RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 RASL11AQ6T310 242 aa10.92□□□□□ -0.66
TRA2A-208ENST00000490942 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.92□□□□□ -0.66
TRA2A-208ENST00000490942 BTF3L4Q96K17 158 aa10.92□□□□□ -0.66
TRA2A-208ENST00000490942 GTSF1LQ9H1H1 148 aa10.92□□□□□ -0.66
TRA2A-208ENST00000490942 GAGE12JA6NER3 117 aa10.91□□□□□ -0.66
TRA2A-208ENST00000490942 UBE2D3P61077 147 aa10.91□□□□□ -0.66
TRA2A-208ENST00000490942 UBE2D2P62837 147 aa10.91□□□□□ -0.66
TRA2A-208ENST00000490942 GAGE1Q13065 139 aa10.91□□□□□ -0.66
TRA2A-208ENST00000490942 GAGE4Q13068 117 aa10.91□□□□□ -0.66
TRA2A-208ENST00000490942 GAGE5Q13069 117 aa10.91□□□□□ -0.66
TRA2A-208ENST00000490942 GAGE13Q4V321 117 aa10.91□□□□□ -0.66
TRA2A-208ENST00000490942 NEXN-AS1Q8NBZ9 246 aa10.91□□□□□ -0.66
TRA2A-208ENST00000490942 KMT2CQ8NEZ4 4911 aaKnown RBP10.91□□□□□ -0.66
TRA2A-208ENST00000490942 APOC3P02656 99 aa10.9□□□□□ -0.66
TRA2A-208ENST00000490942 DAZ4Q86SG3 579 aaKnown RBP10.9□□□□□ -0.66
TRA2A-208ENST00000490942 ZNRF2Q8NHG8 242 aa10.9□□□□□ -0.66
TRA2A-208ENST00000490942 MRAP2Q96G30 205 aa10.9□□□□□ -0.66
TRA2A-208ENST00000490942 NIT2Q9NQR4 276 aa10.9□□□□□ -0.66
TRA2A-208ENST00000490942 DAZ3Q9NR90 486 aaKnown RBP10.9□□□□□ -0.66
TRA2A-208ENST00000490942 DNAH1Q9P2D7 4330 aa10.9□□□□□ -0.67
TRA2A-208ENST00000490942 K7EP13 123 aa10.89□□□□□ -0.67
TRA2A-208ENST00000490942 PPP1R17O96001 155 aa10.89□□□□□ -0.67
TRA2A-208ENST00000490942 RAB4AP20338 218 aa10.89□□□□□ -0.67
TRA2A-208ENST00000490942 TMEM97Q5BJF2 176 aa10.89□□□□□ -0.67
TRA2A-208ENST00000490942 Q9UF83 564 aa10.89□□□□□ -0.67
TRA2A-208ENST00000490942 TNFRSF18Q9Y5U5 241 aa10.89□□□□□ -0.67
TRA2A-208ENST00000490942 S100PP25815 95 aa10.88□□□□□ -0.67
TRA2A-208ENST00000490942 CAMPP49913 170 aa10.88□□□□□ -0.67
TRA2A-208ENST00000490942 LELP1Q5T871 98 aa10.88□□□□□ -0.67
TRA2A-208ENST00000490942 FAM104BQ5XKR9 115 aa10.88□□□□□ -0.67
TRA2A-208ENST00000490942 MRPL54Q6P161 138 aaKnown RBP10.88□□□□□ -0.67
TRA2A-208ENST00000490942 RNF185Q96GF1 192 aa10.88□□□□□ -0.67
TRA2A-208ENST00000490942 SACSQ9NZJ4 4579 aa10.87□□□□□ -0.67
TRA2A-208ENST00000490942 VPS13DQ5THJ4 4388 aa10.87□□□□□ -0.67
TRA2A-208ENST00000490942 TRBV6-5A0A0K0K1A5 114 aa10.87□□□□□ -0.67
TRA2A-208ENST00000490942 AMN1Q8IY45 258 aa10.87□□□□□ -0.67
TRA2A-208ENST00000490942 Q9H8V8 135 aa10.87□□□□□ -0.67
TRA2A-208ENST00000490942 RPS10P5Q9NQ39 176 aa10.87□□□□□ -0.67
TRA2A-208ENST00000490942 LYSTQ99698 3801 aa10.86□□□□□ -0.67
TRA2A-208ENST00000490942 TRAV8-6A0A0B4J262 113 aa10.86□□□□□ -0.67
TRA2A-208ENST00000490942 SLC7A5P1Q8MH63 180 aa10.86□□□□□ -0.67
TRA2A-208ENST00000490942 SIVA1O15304 175 aa10.85□□□□□ -0.67
TRA2A-208ENST00000490942 PPBPP02775 128 aa10.85□□□□□ -0.67
TRA2A-208ENST00000490942 BTF3P20290 206 aaKnown RBP10.85□□□□□ -0.67
TRA2A-208ENST00000490942 COX19Q49B96 90 aa10.85□□□□□ -0.67
TRA2A-208ENST00000490942 DNAH10OSP0CZ25 163 aa10.84□□□□□ -0.67
TRA2A-208ENST00000490942 TTC32Q5I0X7 151 aa10.84□□□□□ -0.67
TRA2A-208ENST00000490942 TRAV26-2A0A0B4J265 109 aa10.83□□□□□ -0.68
TRA2A-208ENST00000490942 MRPL51Q4U2R6 128 aaKnown RBP10.83□□□□□ -0.68
TRA2A-208ENST00000490942 OR10J3Q5JRS4 329 aa10.83□□□□□ -0.68
TRA2A-208ENST00000490942 Q6ZR54 194 aa10.83□□□□□ -0.68
TRA2A-208ENST00000490942 TRBV24-1A0A075B6N3 115 aa10.82□□□□□ -0.68
TRA2A-208ENST00000490942 TRBV6-8A0A0A6YYG3 113 aa10.82□□□□□ -0.68
TRA2A-208ENST00000490942 NBDYA0A0U1RRE5 68 aa10.82□□□□□ -0.68
TRA2A-208ENST00000490942 PHOX2AO14813 284 aa10.82□□□□□ -0.68
TRA2A-208ENST00000490942 PKIAP61925 76 aa10.82□□□□□ -0.68
TRA2A-208ENST00000490942 TRAV9-2A0A087WT02 112 aa10.81□□□□□ -0.68
TRA2A-208ENST00000490942 IGHV3-38A0A0C4DH36 116 aa10.81□□□□□ -0.68
TRA2A-208ENST00000490942 NCR2O95944 276 aa10.81□□□□□ -0.68
TRA2A-208ENST00000490942 LINC01556Q5JQF7 62 aa10.81□□□□□ -0.68
TRA2A-208ENST00000490942 RPL39LQ96EH5 51 aaKnown RBP10.81□□□□□ -0.68
TRA2A-208ENST00000490942 C20orf78Q9BR46 151 aa10.81□□□□□ -0.68
TRA2A-208ENST00000490942 CHCHD7Q9BUK0 85 aa10.81□□□□□ -0.68
TRA2A-208ENST00000490942 ST20Q9HBF5 79 aa10.81□□□□□ -0.68
TRA2A-208ENST00000490942 LAMTOR2Q9Y2Q5 125 aa10.81□□□□□ -0.68
TRA2A-208ENST00000490942 SDHAF1A6NFY7 115 aa10.8□□□□□ -0.68
TRA2A-208ENST00000490942 CKS2P33552 79 aa10.8□□□□□ -0.68
TRA2A-208ENST00000490942 RPL32P62910 135 aaKnown RBP10.8□□□□□ -0.68
TRA2A-208ENST00000490942 IQCJQ1A5X6 159 aa10.8□□□□□ -0.68
TRA2A-208ENST00000490942 WFDC10BQ8IUB3 73 aa10.8□□□□□ -0.68
TRA2A-208ENST00000490942 C10orf126Q8N4M7 172 aa10.8□□□□□ -0.68
TRA2A-208ENST00000490942 NRACQ8N912 160 aa10.8□□□□□ -0.68
TRA2A-208ENST00000490942 GNB1LQ9BYB4 327 aa10.8□□□□□ -0.68
TRA2A-208ENST00000490942 RYR2Q92736 4967 aa10.79□□□□□ -0.68
TRA2A-208ENST00000490942 TRBV25-1A0A075B6N4 114 aa10.79□□□□□ -0.68
TRA2A-208ENST00000490942 TRBV27A0A0K0K1C4 114 aa10.79□□□□□ -0.68
TRA2A-208ENST00000490942 HLA-DQA1P01909 254 aa10.79□□□□□ -0.68
TRA2A-208ENST00000490942 MT-ND6P03923 174 aa10.79□□□□□ -0.68
TRA2A-208ENST00000490942 RPS10P46783 165 aaKnown RBP10.79□□□□□ -0.68
TRA2A-208ENST00000490942 POLR2KP53803 58 aaKnown RBP10.79□□□□□ -0.68
TRA2A-208ENST00000490942 ORMDL3Q8N138 153 aa10.79□□□□□ -0.68
TRA2A-208ENST00000490942 TMEM70Q9BUB7 260 aa10.79□□□□□ -0.68
TRA2A-208ENST00000490942 URGCP-MRPS24S4R325 110 aa10.79□□□□□ -0.68
TRA2A-208ENST00000490942 I3L3M4 83 aa10.78□□□□□ -0.68
TRA2A-208ENST00000490942 SUMO2P61956 95 aaKnown RBP10.78□□□□□ -0.68
TRA2A-208ENST00000490942 COTL1Q14019 142 aa10.78□□□□□ -0.68
TRA2A-208ENST00000490942 TMEM136Q6ZRR5 245 aa10.78□□□□□ -0.68
TRA2A-208ENST00000490942 NTM-AS1Q6ZSK4 140 aa10.78□□□□□ -0.68
TRA2A-208ENST00000490942 DNAH6Q9C0G6 4158 aa10.77□□□□□ -0.69
TRA2A-208ENST00000490942 IGLV2-18A0A075B6J9 118 aa10.77□□□□□ -0.69
TRA2A-208ENST00000490942 IGHV1-24A0A0C4DH33 117 aa10.77□□□□□ -0.69
TRA2A-208ENST00000490942 D6R8Y8 96 aa10.77□□□□□ -0.69
TRA2A-208ENST00000490942 VCYO14598 125 aa10.77□□□□□ -0.69
TRA2A-208ENST00000490942 GAS8-AS1O95177 125 aa10.77□□□□□ -0.69
TRA2A-208ENST00000490942 ELOBQ15370 118 aa10.77□□□□□ -0.69
TRA2A-208ENST00000490942 NIT1Q86X76 327 aa10.77□□□□□ -0.69
TRA2A-208ENST00000490942 LCE2BO14633 110 aa10.76□□□□□ -0.69
TRA2A-208ENST00000490942 TCAPO15273 167 aa10.76□□□□□ -0.69
TRA2A-208ENST00000490942 TNFRSF6BO95407 300 aa10.76□□□□□ -0.69
TRA2A-208ENST00000490942 SMCO4Q9NRQ5 59 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms