RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 PGPEP1Q9NXJ5 209 aa16.47■□□□□ 0.23
UPF3A-209ENST00000492270 F2Z2F3 143 aa16.46■□□□□ 0.23
UPF3A-209ENST00000492270 CTRLP40313 264 aa16.45■□□□□ 0.22
UPF3A-209ENST00000492270 DNAJC30Q96LL9 226 aa16.45■□□□□ 0.22
UPF3A-209ENST00000492270 EIF5A2Q9GZV4 153 aaKnown RBP16.45■□□□□ 0.22
UPF3A-209ENST00000492270 URGCP-MRPS24S4R325 110 aa16.45■□□□□ 0.22
UPF3A-209ENST00000492270 PCLOQ9Y6V0 5065 aa16.45■□□□□ 0.22
UPF3A-209ENST00000492270 TRBV6-8A0A0A6YYG3 113 aa16.44■□□□□ 0.22
UPF3A-209ENST00000492270 NTF3P20783 257 aa16.44■□□□□ 0.22
UPF3A-209ENST00000492270 SUMO4Q6EEV6 95 aa16.44■□□□□ 0.22
UPF3A-209ENST00000492270 CDPF1Q6NVV7 123 aa16.44■□□□□ 0.22
UPF3A-209ENST00000492270 FAM210AQ96ND0 272 aa16.44■□□□□ 0.22
UPF3A-209ENST00000492270 M0QY20 66 aa16.42■□□□□ 0.22
UPF3A-209ENST00000492270 KRTAP4-5Q9BYR2 181 aa16.42■□□□□ 0.22
UPF3A-209ENST00000492270 KLK12Q9UKR0 248 aa16.42■□□□□ 0.22
UPF3A-209ENST00000492270 A0A087WX48 190 aa16.41■□□□□ 0.22
UPF3A-209ENST00000492270 TRAV8-3A0A0A6YYJ7 113 aa16.41■□□□□ 0.22
UPF3A-209ENST00000492270 TRGC1P0CF51 173 aa16.41■□□□□ 0.22
UPF3A-209ENST00000492270 WFDC2Q14508 124 aa16.41■□□□□ 0.22
UPF3A-209ENST00000492270 NTM-AS1Q6ZSK4 140 aa16.41■□□□□ 0.22
UPF3A-209ENST00000492270 GTSF1Q8WW33 167 aa16.41■□□□□ 0.22
UPF3A-209ENST00000492270 MAPKAPK5-AS1Q8N8E1 139 aa16.4■□□□□ 0.22
UPF3A-209ENST00000492270 SMIM7Q9BQ49 75 aa16.4■□□□□ 0.22
UPF3A-209ENST00000492270 TM2D2Q9BX73 214 aa16.4■□□□□ 0.22
UPF3A-209ENST00000492270 CNFNQ9BYD5 112 aa16.4■□□□□ 0.22
UPF3A-209ENST00000492270 DPH3P1Q9H4G8 78 aa16.4■□□□□ 0.22
UPF3A-209ENST00000492270 GATCO43716 136 aaKnown RBP16.39■□□□□ 0.21
UPF3A-209ENST00000492270 SRP19P09132 144 aaKnown RBP16.39■□□□□ 0.21
UPF3A-209ENST00000492270 KRTAP10-1P60331 282 aa16.39■□□□□ 0.21
UPF3A-209ENST00000492270 WDR73Q6P4I2 378 aa16.39■□□□□ 0.21
UPF3A-209ENST00000492270 CHCHD7Q9BUK0 85 aa16.39■□□□□ 0.21
UPF3A-209ENST00000492270 TWIST1Q15672 202 aa16.38■□□□□ 0.21
UPF3A-209ENST00000492270 FAM231DQ6ZW35 169 aa16.38■□□□□ 0.21
UPF3A-209ENST00000492270 Q8N814 137 aa16.38■□□□□ 0.21
UPF3A-209ENST00000492270 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.38■□□□□ 0.21
UPF3A-209ENST00000492270 TMEM262E9PQX1 116 aa16.37■□□□□ 0.21
UPF3A-209ENST00000492270 H7C1H1 209 aa16.37■□□□□ 0.21
UPF3A-209ENST00000492270 MPV17L2Q567V2 206 aa16.37■□□□□ 0.21
UPF3A-209ENST00000492270 UBE2WQ96B02 151 aa16.37■□□□□ 0.21
UPF3A-209ENST00000492270 CHCHD5Q9BSY4 110 aa16.37■□□□□ 0.21
UPF3A-209ENST00000492270 KCNIP4Q6PIL6 250 aa16.36■□□□□ 0.21
UPF3A-209ENST00000492270 LINC01551Q86U37 167 aa16.36■□□□□ 0.21
UPF3A-209ENST00000492270 ZNF727A8MUV8 499 aa16.35■□□□□ 0.21
UPF3A-209ENST00000492270 LECT2O14960 151 aa16.35■□□□□ 0.21
UPF3A-209ENST00000492270 NDUFS6O75380 124 aaKnown RBP16.35■□□□□ 0.21
UPF3A-209ENST00000492270 RASL11AQ6T310 242 aa16.35■□□□□ 0.21
UPF3A-209ENST00000492270 IGKV2D-24A0A075B6R9 120 aa16.34■□□□□ 0.21
UPF3A-209ENST00000492270 IGLV5-52A0A0A0MRZ9 124 aa16.34■□□□□ 0.21
UPF3A-209ENST00000492270 TMEM97Q5BJF2 176 aa16.34■□□□□ 0.21
UPF3A-209ENST00000492270 ABCA13Q86UQ4 5058 aa16.33■□□□□ 0.21
UPF3A-209ENST00000492270 GCSHP23434 173 aa16.33■□□□□ 0.2
UPF3A-209ENST00000492270 FOXA3P55318 350 aaPredicted RBP16.33■□□□□ 0.2
UPF3A-209ENST00000492270 ELOBQ15370 118 aa16.33■□□□□ 0.2
UPF3A-209ENST00000492270 TEX261Q6UWH6 196 aa16.33■□□□□ 0.2
UPF3A-209ENST00000492270 C15orf54Q8N8G6 183 aa16.33■□□□□ 0.2
UPF3A-209ENST00000492270 Q8N976 141 aa16.33■□□□□ 0.2
UPF3A-209ENST00000492270 PGLYRP4Q96LB8 373 aa16.33■□□□□ 0.2
UPF3A-209ENST00000492270 TRAV26-2A0A0B4J265 109 aa16.32■□□□□ 0.2
UPF3A-209ENST00000492270 A8MWL6 223 aa16.32■□□□□ 0.2
UPF3A-209ENST00000492270 DEFB104AQ8WTQ1 72 aa16.32■□□□□ 0.2
UPF3A-209ENST00000492270 NTN5Q8WTR8 489 aaPredicted RBP16.32■□□□□ 0.2
UPF3A-209ENST00000492270 BAALCQ8WXS3 180 aa16.32■□□□□ 0.2
UPF3A-209ENST00000492270 RMI2Q96E14 147 aa16.32■□□□□ 0.2
UPF3A-209ENST00000492270 NIT2Q9NQR4 276 aa16.32■□□□□ 0.2
UPF3A-209ENST00000492270 TRBV25-1A0A075B6N4 114 aa16.31■□□□□ 0.2
UPF3A-209ENST00000492270 ANGP03950 147 aaKnown RBP16.31■□□□□ 0.2
UPF3A-209ENST00000492270 GAGE6Q13070 117 aa16.31■□□□□ 0.2
UPF3A-209ENST00000492270 CT83Q5H943 113 aa16.31■□□□□ 0.2
UPF3A-209ENST00000492270 ATRAIDQ6UW56 229 aa16.31■□□□□ 0.2
UPF3A-209ENST00000492270 ENHOQ6UWT2 76 aa16.31■□□□□ 0.2
UPF3A-209ENST00000492270 C9JQL5 133 aa16.3■□□□□ 0.2
UPF3A-209ENST00000492270 XGP55808 180 aa16.3■□□□□ 0.2
UPF3A-209ENST00000492270 IQCJQ1A5X6 159 aa16.3■□□□□ 0.2
UPF3A-209ENST00000492270 GATD1Q8NB37 220 aa16.3■□□□□ 0.2
UPF3A-209ENST00000492270 COX11Q9Y6N1 276 aa16.3■□□□□ 0.2
UPF3A-209ENST00000492270 IGHV1-24A0A0C4DH33 117 aa16.29■□□□□ 0.2
UPF3A-209ENST00000492270 SRSF3P84103 164 aaKnown RBP16.29■□□□□ 0.2
UPF3A-209ENST00000492270 Q8N1X5 172 aa16.29■□□□□ 0.2
UPF3A-209ENST00000492270 PKIAP61925 76 aa16.28■□□□□ 0.2
UPF3A-209ENST00000492270 RBX1P62877 108 aa16.28■□□□□ 0.2
UPF3A-209ENST00000492270 OSTCQ9NRP0 149 aa16.28■□□□□ 0.2
UPF3A-209ENST00000492270 CRPP02741 224 aa16.27■□□□□ 0.2
UPF3A-209ENST00000492270 Q0VG73 95 aa16.27■□□□□ 0.2
UPF3A-209ENST00000492270 IGLV2-33A0A075B6J2 118 aaPredicted RBP16.26■□□□□ 0.19
UPF3A-209ENST00000492270 CLPSL2Q6UWE3 100 aa16.26■□□□□ 0.19
UPF3A-209ENST00000492270 TSKUQ8WUA8 353 aa16.26■□□□□ 0.19
UPF3A-209ENST00000492270 RPL39LQ96EH5 51 aaKnown RBP16.26■□□□□ 0.19
UPF3A-209ENST00000492270 HIGD1CA8MV81 97 aa16.25■□□□□ 0.19
UPF3A-209ENST00000492270 SMIM15Q7Z3B0 74 aa16.25■□□□□ 0.19
UPF3A-209ENST00000492270 ISOC2Q96AB3 205 aa16.25■□□□□ 0.19
UPF3A-209ENST00000492270 C1orf43Q9BWL3 253 aa16.25■□□□□ 0.19
UPF3A-209ENST00000492270 RPL23P62829 140 aaKnown RBP16.24■□□□□ 0.19
UPF3A-209ENST00000492270 HAMPP81172 84 aa16.24■□□□□ 0.19
UPF3A-209ENST00000492270 TMEM241Q24JQ0 296 aa16.24■□□□□ 0.19
UPF3A-209ENST00000492270 V9GYV3 84 aa16.24■□□□□ 0.19
UPF3A-209ENST00000492270 FAM74A3Q4VXF1 159 aa16.23■□□□□ 0.19
UPF3A-209ENST00000492270 TMEM243Q9BU79 118 aa16.23■□□□□ 0.19
UPF3A-209ENST00000492270 GFRA4Q9GZZ7 299 aa16.23■□□□□ 0.19
UPF3A-209ENST00000492270 LINC00269Q8N2A0 174 aa16.22■□□□□ 0.19
UPF3A-209ENST00000492270 BORCS7Q96B45 105 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 1014.7 ms