RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 TMEM2Q9UHN6 1383 aa0.21□□□□□ -2.38
HMGB1P30-201ENST00000492455 TMEM14DPA8MWL7 114 aa0.21□□□□□ -2.38
HMGB1P30-201ENST00000492455 NMBP08949 121 aa0.21□□□□□ -2.38
HMGB1P30-201ENST00000492455 SPINK8P0C7L1 97 aa0.21□□□□□ -2.38
HMGB1P30-201ENST00000492455 SMIM4Q8WVI0 70 aa0.21□□□□□ -2.38
HMGB1P30-201ENST00000492455 C10orf82Q8WW14 230 aa0.21□□□□□ -2.38
HMGB1P30-201ENST00000492455 PAIP2BQ9ULR5 123 aaKnown RBP0.21□□□□□ -2.38
HMGB1P30-201ENST00000492455 CDK13Q14004 1512 aaKnown RBP0.21□□□□□ -2.38
HMGB1P30-201ENST00000492455 ZNF142P52746 1687 aaPredicted RBP0.21□□□□□ -2.38
HMGB1P30-201ENST00000492455 MAP2P11137 1827 aaKnown RBP0.2□□□□□ -2.38
HMGB1P30-201ENST00000492455 TRAV22A0A0B4J277 110 aa0.2□□□□□ -2.38
HMGB1P30-201ENST00000492455 FAM25AB3EWG3 89 aa0.2□□□□□ -2.38
HMGB1P30-201ENST00000492455 FAM25CB3EWG5 89 aa0.2□□□□□ -2.38
HMGB1P30-201ENST00000492455 FAM25GB3EWG6 89 aa0.2□□□□□ -2.38
HMGB1P30-201ENST00000492455 SPTSSBQ8NFR3 76 aa0.2□□□□□ -2.38
HMGB1P30-201ENST00000492455 DPH3Q96FX2 82 aa0.2□□□□□ -2.38
HMGB1P30-201ENST00000492455 SEC11CQ9BY50 192 aa0.2□□□□□ -2.38
HMGB1P30-201ENST00000492455 TMEM191AQ9H0A3 160 aa0.2□□□□□ -2.38
HMGB1P30-201ENST00000492455 CCDC167Q9P0B6 97 aa0.2□□□□□ -2.38
HMGB1P30-201ENST00000492455 SPCS1Q9Y6A9 102 aa0.2□□□□□ -2.38
HMGB1P30-201ENST00000492455 R4GMQ9 66 aa0.2□□□□□ -2.38
HMGB1P30-201ENST00000492455 DMBT1Q9UGM3 2413 aaPredicted RBP0.2□□□□□ -2.38
HMGB1P30-201ENST00000492455 IGSF10Q6WRI0 2623 aa0.2□□□□□ -2.38
HMGB1P30-201ENST00000492455 VIRMAQ69YN4 1812 aaKnown RBP0.2□□□□□ -2.38
HMGB1P30-201ENST00000492455 MYH6P13533 1939 aa0.19□□□□□ -2.38
HMGB1P30-201ENST00000492455 CLPSL1A2RUU4 121 aa0.19□□□□□ -2.38
HMGB1P30-201ENST00000492455 NDUFB6O95139 128 aa0.19□□□□□ -2.38
HMGB1P30-201ENST00000492455 CBLN1P23435 193 aa0.19□□□□□ -2.38
HMGB1P30-201ENST00000492455 UBE2D1P51668 147 aa0.19□□□□□ -2.38
HMGB1P30-201ENST00000492455 EDDM3BP56851 147 aa0.19□□□□□ -2.38
HMGB1P30-201ENST00000492455 DCDP81605 110 aaKnown RBP0.19□□□□□ -2.38
HMGB1P30-201ENST00000492455 INSL4Q14641 139 aa0.19□□□□□ -2.38
HMGB1P30-201ENST00000492455 Q6ZRX8 168 aa0.19□□□□□ -2.38
HMGB1P30-201ENST00000492455 BAGE3Q86Y29 109 aa0.19□□□□□ -2.38
HMGB1P30-201ENST00000492455 KDM6BO15054 1643 aa0.19□□□□□ -2.38
HMGB1P30-201ENST00000492455 DAPK1P53355 1430 aa0.19□□□□□ -2.38
HMGB1P30-201ENST00000492455 IBTKQ9P2D0 1353 aaPredicted RBP0.19□□□□□ -2.38
HMGB1P30-201ENST00000492455 TRGV1A0A0A0MS02 117 aa0.18□□□□□ -2.38
HMGB1P30-201ENST00000492455 CTXND1A0A1B0GTU2 59 aa0.18□□□□□ -2.38
HMGB1P30-201ENST00000492455 M0R3E3 92 aa0.18□□□□□ -2.38
HMGB1P30-201ENST00000492455 APOC3P02656 99 aa0.18□□□□□ -2.38
HMGB1P30-201ENST00000492455 S100A12P80511 92 aa0.18□□□□□ -2.38
HMGB1P30-201ENST00000492455 COX17Q14061 63 aa0.18□□□□□ -2.38
HMGB1P30-201ENST00000492455 ZNF818PQ6ZRF7 136 aa0.18□□□□□ -2.38
HMGB1P30-201ENST00000492455 RERGLQ9H628 205 aa0.18□□□□□ -2.38
HMGB1P30-201ENST00000492455 PRO0255Q9UI72 69 aa0.18□□□□□ -2.38
HMGB1P30-201ENST00000492455 AKAP11Q9UKA4 1901 aa0.18□□□□□ -2.38
HMGB1P30-201ENST00000492455 PLXNA1Q9UIW2 1896 aa0.18□□□□□ -2.38
HMGB1P30-201ENST00000492455 ASXL3Q9C0F0 2248 aa0.17□□□□□ -2.38
HMGB1P30-201ENST00000492455 LRP1Q07954 4544 aaKnown RBP0.17□□□□□ -2.38
HMGB1P30-201ENST00000492455 FXYD6-FXYD2A0A087WZ82 144 aa0.17□□□□□ -2.38
HMGB1P30-201ENST00000492455 TRAV1-2A0A0B4J238 106 aa0.17□□□□□ -2.38
HMGB1P30-201ENST00000492455 TRBV10-3A0A0K0K1G6 114 aa0.17□□□□□ -2.38
HMGB1P30-201ENST00000492455 SSC5DA1L4H1 1573 aa0.17□□□□□ -2.38
HMGB1P30-201ENST00000492455 ZNF815PA8K554 130 aa0.17□□□□□ -2.38
HMGB1P30-201ENST00000492455 NDUFA2O43678 99 aa0.17□□□□□ -2.38
HMGB1P30-201ENST00000492455 PPP1R17O96001 155 aa0.17□□□□□ -2.38
HMGB1P30-201ENST00000492455 S100A7L2Q5SY68 101 aa0.17□□□□□ -2.38
HMGB1P30-201ENST00000492455 C10orf128Q5T292 105 aa0.17□□□□□ -2.38
HMGB1P30-201ENST00000492455 CFAP126Q5VTH2 177 aa0.17□□□□□ -2.38
HMGB1P30-201ENST00000492455 C12orf73Q69YU5 71 aa0.17□□□□□ -2.38
HMGB1P30-201ENST00000492455 TSC22D3Q99576 134 aa0.17□□□□□ -2.38
HMGB1P30-201ENST00000492455 PDCD10Q9BUL8 212 aa0.17□□□□□ -2.38
HMGB1P30-201ENST00000492455 SPRR2GQ9BYE4 73 aa0.17□□□□□ -2.38
HMGB1P30-201ENST00000492455 SCN3BQ9NY72 215 aa0.17□□□□□ -2.38
HMGB1P30-201ENST00000492455 UNC79Q9P2D8 2635 aa0.17□□□□□ -2.38
HMGB1P30-201ENST00000492455 NSD1Q96L73 2696 aaPredicted RBP0.17□□□□□ -2.38
HMGB1P30-201ENST00000492455 MUC22E2RYF6 1773 aaPredicted RBP0.17□□□□□ -2.38
HMGB1P30-201ENST00000492455 LAMC3Q9Y6N6 1575 aa0.16□□□□□ -2.38
HMGB1P30-201ENST00000492455 NAIPQ13075 1403 aa0.16□□□□□ -2.38
HMGB1P30-201ENST00000492455 PHIPQ8WWQ0 1821 aa0.16□□□□□ -2.38
HMGB1P30-201ENST00000492455 TNFP01375 233 aa0.16□□□□□ -2.38
HMGB1P30-201ENST00000492455 IFNGP01579 166 aa0.16□□□□□ -2.38
HMGB1P30-201ENST00000492455 ARPC4P59998 168 aa0.16□□□□□ -2.38
HMGB1P30-201ENST00000492455 HAMPP81172 84 aa0.16□□□□□ -2.38
HMGB1P30-201ENST00000492455 PIGYQ3MUY2 71 aa0.16□□□□□ -2.38
HMGB1P30-201ENST00000492455 CCDC58Q4VC31 144 aa0.16□□□□□ -2.38
HMGB1P30-201ENST00000492455 TMEM170BQ5T4T1 132 aa0.16□□□□□ -2.38
HMGB1P30-201ENST00000492455 SSBP3-AS1Q7Z2R9 100 aa0.16□□□□□ -2.38
HMGB1P30-201ENST00000492455 Q8IZM0 81 aa0.16□□□□□ -2.38
HMGB1P30-201ENST00000492455 WFDC6Q9BQY6 131 aa0.16□□□□□ -2.38
HMGB1P30-201ENST00000492455 CNFNQ9BYD5 112 aa0.16□□□□□ -2.38
HMGB1P30-201ENST00000492455 FAIMQ9NVQ4 179 aa0.16□□□□□ -2.38
HMGB1P30-201ENST00000492455 PTPN13Q12923 2485 aa0.16□□□□□ -2.38
HMGB1P30-201ENST00000492455 TNS1Q9HBL0 1735 aaKnown RBP0.16□□□□□ -2.38
HMGB1P30-201ENST00000492455 CACNA1CQ13936 2221 aa0.15□□□□□ -2.38
HMGB1P30-201ENST00000492455 ZNF609O15014 1411 aa0.15□□□□□ -2.39
HMGB1P30-201ENST00000492455 NCOR2Q9Y618 2525 aa0.15□□□□□ -2.39
HMGB1P30-201ENST00000492455 LAMB1P07942 1786 aa0.15□□□□□ -2.39
HMGB1P30-201ENST00000492455 LOC285095A0A1B0GVY8 99 aa0.15□□□□□ -2.39
HMGB1P30-201ENST00000492455 LOC730098B7Z3J9 87 aa0.15□□□□□ -2.39
HMGB1P30-201ENST00000492455 HIST1H1DP16402 221 aaKnown RBP0.15□□□□□ -2.39
HMGB1P30-201ENST00000492455 TPPP2P59282 170 aa0.15□□□□□ -2.39
HMGB1P30-201ENST00000492455 SELENOWP63302 87 aa0.15□□□□□ -2.39
HMGB1P30-201ENST00000492455 CCL8P80075 99 aa0.15□□□□□ -2.39
HMGB1P30-201ENST00000492455 DEFB109BQ30KR1 87 aa0.15□□□□□ -2.39
HMGB1P30-201ENST00000492455 TTC9CQ8N5M4 171 aa0.15□□□□□ -2.39
HMGB1P30-201ENST00000492455 PPP3R2Q96LZ3 170 aa0.15□□□□□ -2.39
HMGB1P30-201ENST00000492455 CYP4F30PQ9H0H9 118 aa0.15□□□□□ -2.39
HMGB1P30-201ENST00000492455 OTOGQ6ZRI0 2925 aa0.15□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms