RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 RBMY1FQ15415 496 aaKnown RBP13.98□□□□□ -0.17
CCM2-216ENST00000488727 SLC25A34Q6PIV7 304 aa13.98□□□□□ -0.17
CCM2-216ENST00000488727 POM121L12Q8N7R1 296 aa13.98□□□□□ -0.17
CCM2-216ENST00000488727 PMCHL2Q9BQD1 86 aa13.98□□□□□ -0.17
CCM2-216ENST00000488727 C7orf71A4D174 169 aa13.98□□□□□ -0.17
CCM2-216ENST00000488727 M0R381 172 aa13.98□□□□□ -0.17
CCM2-216ENST00000488727 C1orf158Q8N1D5 194 aa13.98□□□□□ -0.17
CCM2-216ENST00000488727 TRAV26-2A0A0B4J265 109 aa13.97□□□□□ -0.17
CCM2-216ENST00000488727 GNRH2O43555 120 aa13.97□□□□□ -0.17
CCM2-216ENST00000488727 BATFQ16520 125 aa13.97□□□□□ -0.17
CCM2-216ENST00000488727 AP1S3Q96PC3 154 aa13.97□□□□□ -0.17
CCM2-216ENST00000488727 TCAPO15273 167 aa13.96□□□□□ -0.17
CCM2-216ENST00000488727 INSP01308 110 aa13.96□□□□□ -0.17
CCM2-216ENST00000488727 FAM159AQ6UWV7 190 aa13.96□□□□□ -0.17
CCM2-216ENST00000488727 LAGE3Q14657 143 aa13.95□□□□□ -0.18
CCM2-216ENST00000488727 OR11H2Q8NH07 326 aa13.95□□□□□ -0.18
CCM2-216ENST00000488727 C20orf78Q9BR46 151 aa13.95□□□□□ -0.18
CCM2-216ENST00000488727 SMIM2Q9BVW6 85 aa13.95□□□□□ -0.18
CCM2-216ENST00000488727 X6R8D5 127 aa13.95□□□□□ -0.18
CCM2-216ENST00000488727 IGHV3OR16-12A0A075B7B8 117 aa13.95□□□□□ -0.18
CCM2-216ENST00000488727 COX8AP10176 69 aa13.95□□□□□ -0.18
CCM2-216ENST00000488727 MUC4Q99102 2169 aa13.94□□□□□ -0.18
CCM2-216ENST00000488727 K7EMI3 77 aa13.94□□□□□ -0.18
CCM2-216ENST00000488727 STPG4Q8N801 248 aa13.94□□□□□ -0.18
CCM2-216ENST00000488727 RASL10AQ92737 203 aa13.94□□□□□ -0.18
CCM2-216ENST00000488727 ATP5LO75964 103 aa13.93□□□□□ -0.18
CCM2-216ENST00000488727 PPP1R17O96001 155 aa13.93□□□□□ -0.18
CCM2-216ENST00000488727 C14orf178Q8N769 122 aaPredicted RBP13.93□□□□□ -0.18
CCM2-216ENST00000488727 STAB2Q8WWQ8 2551 aa13.93□□□□□ -0.18
CCM2-216ENST00000488727 TRAV12-3A0A0B4J271 114 aa13.93□□□□□ -0.18
CCM2-216ENST00000488727 KIF25-AS1Q9Y6Z4 181 aa13.93□□□□□ -0.18
CCM2-216ENST00000488727 SUMO2P61956 95 aaKnown RBP13.92□□□□□ -0.18
CCM2-216ENST00000488727 C9orf85Q96MD7 179 aa13.92□□□□□ -0.18
CCM2-216ENST00000488727 C18orf15Q96N68 181 aa13.92□□□□□ -0.18
CCM2-216ENST00000488727 PRM2P04554 102 aa13.91□□□□□ -0.18
CCM2-216ENST00000488727 ODF1Q14990 250 aa13.91□□□□□ -0.18
CCM2-216ENST00000488727 ANKRD39Q53RE8 183 aa13.91□□□□□ -0.18
CCM2-216ENST00000488727 TMEM208Q9BTX3 173 aa13.91□□□□□ -0.18
CCM2-216ENST00000488727 SMIM17P0DL12 118 aa13.9□□□□□ -0.18
CCM2-216ENST00000488727 HINT1P49773 126 aaPredicted RBP13.9□□□□□ -0.18
CCM2-216ENST00000488727 ORMDL2Q53FV1 153 aa13.9□□□□□ -0.18
CCM2-216ENST00000488727 Q8NAQ8 132 aa13.9□□□□□ -0.18
CCM2-216ENST00000488727 TP73-AS1Q9UF72 201 aa13.9□□□□□ -0.18
CCM2-216ENST00000488727 IGHV3-16A0A0C4DH30 117 aa13.9□□□□□ -0.18
CCM2-216ENST00000488727 MGPP08493 103 aa13.9□□□□□ -0.18
CCM2-216ENST00000488727 LINC00315P59091 139 aa13.9□□□□□ -0.18
CCM2-216ENST00000488727 RPL32P62910 135 aaKnown RBP13.9□□□□□ -0.18
CCM2-216ENST00000488727 FGF6P10767 208 aa13.89□□□□□ -0.19
CCM2-216ENST00000488727 LINC01587Q99440 93 aa13.89□□□□□ -0.19
CCM2-216ENST00000488727 DKK2Q9UBU2 259 aa13.89□□□□□ -0.19
CCM2-216ENST00000488727 IGHV1OR15-1A0A075B7D0 117 aa13.88□□□□□ -0.19
CCM2-216ENST00000488727 IGHV4-28A0A0C4DH34 117 aa13.88□□□□□ -0.19
CCM2-216ENST00000488727 DEFB4AO15263 64 aa13.88□□□□□ -0.19
CCM2-216ENST00000488727 MIFP14174 115 aa13.88□□□□□ -0.19
CCM2-216ENST00000488727 DLEU1O43261 78 aa13.87□□□□□ -0.19
CCM2-216ENST00000488727 RPL39LQ96EH5 51 aaKnown RBP13.87□□□□□ -0.19
CCM2-216ENST00000488727 A0A0J9YWU9 116 aa13.87□□□□□ -0.19
CCM2-216ENST00000488727 PRSS1P07477 247 aa13.87□□□□□ -0.19
CCM2-216ENST00000488727 ZNF25P17030 456 aaPredicted RBP13.87□□□□□ -0.19
CCM2-216ENST00000488727 GAGE1Q13065 139 aa13.87□□□□□ -0.19
CCM2-216ENST00000488727 C2orf91Q6ZV80 131 aa13.87□□□□□ -0.19
CCM2-216ENST00000488727 BOD1L2Q8IYS8 172 aa13.87□□□□□ -0.19
CCM2-216ENST00000488727 SMIM9A6NGZ8 99 aa13.86□□□□□ -0.19
CCM2-216ENST00000488727 NUDT3O95989 172 aa13.86□□□□□ -0.19
CCM2-216ENST00000488727 HTN1P15515 57 aa13.86□□□□□ -0.19
CCM2-216ENST00000488727 AZU1P20160 251 aa13.86□□□□□ -0.19
CCM2-216ENST00000488727 EDA2RQ9HAV5 297 aa13.86□□□□□ -0.19
CCM2-216ENST00000488727 RRN3P1Q2M238 152 aa13.85□□□□□ -0.19
CCM2-216ENST00000488727 SYT8Q8NBV8 401 aa13.85□□□□□ -0.19
CCM2-216ENST00000488727 TOMM6Q96B49 74 aa13.85□□□□□ -0.19
CCM2-216ENST00000488727 IGKCP01834 107 aa13.84□□□□□ -0.19
CCM2-216ENST00000488727 MPV17L2Q567V2 206 aa13.84□□□□□ -0.19
CCM2-216ENST00000488727 BVES-AS1Q5T3Y7 98 aa13.84□□□□□ -0.19
CCM2-216ENST00000488727 C11orf68Q9H3H3 251 aaKnown RBP13.84□□□□□ -0.19
CCM2-216ENST00000488727 TRGV11A0A075B6L2 103 aa13.84□□□□□ -0.19
CCM2-216ENST00000488727 TRAV12-1A0A0B4J245 112 aa13.84□□□□□ -0.19
CCM2-216ENST00000488727 SIVA1O15304 175 aa13.84□□□□□ -0.19
CCM2-216ENST00000488727 DPM2O94777 84 aa13.84□□□□□ -0.19
CCM2-216ENST00000488727 SUMO4Q6EEV6 95 aa13.83□□□□□ -0.2
CCM2-216ENST00000488727 HHLA3Q9XRX5 114 aa13.83□□□□□ -0.2
CCM2-216ENST00000488727 A0A087WX48 190 aa13.82□□□□□ -0.2
CCM2-216ENST00000488727 PLAC8L1A1L4L8 177 aa13.82□□□□□ -0.2
CCM2-216ENST00000488727 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.82□□□□□ -0.2
CCM2-216ENST00000488727 G0S2P27469 103 aa13.82□□□□□ -0.2
CCM2-216ENST00000488727 RNASE8Q8TDE3 154 aaKnown RBP13.82□□□□□ -0.2
CCM2-216ENST00000488727 LINC00467Q9BRT7 94 aa13.82□□□□□ -0.2
CCM2-216ENST00000488727 MDFICQ9P1T7 246 aa13.82□□□□□ -0.2
CCM2-216ENST00000488727 TRBV6-5A0A0K0K1A5 114 aa13.81□□□□□ -0.2
CCM2-216ENST00000488727 JPT2Q9H910 190 aa13.81□□□□□ -0.2
CCM2-216ENST00000488727 LINC01549A6NIU2 74 aa13.81□□□□□ -0.2
CCM2-216ENST00000488727 POLR2KP53803 58 aaKnown RBP13.81□□□□□ -0.2
CCM2-216ENST00000488727 EMP1P54849 157 aa13.81□□□□□ -0.2
CCM2-216ENST00000488727 TMEM263Q8WUH6 116 aaKnown RBP13.81□□□□□ -0.2
CCM2-216ENST00000488727 ORAOV1Q8WV07 137 aa13.81□□□□□ -0.2
CCM2-216ENST00000488727 C16orf74Q96GX8 76 aa13.79□□□□□ -0.2
CCM2-216ENST00000488727 SCGB3A1Q96QR1 104 aa13.79□□□□□ -0.2
CCM2-216ENST00000488727 MRPL35Q9NZE8 188 aaKnown RBP13.79□□□□□ -0.2
CCM2-216ENST00000488727 CELA1Q9UNI1 258 aa13.79□□□□□ -0.2
CCM2-216ENST00000488727 COX11Q9Y6N1 276 aa13.79□□□□□ -0.2
CCM2-216ENST00000488727 A0A087WWL8 130 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms