RNA–Protein interactions for RNA: ENST00000487163.5

USP21-208, Transcript of ubiquitin specific peptidase 21, humanhuman

TSL 1 (best)

Gene USP21, Length 2,514 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP21-208ENST00000487163 DLX4Q92988 240 aaPredicted RBP12.38□□□□□ -0.43
USP21-208ENST00000487163 PRADC1Q9BSG0 188 aa12.38□□□□□ -0.43
USP21-208ENST00000487163 TM2D2Q9BX73 214 aa12.38□□□□□ -0.43
USP21-208ENST00000487163 CST9LQ9H4G1 147 aa12.38□□□□□ -0.43
USP21-208ENST00000487163 NIPBLQ6KC79 2804 aaeCLIP12.37□□□□□ -0.43
USP21-208ENST00000487163 A0A1W2PPM0 123 aa12.37□□□□□ -0.43
USP21-208ENST00000487163 RBMY1BA6NDE4 496 aaKnown RBP12.37□□□□□ -0.43
USP21-208ENST00000487163 RBMY1EA6NEQ0 496 aaKnown RBP12.37□□□□□ -0.43
USP21-208ENST00000487163 C11orf86A6NJI1 115 aa12.37□□□□□ -0.43
USP21-208ENST00000487163 RBMY1DP0C7P1 496 aaKnown RBP12.37□□□□□ -0.43
USP21-208ENST00000487163 CD300EQ496F6 205 aaPredicted RBP12.37□□□□□ -0.43
USP21-208ENST00000487163 MTORP42345 2549 aa12.37□□□□□ -0.43
USP21-208ENST00000487163 IGLV4-69A0A075B6H9 119 aa12.37□□□□□ -0.43
USP21-208ENST00000487163 IGHV3-73A0A0B4J1V6 119 aa12.37□□□□□ -0.43
USP21-208ENST00000487163 TRBV6-5A0A0K0K1A5 114 aa12.37□□□□□ -0.43
USP21-208ENST00000487163 MYMXA0A1B0GTQ4 84 aa12.37□□□□□ -0.43
USP21-208ENST00000487163 KLHL30-AS1Q8NEE0 82 aa12.37□□□□□ -0.43
USP21-208ENST00000487163 WFDC11Q8NEX6 87 aa12.37□□□□□ -0.43
USP21-208ENST00000487163 HIST1H4GQ99525 98 aa12.37□□□□□ -0.43
USP21-208ENST00000487163 GTF2H5Q6ZYL4 71 aa12.36□□□□□ -0.43
USP21-208ENST00000487163 E9PLD3 99 aa12.36□□□□□ -0.43
USP21-208ENST00000487163 H3BMM0 161 aa12.36□□□□□ -0.43
USP21-208ENST00000487163 K7EP34 96 aa12.36□□□□□ -0.43
USP21-208ENST00000487163 SAMD5Q5TGI4 173 aa12.36□□□□□ -0.43
USP21-208ENST00000487163 C11orf44Q8N8P7 122 aa12.36□□□□□ -0.43
USP21-208ENST00000487163 PHLDA1Q8WV24 401 aaPredicted RBP12.36□□□□□ -0.43
USP21-208ENST00000487163 OPRPNQ99935 248 aaPredicted RBP12.36□□□□□ -0.43
USP21-208ENST00000487163 SPCS1Q9Y6A9 102 aa12.35□□□□□ -0.43
USP21-208ENST00000487163 TRGV11A0A075B6L2 103 aa12.35□□□□□ -0.43
USP21-208ENST00000487163 PROK1P58294 105 aa12.35□□□□□ -0.43
USP21-208ENST00000487163 PMVKQ15126 192 aa12.35□□□□□ -0.43
USP21-208ENST00000487163 C4orf3Q8WVX3 66 aa12.35□□□□□ -0.43
USP21-208ENST00000487163 RIPPLY3P57055 190 aa12.34□□□□□ -0.43
USP21-208ENST00000487163 P0DMU3 169 aa12.34□□□□□ -0.43
USP21-208ENST00000487163 FAM231AP0DMU4 169 aa12.34□□□□□ -0.43
USP21-208ENST00000487163 FAM231CP0DMU5 169 aa12.34□□□□□ -0.43
USP21-208ENST00000487163 RNF151Q2KHN1 245 aa12.34□□□□□ -0.43
USP21-208ENST00000487163 TRPT1Q86TN4 253 aaKnown RBP12.34□□□□□ -0.43
USP21-208ENST00000487163 PEMTQ9UBM1 199 aa12.34□□□□□ -0.43
USP21-208ENST00000487163 PDZD2O15018 2839 aa12.33□□□□□ -0.44
USP21-208ENST00000487163 ZNF815PA8K554 130 aa12.33□□□□□ -0.44
USP21-208ENST00000487163 Q6ZSV7 163 aa12.33□□□□□ -0.44
USP21-208ENST00000487163 DYNLRB2Q8TF09 96 aa12.33□□□□□ -0.44
USP21-208ENST00000487163 TIMM17AQ99595 171 aa12.33□□□□□ -0.44
USP21-208ENST00000487163 NACAE9PAV3 2078 aa12.33□□□□□ -0.44
USP21-208ENST00000487163 TRBV7-3A0A075B6L6 115 aa12.33□□□□□ -0.44
USP21-208ENST00000487163 OCIAD2Q56VL3 154 aa12.33□□□□□ -0.44
USP21-208ENST00000487163 FABP2P12104 132 aa12.32□□□□□ -0.44
USP21-208ENST00000487163 SCGB2A2Q13296 93 aa12.32□□□□□ -0.44
USP21-208ENST00000487163 ZNRF2Q8NHG8 242 aa12.32□□□□□ -0.44
USP21-208ENST00000487163 PLEKHB2Q96CS7 222 aa12.32□□□□□ -0.44
USP21-208ENST00000487163 TMEM141Q96I45 108 aa12.32□□□□□ -0.44
USP21-208ENST00000487163 MAP6D1Q9H9H5 199 aa12.32□□□□□ -0.44
USP21-208ENST00000487163 TAL2Q16559 108 aa12.32□□□□□ -0.44
USP21-208ENST00000487163 Q9UF83 564 aa12.31□□□□□ -0.44
USP21-208ENST00000487163 A0A1W2PRX2 142 aa12.31□□□□□ -0.44
USP21-208ENST00000487163 C12orf74Q32Q52 190 aa12.31□□□□□ -0.44
USP21-208ENST00000487163 TMEM170BQ5T4T1 132 aa12.31□□□□□ -0.44
USP21-208ENST00000487163 SCGB1D4Q6XE38 83 aa12.31□□□□□ -0.44
USP21-208ENST00000487163 DEFB114Q30KQ6 69 aa12.3□□□□□ -0.44
USP21-208ENST00000487163 DNAJC9-AS1A6NH13 148 aa12.3□□□□□ -0.44
USP21-208ENST00000487163 LINC01549A6NIU2 74 aa12.3□□□□□ -0.44
USP21-208ENST00000487163 NSUN5P1Q3KNT7 163 aa12.3□□□□□ -0.44
USP21-208ENST00000487163 A8MTW9 85 aa12.29□□□□□ -0.44
USP21-208ENST00000487163 I3L3M4 83 aa12.29□□□□□ -0.44
USP21-208ENST00000487163 SPAG8Q99932 426 aaPredicted RBP12.29□□□□□ -0.44
USP21-208ENST00000487163 SAP30O75446 220 aa12.28□□□□□ -0.44
USP21-208ENST00000487163 TSPEAR-AS2P59090 65 aa12.28□□□□□ -0.44
USP21-208ENST00000487163 C20orf203Q8NBC4 194 aa12.28□□□□□ -0.44
USP21-208ENST00000487163 ESM1Q9NQ30 184 aa12.28□□□□□ -0.44
USP21-208ENST00000487163 IGLL5B9A064 214 aa12.28□□□□□ -0.44
USP21-208ENST00000487163 RHOHQ15669 191 aa12.28□□□□□ -0.44
USP21-208ENST00000487163 PAPPA-AS1Q5QFB9 102 aa12.28□□□□□ -0.44
USP21-208ENST00000487163 UNC79Q9P2D8 2635 aa12.27□□□□□ -0.44
USP21-208ENST00000487163 NOTCH3Q9UM47 2321 aa12.27□□□□□ -0.44
USP21-208ENST00000487163 RAX2Q96IS3 184 aa12.27□□□□□ -0.45
USP21-208ENST00000487163 LINC01587Q99440 93 aa12.27□□□□□ -0.45
USP21-208ENST00000487163 HECTD1Q9ULT8 2610 aa12.27□□□□□ -0.45
USP21-208ENST00000487163 HERVK_113P61574 105 aa12.27□□□□□ -0.45
USP21-208ENST00000487163 Q6ZSN1 163 aa12.27□□□□□ -0.45
USP21-208ENST00000487163 GCN1Q92616 2671 aaKnown RBP12.26□□□□□ -0.45
USP21-208ENST00000487163 TRAV2A0A0B4J234 112 aa12.26□□□□□ -0.45
USP21-208ENST00000487163 M0R2P5 195 aa12.26□□□□□ -0.45
USP21-208ENST00000487163 OR5A1Q8NGJ0 315 aa12.26□□□□□ -0.45
USP21-208ENST00000487163 FASNP49327 2511 aaKnown RBP12.26□□□□□ -0.45
USP21-208ENST00000487163 ZNF479Q96JC4 524 aa12.26□□□□□ -0.45
USP21-208ENST00000487163 KMT2BQ9UMN6 2715 aaPredicted RBP12.25□□□□□ -0.45
USP21-208ENST00000487163 NOTCH2Q04721 2471 aa12.25□□□□□ -0.45
USP21-208ENST00000487163 SRSF9Q13242 221 aaKnown RBP eCLIP12.25□□□□□ -0.45
USP21-208ENST00000487163 ZNF415Q09FC8 603 aa12.25□□□□□ -0.45
USP21-208ENST00000487163 MRPL16Q9NX20 251 aaKnown RBP12.25□□□□□ -0.45
USP21-208ENST00000487163 XCL2Q9UBD3 114 aa12.25□□□□□ -0.45
USP21-208ENST00000487163 CD28P10747 220 aa12.24□□□□□ -0.45
USP21-208ENST00000487163 ODF3L2Q3SX64 289 aa12.24□□□□□ -0.45
USP21-208ENST00000487163 CEMP1Q6PRD7 247 aaPredicted RBP12.24□□□□□ -0.45
USP21-208ENST00000487163 TMEM86BQ8N661 226 aa12.24□□□□□ -0.45
USP21-208ENST00000487163 IGLV4-3A0A075B6K6 122 aa12.24□□□□□ -0.45
USP21-208ENST00000487163 IGHV3-64A0A075B6Q5 118 aa12.24□□□□□ -0.45
USP21-208ENST00000487163 C11orf72Q8NBR9 251 aa12.24□□□□□ -0.45
USP21-208ENST00000487163 A0A0J9YY99 117 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms