RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 DAZ3Q9NR90 486 aaKnown RBP11.08□□□□□ -0.64
PDLIM2-217ENST00000491330 PKD1P98161 4303 aa11.08□□□□□ -0.64
PDLIM2-217ENST00000491330 LRCOL1A6NCL2 159 aa11.07□□□□□ -0.64
PDLIM2-217ENST00000491330 UBE2D3P61077 147 aa11.07□□□□□ -0.64
PDLIM2-217ENST00000491330 SSTP61278 116 aa11.07□□□□□ -0.64
PDLIM2-217ENST00000491330 UBE2D2P62837 147 aa11.07□□□□□ -0.64
PDLIM2-217ENST00000491330 Q8N976 141 aa11.07□□□□□ -0.64
PDLIM2-217ENST00000491330 KLK12Q9UKR0 248 aa11.07□□□□□ -0.64
PDLIM2-217ENST00000491330 IGKV2D-24A0A075B6R9 120 aa11.06□□□□□ -0.64
PDLIM2-217ENST00000491330 A0A1B0GVG6 124 aa11.06□□□□□ -0.64
PDLIM2-217ENST00000491330 TRGC1P0CF51 173 aa11.06□□□□□ -0.64
PDLIM2-217ENST00000491330 FUSP35637 526 aaKnown RBP eCLIP11.06□□□□□ -0.64
PDLIM2-217ENST00000491330 KRTAP10-1P60331 282 aa11.06□□□□□ -0.64
PDLIM2-217ENST00000491330 UBE2WQ96B02 151 aa11.06□□□□□ -0.64
PDLIM2-217ENST00000491330 FAM210AQ96ND0 272 aa11.06□□□□□ -0.64
PDLIM2-217ENST00000491330 TRBV6-8A0A0A6YYG3 113 aa11.05□□□□□ -0.64
PDLIM2-217ENST00000491330 C14orf177Q52M58 125 aa11.05□□□□□ -0.64
PDLIM2-217ENST00000491330 FAM231DQ6ZW35 169 aa11.05□□□□□ -0.64
PDLIM2-217ENST00000491330 CHCHD5Q9BSY4 110 aa11.05□□□□□ -0.64
PDLIM2-217ENST00000491330 EIF5A2Q9GZV4 153 aaKnown RBP11.05□□□□□ -0.64
PDLIM2-217ENST00000491330 SMDT1Q9H4I9 107 aa11.05□□□□□ -0.64
PDLIM2-217ENST00000491330 PKHD1P08F94 4074 aa11.05□□□□□ -0.64
PDLIM2-217ENST00000491330 NKX2-5P52952 324 aaPredicted RBP11.04□□□□□ -0.64
PDLIM2-217ENST00000491330 NUDT10Q8NFP7 164 aa11.04□□□□□ -0.64
PDLIM2-217ENST00000491330 NUDT11Q96G61 164 aa11.04□□□□□ -0.64
PDLIM2-217ENST00000491330 C1orf43Q9BWL3 253 aa11.04□□□□□ -0.64
PDLIM2-217ENST00000491330 CNFNQ9BYD5 112 aa11.04□□□□□ -0.64
PDLIM2-217ENST00000491330 RPP21Q9H633 154 aaKnown RBP11.04□□□□□ -0.64
PDLIM2-217ENST00000491330 MUC21A0A0G2JKD1 596 aa11.03□□□□□ -0.64
PDLIM2-217ENST00000491330 MUC21A0A140T8X8 626 aa11.03□□□□□ -0.64
PDLIM2-217ENST00000491330 CTRLP40313 264 aa11.03□□□□□ -0.64
PDLIM2-217ENST00000491330 CT83Q5H943 113 aa11.03□□□□□ -0.64
PDLIM2-217ENST00000491330 OCC1Q8TAD7 63 aa11.03□□□□□ -0.64
PDLIM2-217ENST00000491330 DNAJC30Q96LL9 226 aa11.03□□□□□ -0.64
PDLIM2-217ENST00000491330 KRTAP4-5Q9BYR2 181 aa11.03□□□□□ -0.64
PDLIM2-217ENST00000491330 Q9UF83 564 aa11.03□□□□□ -0.64
PDLIM2-217ENST00000491330 ANGP03950 147 aaKnown RBP11.02□□□□□ -0.65
PDLIM2-217ENST00000491330 MGPP08493 103 aa11.02□□□□□ -0.65
PDLIM2-217ENST00000491330 XGP55808 180 aa11.02□□□□□ -0.65
PDLIM2-217ENST00000491330 FAM74A3Q4VXF1 159 aa11.02□□□□□ -0.65
PDLIM2-217ENST00000491330 NEXN-AS1Q8NBZ9 246 aa11.02□□□□□ -0.65
PDLIM2-217ENST00000491330 KIF25-AS1Q9Y6Z4 181 aa11.02□□□□□ -0.65
PDLIM2-217ENST00000491330 TRBV25-1A0A075B6N4 114 aa11.01□□□□□ -0.65
PDLIM2-217ENST00000491330 A8MWL6 223 aa11.01□□□□□ -0.65
PDLIM2-217ENST00000491330 INAFM2P0DMQ5 153 aa11.01□□□□□ -0.65
PDLIM2-217ENST00000491330 TEX261Q6UWH6 196 aa11.01□□□□□ -0.65
PDLIM2-217ENST00000491330 SMIM15Q7Z3B0 74 aa11.01□□□□□ -0.65
PDLIM2-217ENST00000491330 BAALCQ8WXS3 180 aa11.01□□□□□ -0.65
PDLIM2-217ENST00000491330 FAM231BA6NCW3 169 aa11□□□□□ -0.65
PDLIM2-217ENST00000491330 K7EN84 100 aa11□□□□□ -0.65
PDLIM2-217ENST00000491330 SMIM7Q9BQ49 75 aa11□□□□□ -0.65
PDLIM2-217ENST00000491330 DPH3P1Q9H4G8 78 aa11□□□□□ -0.65
PDLIM2-217ENST00000491330 DYNC1H1Q14204 4646 aaKnown RBP11□□□□□ -0.65
PDLIM2-217ENST00000491330 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.99□□□□□ -0.65
PDLIM2-217ENST00000491330 LECT2O14960 151 aa10.99□□□□□ -0.65
PDLIM2-217ENST00000491330 FOXA3P55318 350 aaPredicted RBP10.99□□□□□ -0.65
PDLIM2-217ENST00000491330 Q5VSD8 79 aa10.99□□□□□ -0.65
PDLIM2-217ENST00000491330 LYZL1Q6UWQ5 148 aa10.99□□□□□ -0.65
PDLIM2-217ENST00000491330 Q8N3U1 123 aa10.99□□□□□ -0.65
PDLIM2-217ENST00000491330 C15orf54Q8N8G6 183 aa10.99□□□□□ -0.65
PDLIM2-217ENST00000491330 IGHV1-24A0A0C4DH33 117 aa10.98□□□□□ -0.65
PDLIM2-217ENST00000491330 ZNF727A8MUV8 499 aa10.98□□□□□ -0.65
PDLIM2-217ENST00000491330 GATCO43716 136 aaKnown RBP10.98□□□□□ -0.65
PDLIM2-217ENST00000491330 GZMBP10144 247 aa10.98□□□□□ -0.65
PDLIM2-217ENST00000491330 NTF3P20783 257 aa10.98□□□□□ -0.65
PDLIM2-217ENST00000491330 MIAQ16674 131 aa10.98□□□□□ -0.65
PDLIM2-217ENST00000491330 GFRA4Q9GZZ7 299 aa10.98□□□□□ -0.65
PDLIM2-217ENST00000491330 RNASE7Q9H1E1 156 aaKnown RBP10.98□□□□□ -0.65
PDLIM2-217ENST00000491330 PEA15Q15121 130 aa10.97□□□□□ -0.65
PDLIM2-217ENST00000491330 BORCS7Q96B45 105 aa10.97□□□□□ -0.65
PDLIM2-217ENST00000491330 M0QY20 66 aa10.96□□□□□ -0.65
PDLIM2-217ENST00000491330 SMR3BP02814 79 aaPredicted RBP10.96□□□□□ -0.65
PDLIM2-217ENST00000491330 SRP19P09132 144 aaKnown RBP10.96□□□□□ -0.65
PDLIM2-217ENST00000491330 RASL11AQ6T310 242 aa10.96□□□□□ -0.65
PDLIM2-217ENST00000491330 LINC01551Q86U37 167 aa10.96□□□□□ -0.65
PDLIM2-217ENST00000491330 OSTCQ9NRP0 149 aa10.96□□□□□ -0.65
PDLIM2-217ENST00000491330 UBE2L6O14933 153 aa10.95□□□□□ -0.66
PDLIM2-217ENST00000491330 PLA2G1BP04054 148 aaKnown RBP10.95□□□□□ -0.66
PDLIM2-217ENST00000491330 CEBPGP53567 150 aa10.95□□□□□ -0.66
PDLIM2-217ENST00000491330 TWIST1Q15672 202 aa10.95□□□□□ -0.66
PDLIM2-217ENST00000491330 ATRAIDQ6UW56 229 aa10.95□□□□□ -0.66
PDLIM2-217ENST00000491330 PCLOQ9Y6V0 5065 aa10.94□□□□□ -0.66
PDLIM2-217ENST00000491330 MPV17L2Q567V2 206 aa10.94□□□□□ -0.66
PDLIM2-217ENST00000491330 TSKUQ8WUA8 353 aa10.94□□□□□ -0.66
PDLIM2-217ENST00000491330 PGLYRP4Q96LB8 373 aa10.94□□□□□ -0.66
PDLIM2-217ENST00000491330 NIT2Q9NQR4 276 aa10.94□□□□□ -0.66
PDLIM2-217ENST00000491330 RYR1P21817 5038 aa10.94□□□□□ -0.66
PDLIM2-217ENST00000491330 GAGE6Q13070 117 aa10.93□□□□□ -0.66
PDLIM2-217ENST00000491330 IQCJQ1A5X6 159 aa10.93□□□□□ -0.66
PDLIM2-217ENST00000491330 TMEM241Q24JQ0 296 aa10.93□□□□□ -0.66
PDLIM2-217ENST00000491330 SUMO4Q6EEV6 95 aa10.93□□□□□ -0.66
PDLIM2-217ENST00000491330 TMEM243Q9BU79 118 aa10.93□□□□□ -0.66
PDLIM2-217ENST00000491330 HLA-DQA1P01909 254 aa10.92□□□□□ -0.66
PDLIM2-217ENST00000491330 COTL1Q14019 142 aa10.92□□□□□ -0.66
PDLIM2-217ENST00000491330 GTSF1Q8WW33 167 aa10.92□□□□□ -0.66
PDLIM2-217ENST00000491330 TRAV8-4A0A0B4J246 113 aa10.91□□□□□ -0.66
PDLIM2-217ENST00000491330 RBX1P62877 108 aa10.91□□□□□ -0.66
PDLIM2-217ENST00000491330 WFDC2Q14508 124 aa10.91□□□□□ -0.66
PDLIM2-217ENST00000491330 ENHOQ6UWT2 76 aa10.91□□□□□ -0.66
PDLIM2-217ENST00000491330 NAT8Q9UHE5 227 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms