-205ENST00000492466 PKIAP61925 76 aa9.89□□□□□ -0.83
SS18L1-205ENST00000492466 RIGQ13278 110 aa9.89□□□□□ -0.83
SS18L1-205ENST00000492466 NAT8BQ9UHF3 227 aa9.89□□□□□ -0.83
SS18L1-205ENST00000492466 TRBV25-1A0A075B6N4 114 aa9.88□□□□□ -0.83
SS18L1-205ENST00000492466 TRAV26-2A0A0B4J265 109 aa9.88□□□□□ -0.83
SS18L1-205ENST00000492466 FUSP35637 526 aaKnown RBP eCLIP9.88□□□□□ -0.831e-6■□□□□ 8.3
SS18L1-205ENST00000492466 Q8N3U1 123 aa9.88□□□□□ -0.83
SS18L1-205ENST00000492466 NIT2Q9NQR4 276 aa9.88□□□□□ -0.83
SS18L1-205ENST00000492466 IBA57-AS1B1ANH7 110 aa9.87□□□□□ -0.83
SS18L1-205ENST00000492466 CRPP02741 224 aa9.87□□□□□ -0.83
SS18L1-205ENST00000492466 LAGE3Q14657 143 aa9.87□□□□□ -0.83
SS18L1-205ENST00000492466 ELOBQ15370 118 aa9.87□□□□□ -0.83
SS18L1-205ENST00000492466 NIT1Q86X76 327 aa9.87□□□□□ -0.83
SS18L1-205ENST00000492466 DNAH8Q96JB1 4490 aa9.86□□□□□ -0.83
SS18L1-205ENST00000492466 TRAV8-3A0A0A6YYJ7 113 aa9.86□□□□□ -0.83
SS18L1-205ENST00000492466 IGHV1-24A0A0C4DH33 117 aa9.86□□□□□ -0.83
SS18L1-205ENST00000492466 NUP35Q8NFH5 326 aa9.86□□□□□ -0.83
SS18L1-205ENST00000492466 RMI2Q96E14 147 aa9.86□□□□□ -0.83
SS18L1-205ENST00000492466 CHCHD7Q9BUK0 85 aa9.86□□□□□ -0.83
SS18L1-205ENST00000492466 PGPEP1Q9NXJ5 209 aa9.86□□□□□ -0.83
SS18L1-205ENST00000492466 UBE2L6O14933 153 aa9.85□□□□□ -0.83
SS18L1-205ENST00000492466 FOXA3P55318 350 aaPredicted RBP9.85□□□□□ -0.83
SS18L1-205ENST00000492466 XGP55808 180 aa9.85□□□□□ -0.83
SS18L1-205ENST00000492466 PNRC1Q12796 327 aaPredicted RBP9.85□□□□□ -0.83
SS18L1-205ENST00000492466 COTL1Q14019 142 aa9.85□□□□□ -0.83
SS18L1-205ENST00000492466 GATD1Q8NB37 220 aa9.85□□□□□ -0.83
SS18L1-205ENST00000492466 TM2D2Q9BX73 214 aa9.85□□□□□ -0.83
SS18L1-205ENST00000492466 KLK12Q9UKR0 248 aa9.85□□□□□ -0.83
SS18L1-205ENST00000492466 SRRM2Q9UQ35 2752 aaKnown RBP9.84□□□□□ -0.83
SS18L1-205ENST00000492466 PPP1R2P9O14990 202 aa9.84□□□□□ -0.83
SS18L1-205ENST00000492466 ANGP03950 147 aaKnown RBP9.84□□□□□ -0.83
SS18L1-205ENST00000492466 AMTP48728 403 aa9.84□□□□□ -0.83
SS18L1-205ENST00000492466 IFITM2Q01629 132 aa9.84□□□□□ -0.83
SS18L1-205ENST00000492466 GAGE6Q13070 117 aa9.84□□□□□ -0.83
SS18L1-205ENST00000492466 DEFB104AQ8WTQ1 72 aa9.84□□□□□ -0.83
SS18L1-205ENST00000492466 UBE2WQ96B02 151 aa9.84□□□□□ -0.83
SS18L1-205ENST00000492466 RPL39LQ96EH5 51 aaKnown RBP9.84□□□□□ -0.83
SS18L1-205ENST00000492466 TMEM243Q9BU79 118 aa9.84□□□□□ -0.83
SS18L1-205ENST00000492466 TMEM191AQ9H0A3 160 aa9.84□□□□□ -0.83
SS18L1-205ENST00000492466 S100A8P05109 93 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 129.8 ms